RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 INPP5BP32019 993 aa7.33□□□□□ -1.24
NEDD9-202ENST00000379446 MRPS9P82933 396 aaKnown RBP7.33□□□□□ -1.24
NEDD9-202ENST00000379446 PTPN12Q05209 780 aaKnown RBP7.33□□□□□ -1.24
NEDD9-202ENST00000379446 NAA30Q147X3 362 aaPredicted RBP7.33□□□□□ -1.24
NEDD9-202ENST00000379446 STXBP2Q15833 593 aa7.33□□□□□ -1.24
NEDD9-202ENST00000379446 ADCK5Q3MIX3 580 aa7.33□□□□□ -1.24
NEDD9-202ENST00000379446 LONRF3Q496Y0 759 aa7.33□□□□□ -1.24
NEDD9-202ENST00000379446 XKR9Q5GH70 373 aa7.33□□□□□ -1.24
NEDD9-202ENST00000379446 FAM160B2Q86V87 743 aa7.33□□□□□ -1.24
NEDD9-202ENST00000379446 SH3TC2Q8TF17 1288 aa7.33□□□□□ -1.24
NEDD9-202ENST00000379446 ZC3H15Q8WU90 426 aaKnown RBP7.33□□□□□ -1.24
NEDD9-202ENST00000379446 DPF2Q92785 391 aa7.33□□□□□ -1.24
NEDD9-202ENST00000379446 DYNLL2Q96FJ2 89 aa7.33□□□□□ -1.24
NEDD9-202ENST00000379446 PRIMPOLQ96LW4 560 aa7.33□□□□□ -1.24
NEDD9-202ENST00000379446 hCG_1642624A0A1W2PR95 340 aa7.33□□□□□ -1.24
NEDD9-202ENST00000379446 KRT17Q04695 432 aa7.33□□□□□ -1.24
NEDD9-202ENST00000379446 MKRN4PQ13434 485 aaPredicted RBP7.33□□□□□ -1.24
NEDD9-202ENST00000379446 FAM177A1Q8N128 213 aaPredicted RBP7.33□□□□□ -1.24
NEDD9-202ENST00000379446 FAM151AQ8WW52 585 aa7.33□□□□□ -1.24
NEDD9-202ENST00000379446 PRMT6Q96LA8 375 aaPredicted RBP7.33□□□□□ -1.24
NEDD9-202ENST00000379446 ACAD9Q9H845 621 aa7.33□□□□□ -1.24
NEDD9-202ENST00000379446 SMC2O95347 1197 aa7.33□□□□□ -1.24
NEDD9-202ENST00000379446 TBC1D8BQ0IIM8 1120 aa7.33□□□□□ -1.24
NEDD9-202ENST00000379446 CUL4AQ13619 759 aa7.33□□□□□ -1.24
NEDD9-202ENST00000379446 KLHL10Q6JEL2 608 aa7.33□□□□□ -1.24
NEDD9-202ENST00000379446 CC2D1AQ6P1N0 951 aaPredicted RBP7.33□□□□□ -1.24
NEDD9-202ENST00000379446 HS2ST1Q7LGA3 356 aa7.33□□□□□ -1.24
NEDD9-202ENST00000379446 GLYCTKQ8IVS8 523 aa7.33□□□□□ -1.24
NEDD9-202ENST00000379446 HERC5Q9UII4 1024 aaKnown RBP7.33□□□□□ -1.24
NEDD9-202ENST00000379446 SUPT20HL2P0C7V6 817 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 TOP1P11387 765 aaKnown RBP7.32□□□□□ -1.24
NEDD9-202ENST00000379446 ELNP15502 786 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 VEGFBP49765 207 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 AMPD3Q01432 767 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 BFSP2Q13515 415 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 CREB3L3Q68CJ9 461 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 PDXDC2PQ6P474 469 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 TPH2Q8IWU9 490 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 RDH13Q8NBN7 331 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 PSTPIP2Q9H939 334 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 SH2B1Q9NRF2 756 aaPredicted RBP7.32□□□□□ -1.24
NEDD9-202ENST00000379446 AAASQ9NRG9 546 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 VIRMAQ69YN4 1812 aaKnown RBP7.32□□□□□ -1.24
NEDD9-202ENST00000379446 SIGLEC1Q9BZZ2 1709 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 MAP2P11137 1827 aaKnown RBP7.32□□□□□ -1.24
NEDD9-202ENST00000379446 PPARAQ07869 468 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 FILIP1LQ4L180 1135 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 ARMCX5Q6P1M9 558 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 PI16Q6UXB8 463 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 PNMA1Q8ND90 353 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 URGCPQ8TCY9 931 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 SLC7A3Q8WY07 619 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 CDHR1Q96JP9 859 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 DEF6Q9H4E7 631 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 ATP8A2Q9NTI2 1148 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 STAP2Q9UGK3 403 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 V9GY48 417 aaPredicted RBP7.32□□□□□ -1.24
NEDD9-202ENST00000379446 PTPRUQ92729 1446 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 CCDC171Q6TFL3 1326 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 CCDC40Q4G0X9 1142 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 LIN9Q5TKA1 542 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 CLEC17AQ6ZS10 378 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 PLA2G4DQ86XP0 818 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 RPUSD2Q8IZ73 545 aaKnown RBP7.32□□□□□ -1.24
NEDD9-202ENST00000379446 TMEM199Q8N511 208 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 PRPF38AQ8NAV1 312 aaKnown RBP7.32□□□□□ -1.24
NEDD9-202ENST00000379446 TRPM4Q8TD43 1214 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 RMDN3Q96TC7 470 aa7.32□□□□□ -1.24
NEDD9-202ENST00000379446 SEPT9Q9UHD8 586 aaPredicted RBP7.32□□□□□ -1.24
NEDD9-202ENST00000379446 KLRF2D3W0D1 207 aa7.31□□□□□ -1.24
NEDD9-202ENST00000379446 GPR25O00155 361 aa7.31□□□□□ -1.24
NEDD9-202ENST00000379446 CCND2P30279 289 aa7.31□□□□□ -1.24
NEDD9-202ENST00000379446 FLT3LGP49771 235 aa7.31□□□□□ -1.24
NEDD9-202ENST00000379446 FKBP1BP68106 108 aa7.31□□□□□ -1.24
NEDD9-202ENST00000379446 PAN2Q504Q3 1202 aaKnown RBP7.31□□□□□ -1.24
NEDD9-202ENST00000379446 PRR16Q569H4 304 aa7.31□□□□□ -1.24
NEDD9-202ENST00000379446 NBPF10Q6P3W6 841 aaKnown RBP7.31□□□□□ -1.24
NEDD9-202ENST00000379446 SCYL3Q8IZE3 742 aa7.31□□□□□ -1.24
NEDD9-202ENST00000379446 PLIN2Q99541 437 aa7.31□□□□□ -1.24
NEDD9-202ENST00000379446 MED10Q9BTT4 135 aa7.31□□□□□ -1.24
NEDD9-202ENST00000379446 LSG1Q9H089 658 aaKnown RBP7.31□□□□□ -1.24
NEDD9-202ENST00000379446 XPNPEP3Q9NQH7 507 aa7.31□□□□□ -1.24
NEDD9-202ENST00000379446 ENTPD7Q9NQZ7 604 aa7.31□□□□□ -1.24
NEDD9-202ENST00000379446 DACT1Q9NYF0 836 aa7.31□□□□□ -1.24
NEDD9-202ENST00000379446 BEND3Q5T5X7 828 aa7.31□□□□□ -1.24
NEDD9-202ENST00000379446 ZNF697Q5TEC3 545 aa7.31□□□□□ -1.24
NEDD9-202ENST00000379446 TAF3Q5VWG9 929 aa7.31□□□□□ -1.24
NEDD9-202ENST00000379446 TMC7Q7Z402 723 aa7.31□□□□□ -1.24
NEDD9-202ENST00000379446 EXOC8Q8IYI6 725 aa7.31□□□□□ -1.24
NEDD9-202ENST00000379446 SHCBP1Q8NEM2 672 aa7.31□□□□□ -1.24
NEDD9-202ENST00000379446 SH3RF3Q8TEJ3 882 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-202ENST00000379446 NLRP4Q96MN2 994 aa7.31□□□□□ -1.24
NEDD9-202ENST00000379446 NUP88Q99567 741 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-202ENST00000379446 TEX13BQ9BXU2 312 aa7.31□□□□□ -1.24
NEDD9-202ENST00000379446 CERS4Q9HA82 394 aa7.31□□□□□ -1.24
NEDD9-202ENST00000379446 CREBZFQ9NS37 354 aa7.31□□□□□ -1.24
NEDD9-202ENST00000379446 LMCD1Q9NZU5 365 aa7.31□□□□□ -1.24
NEDD9-202ENST00000379446 RGS12O14924 1447 aa7.31□□□□□ -1.24
NEDD9-202ENST00000379446 YBX3P16989 372 aaKnown RBP eCLIP7.31□□□□□ -1.24
NEDD9-202ENST00000379446 PTGS1P23219 599 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms