RNA–Protein interactions for RNA: ENST00000380150.2

CDKN2A-202, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-202ENST00000380150 ZNF287Q9HBT7 754 aa24■■□□□ 1.43
CDKN2A-202ENST00000380150 STARD7Q9NQZ5 370 aa24■■□□□ 1.43
CDKN2A-202ENST00000380150 ISY1Q9ULR0 285 aaKnown RBP24■■□□□ 1.43
CDKN2A-202ENST00000380150 PRUNE2Q8WUY3 3088 aa24■■□□□ 1.43
CDKN2A-202ENST00000380150 RAG1P15918 1043 aa23.99■■□□□ 1.43
CDKN2A-202ENST00000380150 PDE4BQ07343 736 aa23.99■■□□□ 1.43
CDKN2A-202ENST00000380150 CCDC144BQ3MJ40 725 aa23.99■■□□□ 1.43
CDKN2A-202ENST00000380150 ARMCX2Q7L311 632 aa23.99■■□□□ 1.43
CDKN2A-202ENST00000380150 NACAP1Q9BZK3 213 aa23.99■■□□□ 1.43
CDKN2A-202ENST00000380150 KATNBL1Q9H079 304 aa23.99■■□□□ 1.43
CDKN2A-202ENST00000380150 SEMA6BQ9H3T3 888 aa23.99■■□□□ 1.43
CDKN2A-202ENST00000380150 TMEM39AQ9NV64 488 aa23.99■■□□□ 1.43
CDKN2A-202ENST00000380150 MCM3APO60318 1980 aa23.99■■□□□ 1.43
CDKN2A-202ENST00000380150 ZNF536O15090 1300 aa23.99■■□□□ 1.43
CDKN2A-202ENST00000380150 SALL3Q9BXA9 1300 aa23.99■■□□□ 1.43
CDKN2A-202ENST00000380150 ERC2O15083 957 aa23.98■■□□□ 1.43
CDKN2A-202ENST00000380150 DUSP11O75319 330 aaKnown RBP23.98■■□□□ 1.43
CDKN2A-202ENST00000380150 C6orf222P0C671 652 aaPredicted RBP23.98■■□□□ 1.43
CDKN2A-202ENST00000380150 MX1P20591 662 aa23.98■■□□□ 1.43
CDKN2A-202ENST00000380150 PTGS1P23219 599 aa23.98■■□□□ 1.43
CDKN2A-202ENST00000380150 MCCP23508 829 aa23.98■■□□□ 1.43
CDKN2A-202ENST00000380150 VPS53Q5VIR6 699 aa23.98■■□□□ 1.43
CDKN2A-202ENST00000380150 ANKRD33Q7Z3H0 272 aa23.98■■□□□ 1.43
CDKN2A-202ENST00000380150 CCDC144CPQ8IYA2 1237 aa23.98■■□□□ 1.43
CDKN2A-202ENST00000380150 CHST13Q8NET6 341 aa23.98■■□□□ 1.43
CDKN2A-202ENST00000380150 IL17RBQ9NRM6 502 aa23.98■■□□□ 1.43
CDKN2A-202ENST00000380150 SYNPO2Q9UMS6 1093 aa23.98■■□□□ 1.43
CDKN2A-202ENST00000380150 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.98■■□□□ 1.43
CDKN2A-202ENST00000380150 OAZ1P54368 228 aa23.97■■□□□ 1.43
CDKN2A-202ENST00000380150 KCTD1Q719H9 257 aa23.97■■□□□ 1.43
CDKN2A-202ENST00000380150 RNPC3Q96LT9 517 aaKnown RBP23.97■■□□□ 1.43
CDKN2A-202ENST00000380150 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.96■■□□□ 1.43
CDKN2A-202ENST00000380150 SOWAHBA6NEL2 793 aa23.96■■□□□ 1.43
CDKN2A-202ENST00000380150 MOXD2PA6NHM9 499 aa23.96■■□□□ 1.43
CDKN2A-202ENST00000380150 CTAGE5O15320 804 aa23.96■■□□□ 1.43
CDKN2A-202ENST00000380150 ASGR1P07306 291 aa23.96■■□□□ 1.43
CDKN2A-202ENST00000380150 STAT2P52630 851 aa23.96■■□□□ 1.43
CDKN2A-202ENST00000380150 SMAD3P84022 425 aaKnown RBP23.96■■□□□ 1.43
CDKN2A-202ENST00000380150 LRRFIP1Q32MZ4 808 aaKnown RBP23.96■■□□□ 1.43
CDKN2A-202ENST00000380150 NUP133Q8WUM0 1156 aa23.96■■□□□ 1.43
CDKN2A-202ENST00000380150 ABHD16BQ9H3Z7 469 aa23.96■■□□□ 1.43
CDKN2A-202ENST00000380150 A1CFQ9NQ94 594 aaKnown RBP23.96■■□□□ 1.43
CDKN2A-202ENST00000380150 FBXO40Q9UH90 709 aa23.96■■□□□ 1.43
CDKN2A-202ENST00000380150 VCANP13611 3396 aa23.96■■□□□ 1.43
CDKN2A-202ENST00000380150 ASTN1O14525 1302 aa23.95■■□□□ 1.42
CDKN2A-202ENST00000380150 SLC1A4P43007 532 aa23.95■■□□□ 1.42
CDKN2A-202ENST00000380150 FPGSQ05932 587 aa23.95■■□□□ 1.42
CDKN2A-202ENST00000380150 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.95■■□□□ 1.42
CDKN2A-202ENST00000380150 FAM133AQ8N9E0 248 aa23.95■■□□□ 1.42
CDKN2A-202ENST00000380150 MYLIPQ8WY64 445 aa23.95■■□□□ 1.42
CDKN2A-202ENST00000380150 GMCL1Q96IK5 515 aa23.95■■□□□ 1.42
CDKN2A-202ENST00000380150 TOX2Q96NM4 488 aa23.95■■□□□ 1.42
CDKN2A-202ENST00000380150 UPF3AQ9H1J1 476 aaKnown RBP23.95■■□□□ 1.42
CDKN2A-202ENST00000380150 RNF146Q9NTX7 359 aa23.95■■□□□ 1.42
CDKN2A-202ENST00000380150 STX8Q9UNK0 236 aa23.95■■□□□ 1.42
CDKN2A-202ENST00000380150 MTMR7Q9Y216 660 aa23.95■■□□□ 1.42
CDKN2A-202ENST00000380150 DCDC2CA8MYV0 355 aa23.94■■□□□ 1.42
CDKN2A-202ENST00000380150 SLC3A2P08195 630 aaKnown RBP23.94■■□□□ 1.42
CDKN2A-202ENST00000380150 CST5P28325 142 aaPredicted RBP23.94■■□□□ 1.42
CDKN2A-202ENST00000380150 CDK7P50613 346 aa23.94■■□□□ 1.42
CDKN2A-202ENST00000380150 GJA9P57773 515 aa23.94■■□□□ 1.42
CDKN2A-202ENST00000380150 BEX3Q00994 111 aa23.94■■□□□ 1.42
CDKN2A-202ENST00000380150 IKQ13123 557 aaPredicted RBP23.94■■□□□ 1.42
CDKN2A-202ENST00000380150 CCDC174Q6PII3 467 aa23.94■■□□□ 1.42
CDKN2A-202ENST00000380150 STAG1Q8WVM7 1258 aa23.94■■□□□ 1.42
CDKN2A-202ENST00000380150 COL25A1Q9BXS0 654 aaPredicted RBP23.94■■□□□ 1.42
CDKN2A-202ENST00000380150 ACAD9Q9H845 621 aa23.94■■□□□ 1.42
CDKN2A-202ENST00000380150 TBX21Q9UL17 535 aa23.94■■□□□ 1.42
CDKN2A-202ENST00000380150 TSPY2A6NKD2 308 aa23.93■■□□□ 1.42
CDKN2A-202ENST00000380150 MUM1L1Q5H9M0 696 aa23.93■■□□□ 1.42
CDKN2A-202ENST00000380150 GNASQ5JWF2 1037 aa23.93■■□□□ 1.42
CDKN2A-202ENST00000380150 TMEM63BQ5T3F8 832 aa23.93■■□□□ 1.42
CDKN2A-202ENST00000380150 GLT1D1Q96MS3 346 aa23.93■■□□□ 1.42
CDKN2A-202ENST00000380150 PURBQ96QR8 312 aaKnown RBP23.93■■□□□ 1.42
CDKN2A-202ENST00000380150 ALAS1P13196 640 aa23.92■■□□□ 1.42
CDKN2A-202ENST00000380150 FAM160B2Q86V87 743 aa23.92■■□□□ 1.42
CDKN2A-202ENST00000380150 CHURC1Q8WUH1 139 aa23.92■■□□□ 1.42
CDKN2A-202ENST00000380150 VTI1AQ96AJ9 217 aa23.92■■□□□ 1.42
CDKN2A-202ENST00000380150 TRERF1Q96PN7 1200 aa23.92■■□□□ 1.42
CDKN2A-202ENST00000380150 PRR12Q9ULL5 1215 aa23.92■■□□□ 1.42
CDKN2A-202ENST00000380150 ELP1O95163 1332 aa23.91■■□□□ 1.42
CDKN2A-202ENST00000380150 TIMP1P01033 207 aa23.91■■□□□ 1.42
CDKN2A-202ENST00000380150 RRP1P56182 461 aaKnown RBP23.91■■□□□ 1.42
CDKN2A-202ENST00000380150 ANKRD45Q5TZF3 282 aa23.91■■□□□ 1.42
CDKN2A-202ENST00000380150 RCSD1Q6JBY9 416 aa23.91■■□□□ 1.42
CDKN2A-202ENST00000380150 C16orf59Q7L2K0 433 aa23.91■■□□□ 1.42
CDKN2A-202ENST00000380150 CRBNQ96SW2 442 aa23.91■■□□□ 1.42
CDKN2A-202ENST00000380150 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.91■■□□□ 1.42
CDKN2A-202ENST00000380150 LRRC37A2A6NM11 1700 aa23.9■■□□□ 1.42
CDKN2A-202ENST00000380150 RANBP6O60518 1105 aaKnown RBP23.9■■□□□ 1.42
CDKN2A-202ENST00000380150 FDX1P10109 184 aa23.9■■□□□ 1.42
CDKN2A-202ENST00000380150 TTBK2Q6IQ55 1244 aa23.9■■□□□ 1.42
CDKN2A-202ENST00000380150 PCSK9Q8NBP7 692 aaKnown RBP23.9■■□□□ 1.42
CDKN2A-202ENST00000380150 MAFAQ8NHW3 353 aaPredicted RBP23.9■■□□□ 1.42
CDKN2A-202ENST00000380150 FAM227BQ96M60 508 aa23.9■■□□□ 1.42
CDKN2A-202ENST00000380150 PDGFCQ9NRA1 345 aa23.9■■□□□ 1.42
CDKN2A-202ENST00000380150 CUL9Q8IWT3 2517 aa23.89■■□□□ 1.42
CDKN2A-202ENST00000380150 ARVCFO00192 962 aa23.89■■□□□ 1.41
CDKN2A-202ENST00000380150 TNFAIP2Q03169 654 aa23.89■■□□□ 1.41
CDKN2A-202ENST00000380150 EEPD1Q7L9B9 569 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms