RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 PRPF38BQ5VTL8 546 aaKnown RBP13.87□□□□□ -0.19
PCNA-201ENST00000379143 MICU3Q86XE3 530 aa13.87□□□□□ -0.19
PCNA-201ENST00000379143 RIOX2Q8IUF8 465 aa13.87□□□□□ -0.19
PCNA-201ENST00000379143 STAG2Q8N3U4 1231 aa13.87□□□□□ -0.19
PCNA-201ENST00000379143 COA7Q96BR5 231 aa13.87□□□□□ -0.19
PCNA-201ENST00000379143 MYL10Q9BUA6 226 aa13.87□□□□□ -0.19
PCNA-201ENST00000379143 UBA5Q9GZZ9 404 aa13.87□□□□□ -0.19
PCNA-201ENST00000379143 MROH8Q9H579 483 aa13.87□□□□□ -0.19
PCNA-201ENST00000379143 EFCC1Q9HA90 598 aa13.87□□□□□ -0.19
PCNA-201ENST00000379143 CWC22Q9HCG8 908 aaKnown RBP13.87□□□□□ -0.19
PCNA-201ENST00000379143 BRPF3Q9ULD4 1205 aa13.87□□□□□ -0.19
PCNA-201ENST00000379143 TNPO2O14787 897 aaKnown RBP13.86□□□□□ -0.19
PCNA-201ENST00000379143 DHX16O60231 1041 aaKnown RBP13.86□□□□□ -0.19
PCNA-201ENST00000379143 NEK4P51957 841 aa13.86□□□□□ -0.19
PCNA-201ENST00000379143 PRMT2P55345 433 aa13.86□□□□□ -0.19
PCNA-201ENST00000379143 APOBRQ0VD83 1088 aa13.86□□□□□ -0.19
PCNA-201ENST00000379143 TOB2Q14106 344 aaPredicted RBP13.86□□□□□ -0.19
PCNA-201ENST00000379143 SNRNP48Q6IEG0 339 aaKnown RBP13.86□□□□□ -0.19
PCNA-201ENST00000379143 ADGRF4Q8IZF3 695 aa13.86□□□□□ -0.19
PCNA-201ENST00000379143 CPXCR1Q8N123 301 aa13.86□□□□□ -0.19
PCNA-201ENST00000379143 ZNF274Q96GC6 653 aaPredicted RBP13.86□□□□□ -0.19
PCNA-201ENST00000379143 TBC1D32Q96NH3 1257 aa13.86□□□□□ -0.19
PCNA-201ENST00000379143 MOV10L1Q9BXT6 1211 aaKnown RBP13.86□□□□□ -0.19
PCNA-201ENST00000379143 NAP1L2Q9ULW6 460 aaPredicted RBP13.86□□□□□ -0.19
PCNA-201ENST00000379143 MGAMO43451 1857 aa13.85□□□□□ -0.19
PCNA-201ENST00000379143 NID2Q14112 1375 aa13.85□□□□□ -0.19
PCNA-201ENST00000379143 GOLGA8BA8MQT2 603 aa13.85□□□□□ -0.19
PCNA-201ENST00000379143 STRNO43815 780 aa13.85□□□□□ -0.19
PCNA-201ENST00000379143 ICAM1P05362 532 aa13.85□□□□□ -0.19
PCNA-201ENST00000379143 METAP2P50579 478 aaKnown RBP eCLIP13.85□□□□□ -0.19
PCNA-201ENST00000379143 TRAF1Q13077 416 aa13.85□□□□□ -0.19
PCNA-201ENST00000379143 PKN2Q16513 984 aaKnown RBP13.85□□□□□ -0.19
PCNA-201ENST00000379143 RTN1Q16799 776 aa13.85□□□□□ -0.19
PCNA-201ENST00000379143 TKFCQ3LXA3 575 aa13.85□□□□□ -0.19
PCNA-201ENST00000379143 CTU1Q7Z7A3 348 aaKnown RBP13.85□□□□□ -0.19
PCNA-201ENST00000379143 TRIM47Q96LD4 638 aa13.85□□□□□ -0.19
PCNA-201ENST00000379143 SPZ1Q9BXG8 430 aa13.85□□□□□ -0.19
PCNA-201ENST00000379143 PORCNQ9H237 461 aa13.85□□□□□ -0.19
PCNA-201ENST00000379143 RIOX1Q9H6W3 641 aa13.85□□□□□ -0.19
PCNA-201ENST00000379143 RAVER2Q9HCJ3 691 aaKnown RBP13.85□□□□□ -0.19
PCNA-201ENST00000379143 FBXO40Q9UH90 709 aa13.85□□□□□ -0.19
PCNA-201ENST00000379143 IVNS1ABPQ9Y6Y0 642 aa13.85□□□□□ -0.19
PCNA-201ENST00000379143 GOLGA8AA7E2F4 631 aa13.84□□□□□ -0.19
PCNA-201ENST00000379143 PEX10O60683 326 aa13.84□□□□□ -0.19
PCNA-201ENST00000379143 ERCC3P19447 782 aa13.84□□□□□ -0.19
PCNA-201ENST00000379143 RXRAP19793 462 aa13.84□□□□□ -0.19
PCNA-201ENST00000379143 RABEP1Q15276 862 aa13.84□□□□□ -0.19
PCNA-201ENST00000379143 CDC37Q16543 378 aaPredicted RBP13.84□□□□□ -0.19
PCNA-201ENST00000379143 WDR78Q5VTH9 848 aa13.84□□□□□ -0.19
PCNA-201ENST00000379143 CCDC174Q6PII3 467 aa13.84□□□□□ -0.19
PCNA-201ENST00000379143 OTOP1Q7RTM1 612 aa13.84□□□□□ -0.19
PCNA-201ENST00000379143 GPR142Q7Z601 462 aa13.84□□□□□ -0.19
PCNA-201ENST00000379143 PLEKHH3Q7Z736 793 aa13.84□□□□□ -0.19
PCNA-201ENST00000379143 NCAPG2Q86XI2 1143 aa13.84□□□□□ -0.19
PCNA-201ENST00000379143 CCDC144CPQ8IYA2 1237 aa13.84□□□□□ -0.19
PCNA-201ENST00000379143 CHST13Q8NET6 341 aa13.84□□□□□ -0.19
PCNA-201ENST00000379143 SOCS4Q8WXH5 440 aa13.84□□□□□ -0.19
PCNA-201ENST00000379143 KIF2CQ99661 725 aa13.84□□□□□ -0.19
PCNA-201ENST00000379143 ARHGAP39Q9C0H5 1083 aa13.84□□□□□ -0.19
PCNA-201ENST00000379143 JMJD4Q9H9V9 463 aa13.84□□□□□ -0.19
PCNA-201ENST00000379143 CCPG1Q9ULG6 757 aa13.84□□□□□ -0.19
PCNA-201ENST00000379143 TRIM17Q9Y577 477 aa13.84□□□□□ -0.19
PCNA-201ENST00000379143 ZNF536O15090 1300 aa13.83□□□□□ -0.19
PCNA-201ENST00000379143 FCER1AP12319 257 aa13.83□□□□□ -0.2
PCNA-201ENST00000379143 CTGFP29279 349 aa13.83□□□□□ -0.2
PCNA-201ENST00000379143 PDIA3P30101 505 aaKnown RBP13.83□□□□□ -0.2
PCNA-201ENST00000379143 AK2P54819 239 aa13.83□□□□□ -0.2
PCNA-201ENST00000379143 TMTC3Q6ZXV5 915 aa13.83□□□□□ -0.2
PCNA-201ENST00000379143 ABRAQ8N0Z2 381 aa13.83□□□□□ -0.2
PCNA-201ENST00000379143 MTMR8Q96EF0 704 aa13.83□□□□□ -0.2
PCNA-201ENST00000379143 NUDT12Q9BQG2 462 aa13.83□□□□□ -0.2
PCNA-201ENST00000379143 CPVLQ9H3G5 476 aa13.83□□□□□ -0.2
PCNA-201ENST00000379143 VAT1LQ9HCJ6 419 aa13.83□□□□□ -0.2
PCNA-201ENST00000379143 SRRDQ9UH36 339 aa13.83□□□□□ -0.2
PCNA-201ENST00000379143 SLC15A5A6NIM6 579 aa13.82□□□□□ -0.2
PCNA-201ENST00000379143 ZBTB5O15062 677 aa13.82□□□□□ -0.2
PCNA-201ENST00000379143 CYTH3O43739 400 aa13.82□□□□□ -0.2
PCNA-201ENST00000379143 PTPREP23469 700 aa13.82□□□□□ -0.2
PCNA-201ENST00000379143 SLC4A3P48751 1232 aa13.82□□□□□ -0.2
PCNA-201ENST00000379143 SNAP25P60880 206 aa13.82□□□□□ -0.2
PCNA-201ENST00000379143 KCTD2Q14681 263 aa13.82□□□□□ -0.2
PCNA-201ENST00000379143 QRICH1Q2TAL8 776 aa13.82□□□□□ -0.2
PCNA-201ENST00000379143 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.82□□□□□ -0.2
PCNA-201ENST00000379143 FBXO11Q86XK2 927 aa13.82□□□□□ -0.2
PCNA-201ENST00000379143 RAB11FIP4Q86YS3 637 aa13.82□□□□□ -0.2
PCNA-201ENST00000379143 SRBD1Q8N5C6 995 aaKnown RBP13.82□□□□□ -0.2
PCNA-201ENST00000379143 RRP36Q96EU6 259 aaKnown RBP13.82□□□□□ -0.2
PCNA-201ENST00000379143 AGBL1Q96MI9 1066 aa13.82□□□□□ -0.2
PCNA-201ENST00000379143 AMNQ9BXJ7 453 aa13.82□□□□□ -0.2
PCNA-201ENST00000379143 ACAD9Q9H845 621 aa13.82□□□□□ -0.2
PCNA-201ENST00000379143 SEC63Q9UGP8 760 aaKnown RBP13.82□□□□□ -0.2
PCNA-201ENST00000379143 HPS5Q9UPZ3 1129 aa13.82□□□□□ -0.2
PCNA-201ENST00000379143 PNMA6FA0A0J9YX94 578 aa13.81□□□□□ -0.2
PCNA-201ENST00000379143 ST18O60284 1047 aa13.81□□□□□ -0.2
PCNA-201ENST00000379143 ECM2O94769 699 aaPredicted RBP13.81□□□□□ -0.2
PCNA-201ENST00000379143 PLEKHA8P1O95397 391 aa13.81□□□□□ -0.2
PCNA-201ENST00000379143 ALAS1P13196 640 aa13.81□□□□□ -0.2
PCNA-201ENST00000379143 GRB14Q14449 540 aa13.81□□□□□ -0.2
PCNA-201ENST00000379143 CPLX2Q6PUV4 134 aaKnown RBP13.81□□□□□ -0.2
PCNA-201ENST00000379143 NBPF11Q86T75 865 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms