RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 RBBP6Q7Z6E9 1792 aaKnown RBP18.19■□□□□ 0.5
CCDC107-204ENST00000378409 hCG_1984214I3L0E3 225 aa18.19■□□□□ 0.5
CCDC107-204ENST00000378409 STXBP3O00186 592 aa18.19■□□□□ 0.5
CCDC107-204ENST00000378409 PPP1R11O60927 126 aaPredicted RBP18.19■□□□□ 0.5
CCDC107-204ENST00000378409 SLC10A3P09131 477 aa18.19■□□□□ 0.5
CCDC107-204ENST00000378409 NAPAP54920 295 aa18.19■□□□□ 0.5
CCDC107-204ENST00000378409 PABPC4Q13310 644 aaKnown RBP eCLIP18.19■□□□□ 0.5
CCDC107-204ENST00000378409 CCDC174Q6PII3 467 aa18.19■□□□□ 0.5
CCDC107-204ENST00000378409 DNAJC5GQ8N7S2 189 aa18.19■□□□□ 0.5
CCDC107-204ENST00000378409 ZNF713Q8N859 430 aaPredicted RBP18.19■□□□□ 0.5
CCDC107-204ENST00000378409 COA7Q96BR5 231 aa18.19■□□□□ 0.5
CCDC107-204ENST00000378409 ATG4CQ96DT6 458 aa18.19■□□□□ 0.5
CCDC107-204ENST00000378409 BARHL2Q9NY43 387 aa18.19■□□□□ 0.5
CCDC107-204ENST00000378409 KCNJ14Q9UNX9 436 aa18.19■□□□□ 0.5
CCDC107-204ENST00000378409 CTDP1Q9Y5B0 961 aaPredicted RBP18.19■□□□□ 0.5
CCDC107-204ENST00000378409 TCHHQ07283 1943 aa18.18■□□□□ 0.5
CCDC107-204ENST00000378409 ZBED4O75132 1171 aa18.18■□□□□ 0.5
CCDC107-204ENST00000378409 BRD1O95696 1058 aa18.18■□□□□ 0.5
CCDC107-204ENST00000378409 ZSCAN22P10073 491 aaPredicted RBP18.18■□□□□ 0.5
CCDC107-204ENST00000378409 HOXA7P31268 230 aaPredicted RBP18.18■□□□□ 0.5
CCDC107-204ENST00000378409 DSG3P32926 999 aa18.18■□□□□ 0.5
CCDC107-204ENST00000378409 IRX3P78415 501 aaPredicted RBP18.18■□□□□ 0.5
CCDC107-204ENST00000378409 MCTP1Q6DN14 999 aa18.18■□□□□ 0.5
CCDC107-204ENST00000378409 GPAT2Q6NUI2 795 aa18.18■□□□□ 0.5
CCDC107-204ENST00000378409 PAXIP1Q6ZW49 1069 aaPredicted RBP18.18■□□□□ 0.5
CCDC107-204ENST00000378409 FBXO11Q86XK2 927 aa18.18■□□□□ 0.5
CCDC107-204ENST00000378409 SHISA4Q96DD7 197 aa18.18■□□□□ 0.5
CCDC107-204ENST00000378409 AMNQ9BXJ7 453 aa18.18■□□□□ 0.5
CCDC107-204ENST00000378409 SH3GLB2Q9NR46 395 aa18.18■□□□□ 0.5
CCDC107-204ENST00000378409 ZDHHC9Q9Y397 364 aa18.18■□□□□ 0.5
CCDC107-204ENST00000378409 MYPNQ86TC9 1320 aa18.18■□□□□ 0.5
CCDC107-204ENST00000378409 MMP1P03956 469 aa18.17■□□□□ 0.5
CCDC107-204ENST00000378409 NLRP5P59047 1200 aa18.17■□□□□ 0.5
CCDC107-204ENST00000378409 HTRA3P83110 453 aa18.17■□□□□ 0.5
CCDC107-204ENST00000378409 USH1GQ495M9 461 aa18.17■□□□□ 0.5
CCDC107-204ENST00000378409 TYW1BQ6NUM6 668 aa18.17■□□□□ 0.5
CCDC107-204ENST00000378409 CCDC148Q8NFR7 591 aa18.17■□□□□ 0.5
CCDC107-204ENST00000378409 CCDC12Q8WUD4 166 aaPredicted RBP18.17■□□□□ 0.5
CCDC107-204ENST00000378409 BRI3BPQ8WY22 251 aa18.17■□□□□ 0.5
CCDC107-204ENST00000378409 HHIPL1Q96JK4 782 aa18.17■□□□□ 0.5
CCDC107-204ENST00000378409 PHF20Q9BVI0 1012 aa18.17■□□□□ 0.5
CCDC107-204ENST00000378409 ASCC2Q9H1I8 757 aaPredicted RBP18.17■□□□□ 0.5
CCDC107-204ENST00000378409 SLC38A10Q9HBR0 1119 aa18.17■□□□□ 0.5
CCDC107-204ENST00000378409 HOXC10Q9NYD6 342 aa18.17■□□□□ 0.5
CCDC107-204ENST00000378409 PCDHA1Q9Y5I3 950 aa18.17■□□□□ 0.5
CCDC107-204ENST00000378409 SPDYE16A6NNV3 312 aaPredicted RBP18.16■□□□□ 0.5
CCDC107-204ENST00000378409 VWA5AO00534 786 aa18.16■□□□□ 0.5
CCDC107-204ENST00000378409 FDX1P10109 184 aa18.16■□□□□ 0.5
CCDC107-204ENST00000378409 TAL1P17542 331 aaPredicted RBP18.16■□□□□ 0.5
CCDC107-204ENST00000378409 SAFBQ15424 915 aaKnown RBP eCLIP18.16■□□□□ 0.5
CCDC107-204ENST00000378409 FERMT3Q86UX7 667 aa18.16■□□□□ 0.5
CCDC107-204ENST00000378409 RGS22Q8NE09 1264 aa18.16■□□□□ 0.5
CCDC107-204ENST00000378409 CCDC102AQ96A19 550 aa18.16■□□□□ 0.5
CCDC107-204ENST00000378409 MANSC4A6NHS7 340 aaPredicted RBP18.15■□□□□ 0.5
CCDC107-204ENST00000378409 BTBD19C9JJ37 291 aa18.15■□□□□ 0.5
CCDC107-204ENST00000378409 F13A1P00488 732 aa18.15■□□□□ 0.5
CCDC107-204ENST00000378409 ICAM1P05362 532 aa18.15■□□□□ 0.5
CCDC107-204ENST00000378409 OSBPP22059 807 aa18.15■□□□□ 0.5
CCDC107-204ENST00000378409 TRAF1Q13077 416 aa18.15■□□□□ 0.5
CCDC107-204ENST00000378409 GRM1Q13255 1194 aa18.15■□□□□ 0.5
CCDC107-204ENST00000378409 GNL2Q13823 731 aaKnown RBP18.15■□□□□ 0.5
CCDC107-204ENST00000378409 PPP1R18Q6NYC8 613 aa18.15■□□□□ 0.5
CCDC107-204ENST00000378409 CPXCR1Q8N123 301 aa18.15■□□□□ 0.5
CCDC107-204ENST00000378409 P2RX7Q99572 595 aaKnown RBP18.15■□□□□ 0.5
CCDC107-204ENST00000378409 RAVER2Q9HCJ3 691 aaKnown RBP18.15■□□□□ 0.5
CCDC107-204ENST00000378409 CREBZFQ9NS37 354 aa18.15■□□□□ 0.5
CCDC107-204ENST00000378409 PNMA3Q9UL41 463 aa18.15■□□□□ 0.5
CCDC107-204ENST00000378409 CCPG1Q9ULG6 757 aa18.15■□□□□ 0.5
CCDC107-204ENST00000378409 ADAMTS5Q9UNA0 930 aa18.15■□□□□ 0.5
CCDC107-204ENST00000378409 SMCO2A6NFE2 343 aa18.14■□□□□ 0.49
CCDC107-204ENST00000378409 FAM155AB1AL88 458 aaPredicted RBP18.14■□□□□ 0.49
CCDC107-204ENST00000378409 PDHXO00330 501 aa18.14■□□□□ 0.49
CCDC107-204ENST00000378409 CALML3P27482 149 aa18.14■□□□□ 0.49
CCDC107-204ENST00000378409 KRT2P35908 639 aa18.14■□□□□ 0.49
CCDC107-204ENST00000378409 ANKRD23Q86SG2 305 aa18.14■□□□□ 0.49
CCDC107-204ENST00000378409 DIS3L2Q8IYB7 885 aaKnown RBP18.14■□□□□ 0.49
CCDC107-204ENST00000378409 FAM177A1Q8N128 213 aaPredicted RBP18.14■□□□□ 0.49
CCDC107-204ENST00000378409 AGBL1Q96MI9 1066 aa18.14■□□□□ 0.49
CCDC107-204ENST00000378409 BRMS1Q9HCU9 246 aa18.14■□□□□ 0.49
CCDC107-204ENST00000378409 C6orf50Q9HD87 102 aa18.14■□□□□ 0.49
CCDC107-204ENST00000378409 SLC45A1Q9Y2W3 748 aa18.14■□□□□ 0.49
CCDC107-204ENST00000378409 ZNF536O15090 1300 aa18.14■□□□□ 0.49
CCDC107-204ENST00000378409 HERVK_113P62684 666 aa18.13■□□□□ 0.49
CCDC107-204ENST00000378409 KIF23Q02241 960 aaPredicted RBP18.13■□□□□ 0.49
CCDC107-204ENST00000378409 CYP4F22Q6NT55 531 aa18.13■□□□□ 0.49
CCDC107-204ENST00000378409 FAM43AQ8N2R8 423 aa18.13■□□□□ 0.49
CCDC107-204ENST00000378409 REPS2Q8NFH8 660 aa18.13■□□□□ 0.49
CCDC107-204ENST00000378409 OXER1Q8TDS5 423 aa18.13■□□□□ 0.49
CCDC107-204ENST00000378409 ZMYND12Q9H0C1 365 aa18.13■□□□□ 0.49
CCDC107-204ENST00000378409 PCDHA4Q9UN74 947 aa18.13■□□□□ 0.49
CCDC107-204ENST00000378409 ABCB11O95342 1321 aa18.13■□□□□ 0.49
CCDC107-204ENST00000378409 ESYT2A0FGR8 921 aa18.12■□□□□ 0.49
CCDC107-204ENST00000378409 TESPA1A2RU30 521 aaPredicted RBP18.12■□□□□ 0.49
CCDC107-204ENST00000378409 BTBD18B2RXH4 712 aa18.12■□□□□ 0.49
CCDC107-204ENST00000378409 KIF28PB7ZC32 967 aa18.12■□□□□ 0.49
CCDC107-204ENST00000378409 GNA11P29992 359 aa18.12■□□□□ 0.49
CCDC107-204ENST00000378409 ADCY7P51828 1080 aa18.12■□□□□ 0.49
CCDC107-204ENST00000378409 RESTQ13127 1097 aa18.12■□□□□ 0.49
CCDC107-204ENST00000378409 PLS1Q14651 629 aa18.12■□□□□ 0.49
CCDC107-204ENST00000378409 NPY5RQ15761 445 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms