RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 CLIC4Q9Y696 253 aa19.78■□□□□ 0.76
CLSTN1-202ENST00000377298 CEP128Q6ZU80 1094 aa19.78■□□□□ 0.76
CLSTN1-202ENST00000377298 SYMPKQ92797 1274 aaKnown RBP19.78■□□□□ 0.76
CLSTN1-202ENST00000377298 RNF34Q969K3 372 aa19.78■□□□□ 0.76
CLSTN1-202ENST00000377298 GJD4Q96KN9 370 aaPredicted RBP19.78■□□□□ 0.76
CLSTN1-202ENST00000377298 TIGD1Q96MW7 591 aa19.78■□□□□ 0.76
CLSTN1-202ENST00000377298 ARMCX3Q9UH62 379 aaPredicted RBP19.78■□□□□ 0.76
CLSTN1-202ENST00000377298 LIG4P49917 911 aa19.78■□□□□ 0.76
CLSTN1-202ENST00000377298 TTC14Q96N46 770 aa19.78■□□□□ 0.76
CLSTN1-202ENST00000377298 ZSWIM5Q9P217 1185 aa19.78■□□□□ 0.76
CLSTN1-202ENST00000377298 KCNJ18B7U540 433 aa19.78■□□□□ 0.76
CLSTN1-202ENST00000377298 N4BP1O75113 896 aaKnown RBP19.78■□□□□ 0.76
CLSTN1-202ENST00000377298 ERCC3P19447 782 aa19.78■□□□□ 0.76
CLSTN1-202ENST00000377298 MORC3Q14149 939 aa19.78■□□□□ 0.76
CLSTN1-202ENST00000377298 KCNJ12Q14500 433 aa19.78■□□□□ 0.76
CLSTN1-202ENST00000377298 FAM26FQ5R3K3 315 aa19.78■□□□□ 0.76
CLSTN1-202ENST00000377298 FAM160B1Q5W0V3 765 aa19.78■□□□□ 0.76
CLSTN1-202ENST00000377298 DCUN1D2Q6PH85 259 aa19.78■□□□□ 0.76
CLSTN1-202ENST00000377298 RDH13Q8NBN7 331 aa19.78■□□□□ 0.76
CLSTN1-202ENST00000377298 JCADQ9P266 1359 aa19.77■□□□□ 0.76
CLSTN1-202ENST00000377298 ERCC5P28715 1186 aaPredicted RBP19.77■□□□□ 0.76
CLSTN1-202ENST00000377298 KCTD1Q719H9 257 aa19.77■□□□□ 0.76
CLSTN1-202ENST00000377298 CLIC6Q96NY7 704 aa19.77■□□□□ 0.76
CLSTN1-202ENST00000377298 ISCA1Q9BUE6 129 aa19.77■□□□□ 0.76
CLSTN1-202ENST00000377298 METTL14Q9HCE5 456 aaKnown RBP19.77■□□□□ 0.76
CLSTN1-202ENST00000377298 FAM207AQ9NSI2 230 aaPredicted RBP19.77■□□□□ 0.76
CLSTN1-202ENST00000377298 POLR3EQ9NVU0 708 aa19.77■□□□□ 0.76
CLSTN1-202ENST00000377298 PIM2Q9P1W9 311 aa19.77■□□□□ 0.76
CLSTN1-202ENST00000377298 MINPP1Q9UNW1 487 aa19.77■□□□□ 0.76
CLSTN1-202ENST00000377298 RABGAP1Q9Y3P9 1069 aa19.77■□□□□ 0.76
CLSTN1-202ENST00000377298 SOS2Q07890 1332 aaPredicted RBP19.77■□□□□ 0.76
CLSTN1-202ENST00000377298 CYP2J2P51589 502 aa19.77■□□□□ 0.76
CLSTN1-202ENST00000377298 SYCE1Q8N0S2 351 aa19.77■□□□□ 0.76
CLSTN1-202ENST00000377298 ARFGAP2Q8N6H7 521 aa19.77■□□□□ 0.76
CLSTN1-202ENST00000377298 K7ENM7 598 aa19.77■□□□□ 0.76
CLSTN1-202ENST00000377298 OSBPP22059 807 aa19.77■□□□□ 0.76
CLSTN1-202ENST00000377298 TERF1P54274 439 aa19.77■□□□□ 0.76
CLSTN1-202ENST00000377298 STRBPQ96SI9 672 aaKnown RBP19.77■□□□□ 0.76
CLSTN1-202ENST00000377298 FAM169AQ9Y6X4 670 aa19.77■□□□□ 0.76
CLSTN1-202ENST00000377298 LAMC1P11047 1609 aa19.77■□□□□ 0.75
CLSTN1-202ENST00000377298 RPN1P04843 607 aaKnown RBP19.77■□□□□ 0.75
CLSTN1-202ENST00000377298 CCDC25Q86WR0 208 aa19.77■□□□□ 0.75
CLSTN1-202ENST00000377298 GPR161Q8N6U8 529 aaKnown RBP19.77■□□□□ 0.75
CLSTN1-202ENST00000377298 PAIP2Q9BPZ3 127 aaKnown RBP19.77■□□□□ 0.75
CLSTN1-202ENST00000377298 XPO4Q9C0E2 1151 aaKnown RBP19.77■□□□□ 0.75
CLSTN1-202ENST00000377298 PPP2R3AQ06190 1150 aa19.76■□□□□ 0.75
CLSTN1-202ENST00000377298 CUL4AQ13619 759 aa19.76■□□□□ 0.75
CLSTN1-202ENST00000377298 LRCH2Q5VUJ6 765 aa19.76■□□□□ 0.75
CLSTN1-202ENST00000377298 RRAGAQ7L523 313 aa19.76■□□□□ 0.75
CLSTN1-202ENST00000377298 ABCA6Q8N139 1617 aa19.76■□□□□ 0.75
CLSTN1-202ENST00000377298 STAT2P52630 851 aa19.76■□□□□ 0.75
CLSTN1-202ENST00000377298 ARMC9Q7Z3E5 817 aa19.76■□□□□ 0.75
CLSTN1-202ENST00000377298 ADPGKQ9BRR6 497 aa19.76■□□□□ 0.75
CLSTN1-202ENST00000377298 WDR70Q9NW82 654 aa19.76■□□□□ 0.75
CLSTN1-202ENST00000377298 PRPF3O43395 683 aaKnown RBP19.76■□□□□ 0.75
CLSTN1-202ENST00000377298 GAS8O95995 478 aa19.76■□□□□ 0.75
CLSTN1-202ENST00000377298 TMOD1P28289 359 aa19.76■□□□□ 0.75
CLSTN1-202ENST00000377298 ADD3Q9UEY8 706 aaKnown RBP19.76■□□□□ 0.75
CLSTN1-202ENST00000377298 TSKSQ9UJT2 592 aa19.76■□□□□ 0.75
CLSTN1-202ENST00000377298 ACTN4O43707 911 aaKnown RBP19.76■□□□□ 0.75
CLSTN1-202ENST00000377298 LPXNO60711 386 aa19.76■□□□□ 0.75
CLSTN1-202ENST00000377298 NECTIN1Q15223 517 aa19.76■□□□□ 0.75
CLSTN1-202ENST00000377298 CLUL1Q15846 466 aa19.76■□□□□ 0.75
CLSTN1-202ENST00000377298 ARHGEF1Q92888 912 aaKnown RBP19.76■□□□□ 0.75
CLSTN1-202ENST00000377298 STAT1P42224 750 aa19.75■□□□□ 0.75
CLSTN1-202ENST00000377298 NDUFA8P51970 172 aa19.75■□□□□ 0.75
CLSTN1-202ENST00000377298 DGKHQ86XP1 1220 aa19.75■□□□□ 0.75
CLSTN1-202ENST00000377298 MYO3BQ8WXR4 1341 aa19.75■□□□□ 0.75
CLSTN1-202ENST00000377298 ARL1P40616 181 aaPredicted RBP19.75■□□□□ 0.75
CLSTN1-202ENST00000377298 DMP1Q13316 513 aaPredicted RBP19.75■□□□□ 0.75
CLSTN1-202ENST00000377298 ATP6V0A1Q93050 837 aa19.75■□□□□ 0.75
CLSTN1-202ENST00000377298 DYNLL2Q96FJ2 89 aa19.75■□□□□ 0.75
CLSTN1-202ENST00000377298 PIGSQ96S52 555 aa19.75■□□□□ 0.75
CLSTN1-202ENST00000377298 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.75■□□□□ 0.75
CLSTN1-202ENST00000377298 WDR11Q9BZH6 1224 aa19.75■□□□□ 0.75
CLSTN1-202ENST00000377298 FAM204AQ9H8W3 233 aa19.75■□□□□ 0.75
CLSTN1-202ENST00000377298 CDK8P49336 464 aa19.75■□□□□ 0.75
CLSTN1-202ENST00000377298 FAM47CQ5HY64 1035 aa19.75■□□□□ 0.75
CLSTN1-202ENST00000377298 OR8K1Q8NGG5 319 aa19.75■□□□□ 0.75
CLSTN1-202ENST00000377298 ERO1AQ96HE7 468 aa19.75■□□□□ 0.75
CLSTN1-202ENST00000377298 CEP152O94986 1710 aa19.75■□□□□ 0.75
CLSTN1-202ENST00000377298 CALRP27797 417 aaKnown RBP19.75■□□□□ 0.75
CLSTN1-202ENST00000377298 TRIM28Q13263 835 aaKnown RBP19.75■□□□□ 0.75
CLSTN1-202ENST00000377298 TBC1D9BQ66K14 1250 aa19.75■□□□□ 0.75
CLSTN1-202ENST00000377298 ZNF365Q70YC5 407 aa19.75■□□□□ 0.75
CLSTN1-202ENST00000377298 PODNQ7Z5L7 613 aa19.75■□□□□ 0.75
CLSTN1-202ENST00000377298 FAM160B2Q86V87 743 aa19.75■□□□□ 0.75
CLSTN1-202ENST00000377298 NLRC4Q9NPP4 1024 aa19.75■□□□□ 0.75
CLSTN1-202ENST00000377298 CAMSAP1Q5T5Y3 1602 aa19.75■□□□□ 0.75
CLSTN1-202ENST00000377298 EVCP57679 992 aa19.74■□□□□ 0.75
CLSTN1-202ENST00000377298 PKP1Q13835 747 aa19.74■□□□□ 0.75
CLSTN1-202ENST00000377298 ARHGAP44Q17R89 818 aa19.74■□□□□ 0.75
CLSTN1-202ENST00000377298 CFAP58Q5T655 872 aa19.74■□□□□ 0.75
CLSTN1-202ENST00000377298 SYDE2Q5VT97 1194 aa19.74■□□□□ 0.75
CLSTN1-202ENST00000377298 C8orf74Q6P047 294 aa19.74■□□□□ 0.75
CLSTN1-202ENST00000377298 SLC17A8Q8NDX2 589 aa19.74■□□□□ 0.75
CLSTN1-202ENST00000377298 GSDMAQ96QA5 445 aa19.74■□□□□ 0.75
CLSTN1-202ENST00000377298 LSM14BQ9BX40 385 aaKnown RBP19.74■□□□□ 0.75
CLSTN1-202ENST00000377298 QRICH2Q9H0J4 1663 aa19.74■□□□□ 0.75
CLSTN1-202ENST00000377298 E9PCH4 1651 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms