RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 TROAPQ12815 778 aa16.11■□□□□ 0.17
UPK1A-202ENST00000379013 CCL14Q16627 93 aa16.11■□□□□ 0.17
UPK1A-202ENST00000379013 CCDC96Q2M329 555 aa16.11■□□□□ 0.17
UPK1A-202ENST00000379013 MORN1Q5T089 497 aa16.11■□□□□ 0.17
UPK1A-202ENST00000379013 PRPF38BQ5VTL8 546 aaKnown RBP16.11■□□□□ 0.17
UPK1A-202ENST00000379013 SLFN13Q68D06 897 aa16.11■□□□□ 0.17
UPK1A-202ENST00000379013 FANCBQ8NB91 859 aa16.11■□□□□ 0.17
UPK1A-202ENST00000379013 ISY1Q9ULR0 285 aaKnown RBP16.11■□□□□ 0.17
UPK1A-202ENST00000379013 KIF3AQ9Y496 699 aa16.11■□□□□ 0.17
UPK1A-202ENST00000379013 SZT2Q5T011 3432 aa16.11■□□□□ 0.17
UPK1A-202ENST00000379013 RBBP6Q7Z6E9 1792 aaKnown RBP16.1■□□□□ 0.17
UPK1A-202ENST00000379013 PFKFB2O60825 505 aa16.1■□□□□ 0.17
UPK1A-202ENST00000379013 PDHBP11177 359 aa16.1■□□□□ 0.17
UPK1A-202ENST00000379013 BMP3P12645 472 aa16.1■□□□□ 0.17
UPK1A-202ENST00000379013 PDIA3P30101 505 aaKnown RBP16.1■□□□□ 0.17
UPK1A-202ENST00000379013 GRM4Q14833 912 aa16.1■□□□□ 0.17
UPK1A-202ENST00000379013 NOL8Q76FK4 1167 aaKnown RBP16.1■□□□□ 0.17
UPK1A-202ENST00000379013 SPICE1Q8N0Z3 855 aa16.1■□□□□ 0.17
UPK1A-202ENST00000379013 U2AF1L4Q8WU68 220 aaKnown RBP16.1■□□□□ 0.17
UPK1A-202ENST00000379013 CHURC1Q8WUH1 139 aa16.1■□□□□ 0.17
UPK1A-202ENST00000379013 TRIB2Q92519 343 aa16.1■□□□□ 0.17
UPK1A-202ENST00000379013 RABGAP1Q9Y3P9 1069 aa16.1■□□□□ 0.17
UPK1A-202ENST00000379013 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.1■□□□□ 0.17
UPK1A-202ENST00000379013 PARP14Q460N5 1801 aa16.1■□□□□ 0.17
UPK1A-202ENST00000379013 SGPL1O95470 568 aa16.09■□□□□ 0.17
UPK1A-202ENST00000379013 NDUFB10O96000 172 aa16.09■□□□□ 0.17
UPK1A-202ENST00000379013 SNHG28P0DPA3 235 aa16.09■□□□□ 0.17
UPK1A-202ENST00000379013 FDX1P10109 184 aa16.09■□□□□ 0.17
UPK1A-202ENST00000379013 SMARCA1P28370 1054 aa16.09■□□□□ 0.17
UPK1A-202ENST00000379013 STAT2P52630 851 aa16.09■□□□□ 0.17
UPK1A-202ENST00000379013 IKQ13123 557 aaPredicted RBP16.09■□□□□ 0.17
UPK1A-202ENST00000379013 LBX2Q6XYB7 198 aa16.09■□□□□ 0.17
UPK1A-202ENST00000379013 GPR142Q7Z601 462 aa16.09■□□□□ 0.17
UPK1A-202ENST00000379013 FAM160B2Q86V87 743 aa16.09■□□□□ 0.17
UPK1A-202ENST00000379013 TRIM22Q8IYM9 498 aa16.09■□□□□ 0.17
UPK1A-202ENST00000379013 NKX2-3Q8TAU0 364 aa16.09■□□□□ 0.17
UPK1A-202ENST00000379013 GTF3C6Q969F1 213 aa16.09■□□□□ 0.17
UPK1A-202ENST00000379013 DEFB118Q96PH6 123 aa16.09■□□□□ 0.17
UPK1A-202ENST00000379013 LLPHQ9BRT6 129 aaKnown RBP16.09■□□□□ 0.17
UPK1A-202ENST00000379013 PAK6Q9NQU5 681 aaPredicted RBP16.09■□□□□ 0.17
UPK1A-202ENST00000379013 TSHZ2Q9NRE2 1034 aa16.09■□□□□ 0.17
UPK1A-202ENST00000379013 PNMA2Q9UL42 364 aa16.09■□□□□ 0.17
UPK1A-202ENST00000379013 BRPF3Q9ULD4 1205 aa16.09■□□□□ 0.17
UPK1A-202ENST00000379013 TPCN1Q9ULQ1 816 aa16.09■□□□□ 0.17
UPK1A-202ENST00000379013 RLFQ13129 1914 aa16.08■□□□□ 0.16
UPK1A-202ENST00000379013 PLA2G6O60733 806 aa16.08■□□□□ 0.16
UPK1A-202ENST00000379013 MNX1P50219 401 aaPredicted RBP16.08■□□□□ 0.16
UPK1A-202ENST00000379013 UBXN2AP68543 259 aa16.08■□□□□ 0.16
UPK1A-202ENST00000379013 AKAP17AQ02040 695 aaKnown RBP16.08■□□□□ 0.16
UPK1A-202ENST00000379013 ZNF543Q08ER8 600 aa16.08■□□□□ 0.16
UPK1A-202ENST00000379013 TRAF1Q13077 416 aa16.08■□□□□ 0.16
UPK1A-202ENST00000379013 TMX3Q96JJ7 454 aa16.08■□□□□ 0.16
UPK1A-202ENST00000379013 GPHNQ9NQX3 736 aaPredicted RBP16.08■□□□□ 0.16
UPK1A-202ENST00000379013 FBXO28Q9NVF7 368 aa16.08■□□□□ 0.16
UPK1A-202ENST00000379013 FLRT1Q9NZU1 646 aa16.08■□□□□ 0.16
UPK1A-202ENST00000379013 FEM1BQ9UK73 627 aa16.08■□□□□ 0.16
UPK1A-202ENST00000379013 MTMR7Q9Y216 660 aa16.08■□□□□ 0.16
UPK1A-202ENST00000379013 TRIOBPQ9H2D6 2365 aa16.08■□□□□ 0.16
UPK1A-202ENST00000379013 HMGN5P82970 282 aaKnown RBP16.07■□□□□ 0.16
UPK1A-202ENST00000379013 COL9A3Q14050 684 aaPredicted RBP16.07■□□□□ 0.16
UPK1A-202ENST00000379013 COG2Q14746 738 aa16.07■□□□□ 0.16
UPK1A-202ENST00000379013 ME3Q16798 604 aa16.07■□□□□ 0.16
UPK1A-202ENST00000379013 PLEKHH3Q7Z736 793 aa16.07■□□□□ 0.16
UPK1A-202ENST00000379013 GTF3C2Q8WUA4 911 aaPredicted RBP16.07■□□□□ 0.16
UPK1A-202ENST00000379013 TANGO6Q9C0B7 1094 aa16.07■□□□□ 0.16
UPK1A-202ENST00000379013 CRISPLD2Q9H0B8 497 aa16.07■□□□□ 0.16
UPK1A-202ENST00000379013 SENP2Q9HC62 589 aa16.07■□□□□ 0.16
UPK1A-202ENST00000379013 RBM19Q9Y4C8 960 aaKnown RBP16.07■□□□□ 0.16
UPK1A-202ENST00000379013 LAMA3Q16787 3333 aa16.06■□□□□ 0.16
UPK1A-202ENST00000379013 PALM3A6NDB9 673 aaPredicted RBP16.06■□□□□ 0.16
UPK1A-202ENST00000379013 KLRF2D3W0D1 207 aa16.06■□□□□ 0.16
UPK1A-202ENST00000379013 IGHA2P01877 340 aa16.06■□□□□ 0.16
UPK1A-202ENST00000379013 MAPK4P31152 587 aa16.06■□□□□ 0.16
UPK1A-202ENST00000379013 DSG3P32926 999 aa16.06■□□□□ 0.16
UPK1A-202ENST00000379013 STK3Q13188 491 aa16.06■□□□□ 0.16
UPK1A-202ENST00000379013 MAP3K21Q5TCX8 1036 aa16.06■□□□□ 0.16
UPK1A-202ENST00000379013 WASF1Q92558 559 aa16.06■□□□□ 0.16
UPK1A-202ENST00000379013 ATG4CQ96DT6 458 aa16.06■□□□□ 0.16
UPK1A-202ENST00000379013 INTS4Q96HW7 963 aaKnown RBP16.06■□□□□ 0.16
UPK1A-202ENST00000379013 NUDT12Q9BQG2 462 aa16.06■□□□□ 0.16
UPK1A-202ENST00000379013 MYL10Q9BUA6 226 aa16.06■□□□□ 0.16
UPK1A-202ENST00000379013 SPZ1Q9BXG8 430 aa16.06■□□□□ 0.16
UPK1A-202ENST00000379013 MOV10L1Q9BXT6 1211 aaKnown RBP16.06■□□□□ 0.16
UPK1A-202ENST00000379013 SEC63Q9UGP8 760 aaKnown RBP16.06■□□□□ 0.16
UPK1A-202ENST00000379013 CTDP1Q9Y5B0 961 aaPredicted RBP16.06■□□□□ 0.16
UPK1A-202ENST00000379013 HMGCRP04035 888 aa16.05■□□□□ 0.16
UPK1A-202ENST00000379013 XRCC5P13010 732 aaKnown RBP16.05■□□□□ 0.16
UPK1A-202ENST00000379013 PDIA4P13667 645 aaKnown RBP16.05■□□□□ 0.16
UPK1A-202ENST00000379013 PTPREP23469 700 aa16.05■□□□□ 0.16
UPK1A-202ENST00000379013 CCT2P78371 535 aaKnown RBP16.05■□□□□ 0.16
UPK1A-202ENST00000379013 CACNB2Q08289 660 aaPredicted RBP16.05■□□□□ 0.16
UPK1A-202ENST00000379013 FAM83BQ5T0W9 1011 aa16.05■□□□□ 0.16
UPK1A-202ENST00000379013 TMTC3Q6ZXV5 915 aa16.05■□□□□ 0.16
UPK1A-202ENST00000379013 PRPF38AQ8NAV1 312 aaKnown RBP16.05■□□□□ 0.16
UPK1A-202ENST00000379013 NPLOC4Q8TAT6 608 aa16.05■□□□□ 0.16
UPK1A-202ENST00000379013 DIS3LQ8TF46 1054 aaKnown RBP16.05■□□□□ 0.16
UPK1A-202ENST00000379013 NUP88Q99567 741 aaPredicted RBP16.05■□□□□ 0.16
UPK1A-202ENST00000379013 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.05■□□□□ 0.16
UPK1A-202ENST00000379013 HOXC10Q9NYD6 342 aa16.05■□□□□ 0.16
UPK1A-202ENST00000379013 MAD2L2Q9UI95 211 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms