RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 NCOA7Q8NI08 942 aa12.94□□□□□ -0.34
NPHP4-202ENST00000378161 PPP1R14BQ96C90 147 aa12.94□□□□□ -0.34
NPHP4-202ENST00000378161 ABHD8Q96I13 439 aa12.94□□□□□ -0.34
NPHP4-202ENST00000378161 NDNQ99608 321 aa12.94□□□□□ -0.34
NPHP4-202ENST00000378161 FANCLQ9NW38 375 aa12.94□□□□□ -0.34
NPHP4-202ENST00000378161 ANKIB1Q9P2G1 1089 aa12.94□□□□□ -0.34
NPHP4-202ENST00000378161 SH3GLB1Q9Y371 365 aa12.94□□□□□ -0.34
NPHP4-202ENST00000378161 L3MBTL1Q9Y468 752 aa12.94□□□□□ -0.34
NPHP4-202ENST00000378161 TOM1L2Q6ZVM7 507 aa12.94□□□□□ -0.34
NPHP4-202ENST00000378161 CYFIP2Q96F07 1278 aa12.94□□□□□ -0.34
NPHP4-202ENST00000378161 KIF1BO60333 1816 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 IQCA1LA6NCM1 817 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 HGSO14964 777 aaPredicted RBP12.93□□□□□ -0.34
NPHP4-202ENST00000378161 PRC1O43663 620 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 SNRPA1P09661 255 aaKnown RBP12.93□□□□□ -0.34
NPHP4-202ENST00000378161 PTGISQ16647 500 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 ACCSLQ4AC99 568 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 IQCDQ96DY2 449 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 DNAI2Q9GZS0 605 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 ZWILCHQ9H900 591 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 DMAP1Q9NPF5 467 aaPredicted RBP12.93□□□□□ -0.34
NPHP4-202ENST00000378161 STAP2Q9UGK3 403 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 CARD8Q9Y2G2 431 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 TET3O43151 1660 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 SMNDC1O75940 238 aaKnown RBP eCLIP12.93□□□□□ -0.34
NPHP4-202ENST00000378161 RPS6KB1P23443 525 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 SYKP43405 635 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 BLMHQ13867 455 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 CYLC2Q14093 348 aaPredicted RBP12.93□□□□□ -0.34
NPHP4-202ENST00000378161 CWF19L2Q2TBE0 894 aaKnown RBP12.93□□□□□ -0.34
NPHP4-202ENST00000378161 THOC7Q6I9Y2 204 aaKnown RBP12.93□□□□□ -0.34
NPHP4-202ENST00000378161 EMBQ6PCB8 327 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 DHX32Q7L7V1 743 aaKnown RBP12.93□□□□□ -0.34
NPHP4-202ENST00000378161 NBPF15Q8N660 670 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 MYCBPAPQ8TBZ2 947 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 ARHGEF2Q92974 986 aaKnown RBP12.93□□□□□ -0.34
NPHP4-202ENST00000378161 CATSPER2Q96P56 530 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 CCDC85AQ96PX6 553 aaPredicted RBP12.93□□□□□ -0.34
NPHP4-202ENST00000378161 CTAGE1Q96RT6 745 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 ARIH1Q9Y4X5 557 aaPredicted RBP12.93□□□□□ -0.34
NPHP4-202ENST00000378161 ATP5J2-PTCD1G3V325 749 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 PTCD1O75127 700 aaKnown RBP12.93□□□□□ -0.34
NPHP4-202ENST00000378161 ZNF24P17028 368 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 CCT6AP40227 531 aaKnown RBP12.93□□□□□ -0.34
NPHP4-202ENST00000378161 MDH1P40925 334 aaKnown RBP12.93□□□□□ -0.34
NPHP4-202ENST00000378161 DNA2P51530 1060 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 SEC24CP53992 1094 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 COPS6Q7L5N1 327 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 XAGE3Q8WTP9 111 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 ZFAND2BQ8WV99 257 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 UBLCP1Q8WVY7 318 aaPredicted RBP12.93□□□□□ -0.34
NPHP4-202ENST00000378161 USP44Q9H0E7 712 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 PARVBQ9HBI1 364 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 MAP3K4Q9Y6R4 1608 aa12.93□□□□□ -0.34
NPHP4-202ENST00000378161 TMEM232C9JQI7 657 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 SERPINB3P29508 390 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 IARSP41252 1262 aaKnown RBP12.92□□□□□ -0.34
NPHP4-202ENST00000378161 AARSP49588 968 aaKnown RBP eCLIP12.92□□□□□ -0.34
NPHP4-202ENST00000378161 IFIT5Q13325 482 aaKnown RBP12.92□□□□□ -0.34
NPHP4-202ENST00000378161 NCAPH2Q6IBW4 605 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 MTHFD1LQ6UB35 978 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 ARPC5LQ9BPX5 153 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 HINFPQ9BQA5 517 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 NAPBQ9H115 298 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 STMN4Q9H169 189 aaPredicted RBP12.92□□□□□ -0.34
NPHP4-202ENST00000378161 EHD4Q9H223 541 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 NRDE2Q9H7Z3 1164 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 MTUS1Q9ULD2 1270 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 SLC27A2O14975 620 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 KDM1AO60341 852 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 HOXC9P31274 260 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 RASSF2P50749 326 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 ZBED6P86452 979 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 NUGGCQ68CJ6 796 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 IFNL2Q8IZJ0 200 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 KIAA1468Q9P260 1216 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 KLF18A0A0U1RQI7 1052 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 PDE1BQ01064 536 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 KIF5AQ12840 1032 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 GALNT17Q6IS24 598 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 TRIM50Q86XT4 487 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 NUTM2AQ8IVF1 878 aaPredicted RBP12.92□□□□□ -0.34
NPHP4-202ENST00000378161 MMTAG2Q9BU76 263 aaKnown RBP12.92□□□□□ -0.34
NPHP4-202ENST00000378161 THRAP3Q9Y2W1 955 aaKnown RBP12.92□□□□□ -0.34
NPHP4-202ENST00000378161 MADDQ8WXG6 1647 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 TLDC2A0PJX2 215 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 VWA3AA6NCI4 1184 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 GOLGA8AA7E2F4 631 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 GUCY2FP51841 1108 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 HAND2P61296 217 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 KRT72Q14CN4 511 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 KRT71Q3SY84 523 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 RAB3IL1Q8TBN0 382 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 PALMDQ9NP74 551 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 DDX21Q9NR30 783 aaKnown RBP eCLIP12.92□□□□□ -0.34
NPHP4-202ENST00000378161 SLC12A7Q9Y666 1083 aa12.92□□□□□ -0.34
NPHP4-202ENST00000378161 KCNA3P22001 575 aa12.91□□□□□ -0.34
NPHP4-202ENST00000378161 ANKZF1Q9H8Y5 726 aa12.91□□□□□ -0.34
NPHP4-202ENST00000378161 PRDM11Q9NQV5 511 aa12.91□□□□□ -0.34
NPHP4-202ENST00000378161 STOML1Q9UBI4 398 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms