RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 LRIG3Q6UXM1 1119 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 RAB11FIP4Q86YS3 637 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 ZNF654Q8IZM8 581 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 WHAMMQ8TF30 809 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 ERGIC2Q96RQ1 377 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 VPS16Q9H269 839 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 SEC31BQ9NQW1 1179 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 RIPOR2Q9Y4F9 1068 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 TNS2Q63HR2 1409 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 XDHP47989 1333 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 A0A0U1RQJ8 604 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 NDUFAB1O14561 156 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 IDEP14735 1019 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 AFMP43652 599 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 LIG3P49916 1009 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 PAK2Q13177 524 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 NEDD9Q14511 834 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 ESCO1Q5FWF5 840 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 WDR59Q6PJI9 974 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 HS6ST3Q8IZP7 471 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 KCNV2Q8TDN2 545 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 ATRIPQ8WXE1 791 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 TNFRSF25Q93038 417 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 PUS3Q9BZE2 481 aaKnown RBP9.16□□□□□ -0.94
PTPRR-203ENST00000378778 EXOC1Q9NV70 894 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 GNL3LQ9NVN8 582 aaKnown RBP9.16□□□□□ -0.94
PTPRR-203ENST00000378778 TAB2Q9NYJ8 693 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 KCNJ14Q9UNX9 436 aa9.16□□□□□ -0.94
PTPRR-203ENST00000378778 TNS3Q68CZ2 1445 aa9.15□□□□□ -0.94
PTPRR-203ENST00000378778 A0A087X0B3 334 aa9.15□□□□□ -0.94
PTPRR-203ENST00000378778 NBPF26B4DH59 902 aa9.15□□□□□ -0.94
PTPRR-203ENST00000378778 CES2O00748 559 aa9.15□□□□□ -0.94
PTPRR-203ENST00000378778 DDAH1O94760 285 aa9.15□□□□□ -0.94
PTPRR-203ENST00000378778 GPTP24298 496 aa9.15□□□□□ -0.94
PTPRR-203ENST00000378778 PSEN1P49768 467 aa9.15□□□□□ -0.94
PTPRR-203ENST00000378778 HSP90AB3PQ58FF7 597 aa9.15□□□□□ -0.94
PTPRR-203ENST00000378778 NBPF10Q6P3W6 841 aaKnown RBP9.15□□□□□ -0.94
PTPRR-203ENST00000378778 SND1Q7KZF4 910 aaKnown RBP eCLIP9.15□□□□□ -0.94
PTPRR-203ENST00000378778 CREG2Q8IUH2 290 aa9.15□□□□□ -0.94
PTPRR-203ENST00000378778 NBPF15Q8N660 670 aa9.15□□□□□ -0.94
PTPRR-203ENST00000378778 ZBTB38Q8NAP3 1195 aaPredicted RBP9.15□□□□□ -0.94
PTPRR-203ENST00000378778 KAT2BQ92831 832 aa9.15□□□□□ -0.94
PTPRR-203ENST00000378778 CHP1Q99653 195 aa9.15□□□□□ -0.94
PTPRR-203ENST00000378778 LUC7LQ9NQ29 371 aaKnown RBP9.15□□□□□ -0.94
PTPRR-203ENST00000378778 CCDC9Q9Y3X0 531 aaKnown RBP9.15□□□□□ -0.94
PTPRR-203ENST00000378778 LOC102724159A0A0B4J2E5 919 aa9.15□□□□□ -0.95
PTPRR-203ENST00000378778 LAD1O00515 517 aa9.15□□□□□ -0.95
PTPRR-203ENST00000378778 SCARF1Q14162 830 aa9.15□□□□□ -0.95
PTPRR-203ENST00000378778 PWP2Q15269 919 aaKnown RBP9.15□□□□□ -0.95
PTPRR-203ENST00000378778 METTL24Q5JXM2 366 aa9.15□□□□□ -0.95
PTPRR-203ENST00000378778 ZSCAN29Q8IWY8 852 aaPredicted RBP9.15□□□□□ -0.95
PTPRR-203ENST00000378778 EPSTI1Q96J88 318 aa9.15□□□□□ -0.95
PTPRR-203ENST00000378778 ZNF594Q96JF6 807 aaPredicted RBP9.15□□□□□ -0.95
PTPRR-203ENST00000378778 NUCKS1Q9H1E3 243 aaKnown RBP9.15□□□□□ -0.95
PTPRR-203ENST00000378778 VCPKMTQ9H867 229 aa9.15□□□□□ -0.95
PTPRR-203ENST00000378778 NHEJ1Q9H9Q4 299 aaPredicted RBP9.15□□□□□ -0.95
PTPRR-203ENST00000378778 H0YHG0 523 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 RHOBTB3O94955 611 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 FGFR1OPO95684 399 aaKnown RBP9.14□□□□□ -0.95
PTPRR-203ENST00000378778 ERCC3P19447 782 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 CALML3P27482 149 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 CALRP27797 417 aaKnown RBP9.14□□□□□ -0.95
PTPRR-203ENST00000378778 NAP1L1P55209 391 aaKnown RBP9.14□□□□□ -0.95
PTPRR-203ENST00000378778 ACTN3Q08043 901 aaPredicted RBP9.14□□□□□ -0.95
PTPRR-203ENST00000378778 NR5A1Q13285 461 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 PREPLQ4J6C6 727 aaPredicted RBP9.14□□□□□ -0.95
PTPRR-203ENST00000378778 WLSQ5T9L3 541 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 KCNV1Q6PIU1 500 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 SPATA4Q8NEY3 305 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 ZC3H15Q8WU90 426 aaKnown RBP9.14□□□□□ -0.95
PTPRR-203ENST00000378778 ESR2Q92731 530 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 UBAC1Q9BSL1 405 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 SH2D4AQ9H788 454 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 GDF3Q9NR23 364 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 MROH5Q6ZUA9 1318 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 RXRAP19793 462 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 GUCY1A2P33402 732 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 LMNB2Q03252 620 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 CTDSPL2Q05D32 466 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 USP49Q70CQ1 688 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 IRF2BP1Q8IU81 584 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 IQCKQ8N0W5 287 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 VGLL2Q8N8G2 317 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 GIMAP7Q8NHV1 300 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 GPBP1L1Q9HC44 474 aaPredicted RBP9.14□□□□□ -0.95
PTPRR-203ENST00000378778 SENP2Q9HC62 589 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 JADE2Q9NQC1 790 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 SH3GLB2Q9NR46 395 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 AXIN2Q9Y2T1 843 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 CAPN7Q9Y6W3 813 aa9.14□□□□□ -0.95
PTPRR-203ENST00000378778 ANKRD18BA2A2Z9 1011 aa9.13□□□□□ -0.95
PTPRR-203ENST00000378778 RNF225M0QZC1 329 aaPredicted RBP9.13□□□□□ -0.95
PTPRR-203ENST00000378778 FAM107AO95990 144 aa9.13□□□□□ -0.95
PTPRR-203ENST00000378778 ABL1P00519 1130 aa9.13□□□□□ -0.95
PTPRR-203ENST00000378778 SEC23AQ15436 765 aa9.13□□□□□ -0.95
PTPRR-203ENST00000378778 CFAP221Q4G0U5 840 aa9.13□□□□□ -0.95
PTPRR-203ENST00000378778 FKBP15Q5T1M5 1219 aa9.13□□□□□ -0.95
PTPRR-203ENST00000378778 CFAP58Q5T655 872 aa9.13□□□□□ -0.95
PTPRR-203ENST00000378778 CCDC181Q5TID7 509 aa9.13□□□□□ -0.95
PTPRR-203ENST00000378778 CCDC84Q86UT8 332 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms