RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 KCTD1Q719H9 257 aa20.01■□□□□ 0.79
RER1-202ENST00000378512 LRCH3Q96II8 777 aa20.01■□□□□ 0.79
RER1-202ENST00000378512 PGK2P07205 417 aa20■□□□□ 0.79
RER1-202ENST00000378512 PDHBP11177 359 aa20■□□□□ 0.79
RER1-202ENST00000378512 MAGEA10P43363 369 aaPredicted RBP20■□□□□ 0.79
RER1-202ENST00000378512 IQCA1Q86XH1 822 aa20■□□□□ 0.79
RER1-202ENST00000378512 ESYT1Q9BSJ8 1104 aa20■□□□□ 0.79
RER1-202ENST00000378512 DIS3Q9Y2L1 958 aaKnown RBP20■□□□□ 0.79
RER1-202ENST00000378512 ENAHQ8N8S7 591 aaPredicted RBP19.99■□□□□ 0.79
RER1-202ENST00000378512 MAML3Q96JK9 1138 aa19.99■□□□□ 0.79
RER1-202ENST00000378512 ZSCAN10Q96SZ4 725 aaPredicted RBP19.99■□□□□ 0.79
RER1-202ENST00000378512 ZKSCAN3Q9BRR0 538 aa19.99■□□□□ 0.79
RER1-202ENST00000378512 SENP6Q9GZR1 1112 aaPredicted RBP19.99■□□□□ 0.79
RER1-202ENST00000378512 LSG1Q9H089 658 aaKnown RBP19.99■□□□□ 0.79
RER1-202ENST00000378512 PRR12Q9ULL5 1215 aa19.99■□□□□ 0.79
RER1-202ENST00000378512 DNAJC25-GNG10A0A024R161 153 aa19.98■□□□□ 0.79
RER1-202ENST00000378512 ATN1P54259 1190 aaPredicted RBP19.98■□□□□ 0.79
RER1-202ENST00000378512 ZNF792Q3KQV3 632 aa19.98■□□□□ 0.79
RER1-202ENST00000378512 GJC2Q5T442 439 aaPredicted RBP19.98■□□□□ 0.79
RER1-202ENST00000378512 ERICH6BQ5W0A0 696 aa19.98■□□□□ 0.79
RER1-202ENST00000378512 MMP19Q99542 508 aa19.98■□□□□ 0.79
RER1-202ENST00000378512 RAVER2Q9HCJ3 691 aaKnown RBP19.98■□□□□ 0.79
RER1-202ENST00000378512 SLC5A4Q9NY91 659 aa19.98■□□□□ 0.79
RER1-202ENST00000378512 TAF6LQ9Y6J9 622 aa19.98■□□□□ 0.79
RER1-202ENST00000378512 LCTP09848 1927 aa19.97■□□□□ 0.79
RER1-202ENST00000378512 ZNF543Q08ER8 600 aa19.97■□□□□ 0.79
RER1-202ENST00000378512 SEC23AQ15436 765 aa19.97■□□□□ 0.79
RER1-202ENST00000378512 CPXCR1Q8N123 301 aa19.97■□□□□ 0.79
RER1-202ENST00000378512 CHST13Q8NET6 341 aa19.97■□□□□ 0.79
RER1-202ENST00000378512 RANBP17Q9H2T7 1088 aaKnown RBP19.97■□□□□ 0.79
RER1-202ENST00000378512 TNKSO95271 1327 aa19.97■□□□□ 0.79
RER1-202ENST00000378512 NEFLP07196 543 aa19.96■□□□□ 0.79
RER1-202ENST00000378512 KCTD2Q14681 263 aa19.96■□□□□ 0.79
RER1-202ENST00000378512 TTBK2Q6IQ55 1244 aa19.96■□□□□ 0.79
RER1-202ENST00000378512 CYB5R4Q7L1T6 521 aa19.96■□□□□ 0.79
RER1-202ENST00000378512 RBM8AQ9Y5S9 174 aaKnown RBP19.96■□□□□ 0.79
RER1-202ENST00000378512 A0A1W2PPC1 479 aa19.95■□□□□ 0.78
RER1-202ENST00000378512 E7EWF7 191 aa19.95■□□□□ 0.78
RER1-202ENST00000378512 TAL1P17542 331 aaPredicted RBP19.95■□□□□ 0.78
RER1-202ENST00000378512 BMP8BP34820 402 aa19.95■□□□□ 0.78
RER1-202ENST00000378512 STOX1Q6ZVD7 989 aa19.95■□□□□ 0.78
RER1-202ENST00000378512 PNMA1Q8ND90 353 aa19.95■□□□□ 0.78
RER1-202ENST00000378512 CHMP4CQ96CF2 233 aa19.95■□□□□ 0.78
RER1-202ENST00000378512 FBXO40Q9UH90 709 aa19.95■□□□□ 0.78
RER1-202ENST00000378512 MCM3APO60318 1980 aa19.95■□□□□ 0.78
RER1-202ENST00000378512 DNM1LO00429 736 aa19.94■□□□□ 0.78
RER1-202ENST00000378512 SEPT4O43236 478 aa19.94■□□□□ 0.78
RER1-202ENST00000378512 MSCO60682 206 aa19.94■□□□□ 0.78
RER1-202ENST00000378512 MYCNP04198 464 aaPredicted RBP19.94■□□□□ 0.78
RER1-202ENST00000378512 NECTIN1Q15223 517 aa19.94■□□□□ 0.78
RER1-202ENST00000378512 CCDC96Q2M329 555 aa19.94■□□□□ 0.78
RER1-202ENST00000378512 TKFCQ3LXA3 575 aa19.94■□□□□ 0.78
RER1-202ENST00000378512 GPATCH4Q5T3I0 446 aaKnown RBP19.94■□□□□ 0.78
RER1-202ENST00000378512 SYDE2Q5VT97 1194 aa19.94■□□□□ 0.78
RER1-202ENST00000378512 AGBL1Q96MI9 1066 aa19.94■□□□□ 0.78
RER1-202ENST00000378512 MYH6P13533 1939 aa19.94■□□□□ 0.78
RER1-202ENST00000378512 ICAM1P05362 532 aa19.93■□□□□ 0.78
RER1-202ENST00000378512 SLC4A3P48751 1232 aa19.93■□□□□ 0.78
RER1-202ENST00000378512 MDM2Q00987 491 aaPredicted RBP19.93■□□□□ 0.78
RER1-202ENST00000378512 IKQ13123 557 aaPredicted RBP19.93■□□□□ 0.78
RER1-202ENST00000378512 MSL3Q8N5Y2 521 aaKnown RBP19.93■□□□□ 0.78
RER1-202ENST00000378512 LENG1Q96BZ8 264 aaPredicted RBP19.93■□□□□ 0.78
RER1-202ENST00000378512 NRBP1Q9UHY1 535 aa19.93■□□□□ 0.78
RER1-202ENST00000378512 MTMR7Q9Y216 660 aa19.93■□□□□ 0.78
RER1-202ENST00000378512 CTDP1Q9Y5B0 961 aaPredicted RBP19.93■□□□□ 0.78
RER1-202ENST00000378512 FRMPD2Q68DX3 1309 aaPredicted RBP19.93■□□□□ 0.78
RER1-202ENST00000378512 SLC16A2P36021 539 aa19.93■□□□□ 0.78
RER1-202ENST00000378512 TRDNQ13061 729 aa19.93■□□□□ 0.78
RER1-202ENST00000378512 MAMDC4Q6UXC1 1216 aa19.93■□□□□ 0.78
RER1-202ENST00000378512 KIAA1211Q6ZU35 1233 aa19.93■□□□□ 0.78
RER1-202ENST00000378512 ZNF467Q7Z7K2 595 aaPredicted RBP19.93■□□□□ 0.78
RER1-202ENST00000378512 MB21D2Q8IYB1 491 aaPredicted RBP19.93■□□□□ 0.78
RER1-202ENST00000378512 NCOA7Q8NI08 942 aa19.93■□□□□ 0.78
RER1-202ENST00000378512 FGD4Q96M96 766 aa19.93■□□□□ 0.78
RER1-202ENST00000378512 TINF2Q9BSI4 451 aa19.93■□□□□ 0.78
RER1-202ENST00000378512 UBAC1Q9BSL1 405 aa19.93■□□□□ 0.78
RER1-202ENST00000378512 KAT14Q9H8E8 782 aa19.93■□□□□ 0.78
RER1-202ENST00000378512 UBE2OQ9C0C9 1292 aaKnown RBP19.92■□□□□ 0.78
RER1-202ENST00000378512 ACAD9Q9H845 621 aa19.92■□□□□ 0.78
RER1-202ENST00000378512 GPCPD1Q9NPB8 672 aa19.92■□□□□ 0.78
RER1-202ENST00000378512 ISY1Q9ULR0 285 aaKnown RBP19.92■□□□□ 0.78
RER1-202ENST00000378512 CDC45O75419 566 aa19.91■□□□□ 0.78
RER1-202ENST00000378512 CENPBP07199 599 aaPredicted RBP19.91■□□□□ 0.78
RER1-202ENST00000378512 ANTXR2P58335 489 aa19.91■□□□□ 0.78
RER1-202ENST00000378512 RTP1P59025 263 aa19.91■□□□□ 0.78
RER1-202ENST00000378512 SNAP25P60880 206 aa19.91■□□□□ 0.78
RER1-202ENST00000378512 ASPRV1Q53RT3 343 aa19.91■□□□□ 0.78
RER1-202ENST00000378512 FERMT2Q96AC1 680 aa19.91■□□□□ 0.78
RER1-202ENST00000378512 MTA3Q9BTC8 594 aa19.91■□□□□ 0.78
RER1-202ENST00000378512 A1CFQ9NQ94 594 aaKnown RBP19.91■□□□□ 0.78
RER1-202ENST00000378512 RNF146Q9NTX7 359 aa19.91■□□□□ 0.78
RER1-202ENST00000378512 WDR19Q8NEZ3 1342 aa19.91■□□□□ 0.78
RER1-202ENST00000378512 SYNGAP1Q96PV0 1343 aa19.91■□□□□ 0.78
RER1-202ENST00000378512 LRRC37A2A6NM11 1700 aa19.9■□□□□ 0.78
RER1-202ENST00000378512 SLC27A2O14975 620 aa19.9■□□□□ 0.78
RER1-202ENST00000378512 LRRC41Q15345 812 aa19.9■□□□□ 0.78
RER1-202ENST00000378512 IFIT1BQ5T764 474 aaKnown RBP19.9■□□□□ 0.78
RER1-202ENST00000378512 FAM133AQ8N9E0 248 aa19.9■□□□□ 0.78
RER1-202ENST00000378512 DDX11Q96FC9 970 aa19.9■□□□□ 0.78
RER1-202ENST00000378512 TRERF1Q96PN7 1200 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms