RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 TOM1O60784 492 aa10.86□□□□□ -0.67
TRIM39-202ENST00000376659 KIF5BP33176 963 aa10.86□□□□□ -0.67
TRIM39-202ENST00000376659 WDR59Q6PJI9 974 aa10.86□□□□□ -0.67
TRIM39-202ENST00000376659 ZNF804AQ7Z570 1209 aa10.86□□□□□ -0.67
TRIM39-202ENST00000376659 DZIP1Q86YF9 867 aaKnown RBP10.86□□□□□ -0.67
TRIM39-202ENST00000376659 CNBD1Q8NA66 436 aa10.86□□□□□ -0.67
TRIM39-202ENST00000376659 DNAJC7Q99615 494 aa10.86□□□□□ -0.67
TRIM39-202ENST00000376659 NAA15Q9BXJ9 866 aaKnown RBP10.86□□□□□ -0.67
TRIM39-202ENST00000376659 DDX4Q9NQI0 724 aaKnown RBP10.86□□□□□ -0.67
TRIM39-202ENST00000376659 COBLO75128 1261 aa10.86□□□□□ -0.67
TRIM39-202ENST00000376659 MYL1P05976 194 aa10.86□□□□□ -0.67
TRIM39-202ENST00000376659 GSTO1P78417 241 aa10.86□□□□□ -0.67
TRIM39-202ENST00000376659 KARSQ15046 597 aaKnown RBP10.86□□□□□ -0.67
TRIM39-202ENST00000376659 MIIPQ5JXC2 388 aa10.86□□□□□ -0.67
TRIM39-202ENST00000376659 CERS3Q8IU89 383 aa10.86□□□□□ -0.67
TRIM39-202ENST00000376659 IQUBQ8NA54 791 aa10.86□□□□□ -0.67
TRIM39-202ENST00000376659 CRAMP1Q96RY5 1269 aa10.86□□□□□ -0.67
TRIM39-202ENST00000376659 KAT14Q9H8E8 782 aa10.86□□□□□ -0.67
TRIM39-202ENST00000376659 ABHD10Q9NUJ1 306 aa10.86□□□□□ -0.67
TRIM39-202ENST00000376659 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.86□□□□□ -0.67
TRIM39-202ENST00000376659 V9GYY5 206 aaPredicted RBP10.86□□□□□ -0.67
TRIM39-202ENST00000376659 AMPD2Q01433 879 aa10.85□□□□□ -0.67
TRIM39-202ENST00000376659 ERCC6LQ2NKX8 1250 aa10.85□□□□□ -0.67
TRIM39-202ENST00000376659 ZSCAN29Q8IWY8 852 aaPredicted RBP10.85□□□□□ -0.67
TRIM39-202ENST00000376659 STAMQ92783 540 aa10.85□□□□□ -0.67
TRIM39-202ENST00000376659 SECISBP2LQ93073 1101 aaKnown RBP10.85□□□□□ -0.67
TRIM39-202ENST00000376659 CEP95Q96GE4 821 aa10.85□□□□□ -0.67
TRIM39-202ENST00000376659 DAGLAQ9Y4D2 1042 aa10.85□□□□□ -0.67
TRIM39-202ENST00000376659 SMCHD1A6NHR9 2005 aa10.85□□□□□ -0.67
TRIM39-202ENST00000376659 CCP110O43303 1012 aa10.85□□□□□ -0.67
TRIM39-202ENST00000376659 PDHBP11177 359 aa10.85□□□□□ -0.67
TRIM39-202ENST00000376659 ATP2B4P23634 1241 aa10.85□□□□□ -0.67
TRIM39-202ENST00000376659 CDC25AP30304 524 aa10.85□□□□□ -0.67
TRIM39-202ENST00000376659 NLRP5P59047 1200 aa10.85□□□□□ -0.67
TRIM39-202ENST00000376659 ORC2Q13416 577 aaPredicted RBP10.85□□□□□ -0.67
TRIM39-202ENST00000376659 MEA1Q16626 185 aa10.85□□□□□ -0.67
TRIM39-202ENST00000376659 CCDC178Q5BJE1 867 aa10.85□□□□□ -0.67
TRIM39-202ENST00000376659 TRAPPC3LQ5T215 181 aa10.85□□□□□ -0.67
TRIM39-202ENST00000376659 ZNF662Q6ZS27 426 aa10.85□□□□□ -0.67
TRIM39-202ENST00000376659 MAPKAPK5Q8IW41 473 aa10.85□□□□□ -0.67
TRIM39-202ENST00000376659 CRYGNQ8WXF5 182 aa10.85□□□□□ -0.67
TRIM39-202ENST00000376659 LZTS2Q9BRK4 669 aa10.85□□□□□ -0.67
TRIM39-202ENST00000376659 PYM1Q9BRP8 204 aaKnown RBP10.85□□□□□ -0.67
TRIM39-202ENST00000376659 WDR81Q562E7 1941 aa10.85□□□□□ -0.67
TRIM39-202ENST00000376659 AKR1B15C9JRZ8 316 aaPredicted RBP10.85□□□□□ -0.67
TRIM39-202ENST00000376659 SLC4A8Q2Y0W8 1093 aa10.85□□□□□ -0.67
TRIM39-202ENST00000376659 C7orf25Q9BPX7 421 aa10.85□□□□□ -0.67
TRIM39-202ENST00000376659 DESI2Q9BSY9 194 aa10.85□□□□□ -0.67
TRIM39-202ENST00000376659 DNAJC18Q9H819 358 aa10.85□□□□□ -0.67
TRIM39-202ENST00000376659 BRMS1Q9HCU9 246 aa10.85□□□□□ -0.67
TRIM39-202ENST00000376659 TRIM49BA6NDI0 452 aa10.84□□□□□ -0.67
TRIM39-202ENST00000376659 CASP14P31944 242 aa10.84□□□□□ -0.67
TRIM39-202ENST00000376659 CLCN6P51797 869 aa10.84□□□□□ -0.67
TRIM39-202ENST00000376659 COPB1P53618 953 aaKnown RBP10.84□□□□□ -0.67
TRIM39-202ENST00000376659 ZRSR1Q15695 479 aaKnown RBP10.84□□□□□ -0.67
TRIM39-202ENST00000376659 ZNF592Q92610 1267 aa10.84□□□□□ -0.67
TRIM39-202ENST00000376659 CPVLQ9H3G5 476 aa10.84□□□□□ -0.67
TRIM39-202ENST00000376659 BLOC1S4Q9NUP1 217 aa10.84□□□□□ -0.67
TRIM39-202ENST00000376659 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.84□□□□□ -0.67
TRIM39-202ENST00000376659 STX17P56962 302 aa10.84□□□□□ -0.67
TRIM39-202ENST00000376659 PIP4K2BP78356 416 aa10.84□□□□□ -0.67
TRIM39-202ENST00000376659 PAK1Q13153 545 aa10.84□□□□□ -0.67
TRIM39-202ENST00000376659 INF2Q27J81 1249 aa10.84□□□□□ -0.67
TRIM39-202ENST00000376659 KIAA0895Q8NCT3 520 aa10.84□□□□□ -0.67
TRIM39-202ENST00000376659 NELFBQ8WX92 580 aa10.84□□□□□ -0.67
TRIM39-202ENST00000376659 PNMA5Q96PV4 448 aa10.84□□□□□ -0.67
TRIM39-202ENST00000376659 IRX2Q9BZI1 471 aaPredicted RBP10.84□□□□□ -0.67
TRIM39-202ENST00000376659 A0A1W2PQC6 194 aa10.84□□□□□ -0.67
TRIM39-202ENST00000376659 ATP2B1P20020 1258 aa10.84□□□□□ -0.67
TRIM39-202ENST00000376659 AKAP17AQ02040 695 aaKnown RBP10.84□□□□□ -0.67
TRIM39-202ENST00000376659 TMEM119Q4V9L6 283 aa10.84□□□□□ -0.67
TRIM39-202ENST00000376659 CCDC51Q96ER9 411 aa10.84□□□□□ -0.67
TRIM39-202ENST00000376659 NGLY1Q96IV0 654 aa10.84□□□□□ -0.67
TRIM39-202ENST00000376659 PURBQ96QR8 312 aaKnown RBP10.84□□□□□ -0.67
TRIM39-202ENST00000376659 SAP30BPQ9UHR5 308 aaKnown RBP10.84□□□□□ -0.67
TRIM39-202ENST00000376659 EFCAB8A8MWE9 144 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 SHMT1P34896 483 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 FXR2P51116 673 aaKnown RBP eCLIP10.83□□□□□ -0.68
TRIM39-202ENST00000376659 GRB10Q13322 594 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 CTAGE1Q96RT6 745 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 THAP9Q9H5L6 903 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 MAGEF1Q9HAY2 307 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 ATF5Q9Y2D1 282 aaPredicted RBP10.83□□□□□ -0.68
TRIM39-202ENST00000376659 SPDYE4A6NLX3 237 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 LGALS16A8MUM7 142 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 KCNJ18B7U540 433 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 SASH3O75995 380 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 GOLGA8HP0CJ92 632 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 KCNJ12Q14500 433 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 TXNRD1Q16881 649 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 SLC27A3Q5K4L6 730 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 AKT1S1Q96B36 256 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 AK8Q96MA6 479 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 EYA3Q99504 573 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 TRIM9Q9C026 710 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 CUEDC2Q9H467 287 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 MTMR4Q9NYA4 1195 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 USP17L5A8MUK1 530 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 KLRF2D3W0D1 207 aa10.83□□□□□ -0.68
TRIM39-202ENST00000376659 ZSCAN12O43309 604 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms