RNA–Protein interactions for RNA: ENST00000380416.5

PMS2-202, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 2

Gene PMS2, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-202ENST00000380416 SBK1Q52WX2 424 aa10.4□□□□□ -0.74
PMS2-202ENST00000380416 CATSPERGQ6ZRH7 1159 aa10.4□□□□□ -0.74
PMS2-202ENST00000380416 SMC5Q8IY18 1101 aa10.4□□□□□ -0.74
PMS2-202ENST00000380416 KHSRPQ92945 711 aaKnown RBP eCLIP10.4□□□□□ -0.74
PMS2-202ENST00000380416 TANGO6Q9C0B7 1094 aa10.4□□□□□ -0.74
PMS2-202ENST00000380416 PRDM12Q9H4Q4 367 aa10.4□□□□□ -0.74
PMS2-202ENST00000380416 RPAP3Q9H6T3 665 aaPredicted RBP10.4□□□□□ -0.74
PMS2-202ENST00000380416 ZNF287Q9HBT7 754 aa10.4□□□□□ -0.74
PMS2-202ENST00000380416 CWC22Q9HCG8 908 aaKnown RBP10.4□□□□□ -0.74
PMS2-202ENST00000380416 EPB41L4AQ9HCS5 686 aaPredicted RBP10.4□□□□□ -0.74
PMS2-202ENST00000380416 PDLIM7Q9NR12 457 aa10.4□□□□□ -0.74
PMS2-202ENST00000380416 PCDHGA10Q9Y5H3 936 aa10.4□□□□□ -0.74
PMS2-202ENST00000380416 MYO9BQ13459 2157 aa10.4□□□□□ -0.74
PMS2-202ENST00000380416 MYH4Q9Y623 1939 aa10.4□□□□□ -0.74
PMS2-202ENST00000380416 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.39□□□□□ -0.75
PMS2-202ENST00000380416 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.39□□□□□ -0.75
PMS2-202ENST00000380416 PATL2C9JE40 543 aaKnown RBP10.39□□□□□ -0.75
PMS2-202ENST00000380416 SMIM22K7EJ46 135 aa10.39□□□□□ -0.75
PMS2-202ENST00000380416 SLC3A2P08195 630 aaKnown RBP10.39□□□□□ -0.75
PMS2-202ENST00000380416 XRCC5P13010 732 aaKnown RBP10.39□□□□□ -0.75
PMS2-202ENST00000380416 MAPK4P31152 587 aa10.39□□□□□ -0.75
PMS2-202ENST00000380416 EPHB4P54760 987 aa10.39□□□□□ -0.75
PMS2-202ENST00000380416 ERVK-9P63128 1117 aa10.39□□□□□ -0.75
PMS2-202ENST00000380416 ERVK-24P63145 666 aa10.39□□□□□ -0.75
PMS2-202ENST00000380416 CCNA1P78396 465 aa10.39□□□□□ -0.75
PMS2-202ENST00000380416 FOXK2Q01167 660 aa10.39□□□□□ -0.75
PMS2-202ENST00000380416 ATP2B2Q01814 1243 aa10.39□□□□□ -0.75
PMS2-202ENST00000380416 TFF2Q03403 129 aa10.39□□□□□ -0.75
PMS2-202ENST00000380416 MAP2K5Q13163 448 aa10.39□□□□□ -0.75
PMS2-202ENST00000380416 AAK1Q2M2I8 961 aa10.39□□□□□ -0.75
PMS2-202ENST00000380416 ZMYM1Q5SVZ6 1142 aa10.39□□□□□ -0.75
PMS2-202ENST00000380416 CHD1LQ86WJ1 897 aa10.39□□□□□ -0.75
PMS2-202ENST00000380416 CLEC10AQ8IUN9 316 aa10.39□□□□□ -0.75
PMS2-202ENST00000380416 STK11IPQ8N1F8 1099 aa10.39□□□□□ -0.75
PMS2-202ENST00000380416 KRI1Q8N9T8 703 aaKnown RBP10.39□□□□□ -0.75
PMS2-202ENST00000380416 SOCS4Q8WXH5 440 aa10.39□□□□□ -0.75
PMS2-202ENST00000380416 LPAR1Q92633 364 aa10.39□□□□□ -0.75
PMS2-202ENST00000380416 SEC62Q99442 399 aaKnown RBP10.39□□□□□ -0.75
PMS2-202ENST00000380416 NAPBQ9H115 298 aa10.39□□□□□ -0.75
PMS2-202ENST00000380416 KANSL2Q9H9L4 492 aa10.39□□□□□ -0.75
PMS2-202ENST00000380416 MKNK2Q9HBH9 465 aa10.39□□□□□ -0.75
PMS2-202ENST00000380416 TXNRD2Q9NNW7 524 aa10.39□□□□□ -0.75
PMS2-202ENST00000380416 PRDM5Q9NQX1 630 aaPredicted RBP10.39□□□□□ -0.75
PMS2-202ENST00000380416 PARP14Q460N5 1801 aa10.39□□□□□ -0.75
PMS2-202ENST00000380416 CFAP54Q96N23 3096 aa10.39□□□□□ -0.75
PMS2-202ENST00000380416 A0A0G2JMZ2 1700 aa10.38□□□□□ -0.75
PMS2-202ENST00000380416 A0A1W2PRG0 241 aa10.38□□□□□ -0.75
PMS2-202ENST00000380416 PRR33A8MZF0 331 aa10.38□□□□□ -0.75
PMS2-202ENST00000380416 TRIM6-TRIM34B2RNG4 842 aa10.38□□□□□ -0.75
PMS2-202ENST00000380416 DNM1LO00429 736 aa10.38□□□□□ -0.75
PMS2-202ENST00000380416 CYP2B6P20813 491 aa10.38□□□□□ -0.75
PMS2-202ENST00000380416 NUCB1Q02818 461 aa10.38□□□□□ -0.75
PMS2-202ENST00000380416 SNX17Q15036 470 aa10.38□□□□□ -0.75
PMS2-202ENST00000380416 TRMT44Q8IYL2 757 aaKnown RBP10.38□□□□□ -0.75
PMS2-202ENST00000380416 IFNL3Q8IZI9 196 aa10.38□□□□□ -0.75
PMS2-202ENST00000380416 VCPKMTQ9H867 229 aa10.38□□□□□ -0.75
PMS2-202ENST00000380416 ZSWIM6Q9HCJ5 1215 aa10.38□□□□□ -0.75
PMS2-202ENST00000380416 GOPCQ9HD26 462 aa10.38□□□□□ -0.75
PMS2-202ENST00000380416 NPDC1Q9NQX5 325 aaPredicted RBP10.38□□□□□ -0.75
PMS2-202ENST00000380416 RBPJLQ9UBG7 517 aa10.38□□□□□ -0.75
PMS2-202ENST00000380416 ATP11BQ9Y2G3 1177 aa10.38□□□□□ -0.75
PMS2-202ENST00000380416 TMX2Q9Y320 296 aa10.38□□□□□ -0.75
PMS2-202ENST00000380416 RABGAP1Q9Y3P9 1069 aa10.38□□□□□ -0.75
PMS2-202ENST00000380416 TRIM43BA6NCK2 446 aa10.37□□□□□ -0.75
PMS2-202ENST00000380416 WDR46O15213 610 aaKnown RBP10.37□□□□□ -0.75
PMS2-202ENST00000380416 RAD21O60216 631 aa10.37□□□□□ -0.75
PMS2-202ENST00000380416 PEX10O60683 326 aa10.37□□□□□ -0.75
PMS2-202ENST00000380416 FLOT1O75955 427 aa10.37□□□□□ -0.75
PMS2-202ENST00000380416 IGHDP01880 384 aa10.37□□□□□ -0.75
PMS2-202ENST00000380416 EEF2P13639 858 aaKnown RBP10.37□□□□□ -0.75
PMS2-202ENST00000380416 ZKSCAN1P17029 563 aaPredicted RBP10.37□□□□□ -0.75
PMS2-202ENST00000380416 RASA1P20936 1047 aa10.37□□□□□ -0.75
PMS2-202ENST00000380416 PDE4BQ07343 736 aa10.37□□□□□ -0.75
PMS2-202ENST00000380416 WDR78Q5VTH9 848 aa10.37□□□□□ -0.75
PMS2-202ENST00000380416 LBX2Q6XYB7 198 aa10.37□□□□□ -0.75
PMS2-202ENST00000380416 CCDC129Q6ZRS4 1044 aa10.37□□□□□ -0.75
PMS2-202ENST00000380416 GPR142Q7Z601 462 aa10.37□□□□□ -0.75
PMS2-202ENST00000380416 SH3RF1Q7Z6J0 888 aa10.37□□□□□ -0.75
PMS2-202ENST00000380416 PLEKHH3Q7Z736 793 aa10.37□□□□□ -0.75
PMS2-202ENST00000380416 ZNF444Q8N0Y2 327 aaPredicted RBP10.37□□□□□ -0.75
PMS2-202ENST00000380416 SPICE1Q8N0Z3 855 aa10.37□□□□□ -0.75
PMS2-202ENST00000380416 RILPL2Q969X0 211 aa10.37□□□□□ -0.75
PMS2-202ENST00000380416 RNF166Q96A37 237 aaPredicted RBP10.37□□□□□ -0.75
PMS2-202ENST00000380416 TRIM43Q96BQ3 446 aaPredicted RBP10.37□□□□□ -0.75
PMS2-202ENST00000380416 NUDT12Q9BQG2 462 aa10.37□□□□□ -0.75
PMS2-202ENST00000380416 HELLSQ9NRZ9 838 aa10.37□□□□□ -0.75
PMS2-202ENST00000380416 HOXC10Q9NYD6 342 aa10.37□□□□□ -0.75
PMS2-202ENST00000380416 COL11A1P12107 1806 aaPredicted RBP10.36□□□□□ -0.75
PMS2-202ENST00000380416 PI4K2BG5E9Z4 385 aa10.36□□□□□ -0.75
PMS2-202ENST00000380416 CNMDO75829 334 aa10.36□□□□□ -0.75
PMS2-202ENST00000380416 HOXB1P14653 301 aaPredicted RBP10.36□□□□□ -0.75
PMS2-202ENST00000380416 FECHP22830 423 aa10.36□□□□□ -0.75
PMS2-202ENST00000380416 ITGB8P26012 769 aa10.36□□□□□ -0.75
PMS2-202ENST00000380416 FOSBP53539 338 aa10.36□□□□□ -0.75
PMS2-202ENST00000380416 IRX6P78412 446 aaPredicted RBP10.36□□□□□ -0.75
PMS2-202ENST00000380416 PPARAQ07869 468 aa10.36□□□□□ -0.75
PMS2-202ENST00000380416 COG2Q14746 738 aa10.36□□□□□ -0.75
PMS2-202ENST00000380416 Q3C1V9 767 aa10.36□□□□□ -0.75
PMS2-202ENST00000380416 TICAM2Q86XR7 235 aa10.36□□□□□ -0.75
PMS2-202ENST00000380416 MB21D1Q8N884 522 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms