RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 USP31Q70CQ4 1352 aa10.37□□□□□ -0.75
PTPRA-204ENST00000380393 HNRNPCP07910 306 aaKnown RBP eCLIP10.37□□□□□ -0.75
PTPRA-204ENST00000380393 MTF1Q14872 753 aa10.37□□□□□ -0.75
PTPRA-204ENST00000380393 ADCK5Q3MIX3 580 aa10.37□□□□□ -0.75
PTPRA-204ENST00000380393 TBC1D1Q86TI0 1168 aaPredicted RBP10.37□□□□□ -0.75
PTPRA-204ENST00000380393 SENP2Q9HC62 589 aa10.37□□□□□ -0.75
PTPRA-204ENST00000380393 CYP46A1Q9Y6A2 500 aa10.37□□□□□ -0.75
PTPRA-204ENST00000380393 ATP10DQ9P241 1426 aa10.37□□□□□ -0.75
PTPRA-204ENST00000380393 TRIM21P19474 475 aaKnown RBP10.37□□□□□ -0.75
PTPRA-204ENST00000380393 USP46P62068 366 aa10.37□□□□□ -0.75
PTPRA-204ENST00000380393 APBA1Q02410 837 aa10.37□□□□□ -0.75
PTPRA-204ENST00000380393 FAM160A1Q05DH4 1040 aa10.37□□□□□ -0.75
PTPRA-204ENST00000380393 LACTB2Q53H82 288 aaPredicted RBP10.37□□□□□ -0.75
PTPRA-204ENST00000380393 SMUG1Q53HV7 270 aa10.37□□□□□ -0.75
PTPRA-204ENST00000380393 APBB1IPQ7Z5R6 666 aaPredicted RBP10.37□□□□□ -0.75
PTPRA-204ENST00000380393 TTC30AQ86WT1 665 aa10.37□□□□□ -0.75
PTPRA-204ENST00000380393 SMC1BQ8NDV3 1235 aa10.37□□□□□ -0.75
PTPRA-204ENST00000380393 MPHOSPH6Q99547 160 aaKnown RBP10.37□□□□□ -0.75
PTPRA-204ENST00000380393 DMAP1Q9NPF5 467 aaPredicted RBP10.37□□□□□ -0.75
PTPRA-204ENST00000380393 PEAK1Q9H792 1746 aa10.37□□□□□ -0.75
PTPRA-204ENST00000380393 UBAP1LF5GYI3 381 aa10.36□□□□□ -0.75
PTPRA-204ENST00000380393 FLT3P36888 993 aa10.36□□□□□ -0.75
PTPRA-204ENST00000380393 ANO7Q6IWH7 933 aa10.36□□□□□ -0.75
PTPRA-204ENST00000380393 CACNA2D3Q8IZS8 1091 aa10.36□□□□□ -0.75
PTPRA-204ENST00000380393 FNBP4Q8N3X1 1017 aaPredicted RBP10.36□□□□□ -0.75
PTPRA-204ENST00000380393 GOLPH3LQ9H4A5 285 aa10.36□□□□□ -0.75
PTPRA-204ENST00000380393 OSBPL3Q9H4L5 887 aa10.36□□□□□ -0.75
PTPRA-204ENST00000380393 HSF2BPO75031 334 aa10.36□□□□□ -0.75
PTPRA-204ENST00000380393 MYCLP1P12525 358 aaPredicted RBP10.36□□□□□ -0.75
PTPRA-204ENST00000380393 HOXD11P31277 338 aaPredicted RBP10.36□□□□□ -0.75
PTPRA-204ENST00000380393 OXCT1P55809 520 aa10.36□□□□□ -0.75
PTPRA-204ENST00000380393 TMEM154Q6P9G4 183 aa10.36□□□□□ -0.75
PTPRA-204ENST00000380393 KDM7AQ6ZMT4 941 aa10.36□□□□□ -0.75
PTPRA-204ENST00000380393 SLC15A3Q8IY34 581 aa10.36□□□□□ -0.75
PTPRA-204ENST00000380393 ERMNQ8TAM6 284 aa10.36□□□□□ -0.75
PTPRA-204ENST00000380393 NR1H4Q96RI1 486 aaPredicted RBP10.36□□□□□ -0.75
PTPRA-204ENST00000380393 TAOK3Q9H2K8 898 aa10.36□□□□□ -0.75
PTPRA-204ENST00000380393 TSPYL4Q9UJ04 414 aa10.36□□□□□ -0.75
PTPRA-204ENST00000380393 A0A0U1RQJ8 604 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 FLOT1O75955 427 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 CCND1P24385 295 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 CCNI2Q6ZMN8 369 aaPredicted RBP10.35□□□□□ -0.75
PTPRA-204ENST00000380393 HINFPQ9BQA5 517 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 FAM184BQ9ULE4 1060 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 SPATA31A3Q5VYP0 1347 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 ADCY9O60503 1353 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 H3BQV1 296 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 ABLIM1O14639 778 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 EPB41P11171 864 aaKnown RBP10.35□□□□□ -0.75
PTPRA-204ENST00000380393 MDH1P40925 334 aaKnown RBP10.35□□□□□ -0.75
PTPRA-204ENST00000380393 RFC5P40937 340 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 LBRQ14739 615 aaKnown RBP10.35□□□□□ -0.75
PTPRA-204ENST00000380393 P3H1Q32P28 736 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 IFFO2Q5TF58 517 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 ALS2CLQ60I27 953 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 LARP1Q6PKG0 1096 aaKnown RBP10.35□□□□□ -0.75
PTPRA-204ENST00000380393 C14orf80Q86SX3 495 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 RRP36Q96EU6 259 aaKnown RBP10.35□□□□□ -0.75
PTPRA-204ENST00000380393 VCX3BQ9H321 246 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 VCX3AQ9NNX9 186 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 P4HA2O15460 535 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 NR1D1P20393 614 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 HOXD12P35452 270 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 MLH1P40692 756 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 PPARDQ03181 441 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 NCAPHQ15003 741 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 ZNF365Q70YC5 407 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 ARHGEF25Q86VW2 580 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 SPICE1Q8N0Z3 855 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 FSIP1Q8NA03 581 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 RPS6KC1Q96S38 1066 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 TCHPQ9BT92 498 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 NDST4Q9H3R1 872 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 CFAP45Q9UL16 551 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 SPO11Q9Y5K1 396 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 ANKRD26Q9UPS8 1709 aa10.35□□□□□ -0.75
PTPRA-204ENST00000380393 NUTM2BA6NNL0 878 aaPredicted RBP10.34□□□□□ -0.75
PTPRA-204ENST00000380393 NUTM2EB1AL46 878 aaPredicted RBP10.34□□□□□ -0.75
PTPRA-204ENST00000380393 LDHAP00338 332 aaKnown RBP10.34□□□□□ -0.75
PTPRA-204ENST00000380393 MMEP08473 750 aa10.34□□□□□ -0.75
PTPRA-204ENST00000380393 CCDC166P0CW27 439 aa10.34□□□□□ -0.75
PTPRA-204ENST00000380393 NUTM2AQ8IVF1 878 aaPredicted RBP10.34□□□□□ -0.75
PTPRA-204ENST00000380393 SEC16BQ96JE7 1060 aa10.34□□□□□ -0.75
PTPRA-204ENST00000380393 DUSP9Q99956 384 aaKnown RBP10.34□□□□□ -0.75
PTPRA-204ENST00000380393 SLF1Q9BQI6 1058 aa10.34□□□□□ -0.75
PTPRA-204ENST00000380393 DLGAP2Q9P1A6 1054 aa10.34□□□□□ -0.75
PTPRA-204ENST00000380393 LEMD3Q9Y2U8 911 aa10.34□□□□□ -0.75
PTPRA-204ENST00000380393 TARSL2A2RTX5 802 aaKnown RBP10.34□□□□□ -0.75
PTPRA-204ENST00000380393 TRIM43BA6NCK2 446 aa10.34□□□□□ -0.75
PTPRA-204ENST00000380393 RAB11FIP3O75154 756 aa10.34□□□□□ -0.75
PTPRA-204ENST00000380393 MYL6BP14649 208 aa10.34□□□□□ -0.75
PTPRA-204ENST00000380393 ATP2A2P16615 1042 aaKnown RBP10.34□□□□□ -0.75
PTPRA-204ENST00000380393 SP100P23497 879 aaPredicted RBP10.34□□□□□ -0.75
PTPRA-204ENST00000380393 CCT4P50991 539 aaKnown RBP10.34□□□□□ -0.75
PTPRA-204ENST00000380393 ST3GAL1Q11201 340 aa10.34□□□□□ -0.75
PTPRA-204ENST00000380393 TRIM50Q86XT4 487 aa10.34□□□□□ -0.75
PTPRA-204ENST00000380393 PALB2Q86YC2 1186 aa10.34□□□□□ -0.75
PTPRA-204ENST00000380393 CNTROBQ8N137 903 aa10.34□□□□□ -0.75
PTPRA-204ENST00000380393 LZICQ8WZA0 190 aa10.34□□□□□ -0.75
PTPRA-204ENST00000380393 P3H4Q92791 437 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms