RNA–Protein interactions for RNA: ENST00000376303.6

SYP-202, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 858 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-202ENST00000376303 ZHX1Q9UKY1 873 aaPredicted RBP20.83■□□□□ 0.93
SYP-202ENST00000376303 TACC3Q9Y6A5 838 aa20.83■□□□□ 0.93
SYP-202ENST00000376303 COL6A3P12111 3177 aa20.83■□□□□ 0.93
SYP-202ENST00000376303 ZNF536O15090 1300 aa20.82■□□□□ 0.92
SYP-202ENST00000376303 ZMYM6O95789 1325 aa20.82■□□□□ 0.92
SYP-202ENST00000376303 LAMA2P24043 3122 aaKnown RBP20.82■□□□□ 0.92
SYP-202ENST00000376303 HSPD1P10809 573 aaKnown RBP20.82■□□□□ 0.92
SYP-202ENST00000376303 ACVR2BQ13705 512 aa20.82■□□□□ 0.92
SYP-202ENST00000376303 TKFCQ3LXA3 575 aa20.82■□□□□ 0.92
SYP-202ENST00000376303 KCTD1Q719H9 257 aa20.82■□□□□ 0.92
SYP-202ENST00000376303 PRDM5Q9NQX1 630 aaPredicted RBP20.82■□□□□ 0.92
SYP-202ENST00000376303 HOMER2Q9NSB8 354 aa20.82■□□□□ 0.92
SYP-202ENST00000376303 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.82■□□□□ 0.92
SYP-202ENST00000376303 A0A1W2PQ45 241 aaPredicted RBP20.81■□□□□ 0.92
SYP-202ENST00000376303 A0A1W2PQY0 241 aa20.81■□□□□ 0.92
SYP-202ENST00000376303 DUSP11O75319 330 aaKnown RBP20.81■□□□□ 0.92
SYP-202ENST00000376303 NMIQ13287 307 aaPredicted RBP20.81■□□□□ 0.92
SYP-202ENST00000376303 RILPL2Q969X0 211 aa20.81■□□□□ 0.92
SYP-202ENST00000376303 LENG1Q96BZ8 264 aaPredicted RBP20.81■□□□□ 0.92
SYP-202ENST00000376303 CHMP4CQ96CF2 233 aa20.81■□□□□ 0.92
SYP-202ENST00000376303 FGD4Q96M96 766 aa20.81■□□□□ 0.92
SYP-202ENST00000376303 AGBL1Q96MI9 1066 aa20.81■□□□□ 0.92
SYP-202ENST00000376303 PDLIM7Q9NR12 457 aa20.81■□□□□ 0.92
SYP-202ENST00000376303 TOMM22Q9NS69 142 aa20.81■□□□□ 0.92
SYP-202ENST00000376303 RNF146Q9NTX7 359 aa20.81■□□□□ 0.92
SYP-202ENST00000376303 SYNRGQ9UMZ2 1314 aa20.8■□□□□ 0.92
SYP-202ENST00000376303 MOXD2PA6NHM9 499 aa20.8■□□□□ 0.92
SYP-202ENST00000376303 POTEB2H3BUK9 544 aa20.8■□□□□ 0.92
SYP-202ENST00000376303 TLE2Q04725 743 aa20.8■□□□□ 0.92
SYP-202ENST00000376303 B4GALNT3Q6L9W6 998 aa20.8■□□□□ 0.92
SYP-202ENST00000376303 ARMCX2Q7L311 632 aa20.8■□□□□ 0.92
SYP-202ENST00000376303 ZNF589Q86UQ0 364 aaPredicted RBP20.8■□□□□ 0.92
SYP-202ENST00000376303 DEFB123Q8N688 67 aa20.8■□□□□ 0.92
SYP-202ENST00000376303 KLHDC9Q8NEP7 349 aa20.8■□□□□ 0.92
SYP-202ENST00000376303 NUP133Q8WUM0 1156 aa20.8■□□□□ 0.92
SYP-202ENST00000376303 DCAF4Q8WV16 495 aa20.8■□□□□ 0.92
SYP-202ENST00000376303 TRERF1Q96PN7 1200 aa20.8■□□□□ 0.92
SYP-202ENST00000376303 TCP11L1Q9NUJ3 509 aa20.8■□□□□ 0.92
SYP-202ENST00000376303 PRR12Q9ULL5 1215 aa20.8■□□□□ 0.92
SYP-202ENST00000376303 CCDC171Q6TFL3 1326 aa20.79■□□□□ 0.92
SYP-202ENST00000376303 PCP11498 1178 aaKnown RBP20.79■□□□□ 0.92
SYP-202ENST00000376303 ACLYP53396 1101 aa20.79■□□□□ 0.92
SYP-202ENST00000376303 MFAP1P55081 439 aaKnown RBP20.79■□□□□ 0.92
SYP-202ENST00000376303 RRP12Q5JTH9 1297 aaKnown RBP20.79■□□□□ 0.92
SYP-202ENST00000376303 CHD1LQ86WJ1 897 aa20.79■□□□□ 0.92
SYP-202ENST00000376303 CCDC144CPQ8IYA2 1237 aa20.79■□□□□ 0.92
SYP-202ENST00000376303 FAM133AQ8N9E0 248 aa20.79■□□□□ 0.92
SYP-202ENST00000376303 OSBPL3Q9H4L5 887 aa20.79■□□□□ 0.92
SYP-202ENST00000376303 A1CFQ9NQ94 594 aaKnown RBP20.79■□□□□ 0.92
SYP-202ENST00000376303 TRIM43BA6NCK2 446 aa20.78■□□□□ 0.92
SYP-202ENST00000376303 TOP1P11387 765 aaKnown RBP20.78■□□□□ 0.92
SYP-202ENST00000376303 ALAS1P13196 640 aa20.78■□□□□ 0.92
SYP-202ENST00000376303 CST5P28325 142 aaPredicted RBP20.78■□□□□ 0.92
SYP-202ENST00000376303 CNTN2Q02246 1040 aa20.78■□□□□ 0.92
SYP-202ENST00000376303 KCNA10Q16322 511 aa20.78■□□□□ 0.92
SYP-202ENST00000376303 CCDC144BQ3MJ40 725 aa20.78■□□□□ 0.92
SYP-202ENST00000376303 CCDC174Q6PII3 467 aa20.78■□□□□ 0.92
SYP-202ENST00000376303 PLEKHM2Q8IWE5 1019 aa20.78■□□□□ 0.92
SYP-202ENST00000376303 BADQ92934 168 aa20.78■□□□□ 0.92
SYP-202ENST00000376303 TRIM43Q96BQ3 446 aaPredicted RBP20.78■□□□□ 0.92
SYP-202ENST00000376303 SPC25Q9HBM1 224 aa20.78■□□□□ 0.92
SYP-202ENST00000376303 STARD7Q9NQZ5 370 aa20.78■□□□□ 0.92
SYP-202ENST00000376303 MTMR7Q9Y216 660 aa20.78■□□□□ 0.92
SYP-202ENST00000376303 ASB14A6NK59 587 aa20.77■□□□□ 0.92
SYP-202ENST00000376303 IGHDP01880 384 aa20.77■□□□□ 0.92
SYP-202ENST00000376303 CLTBP09497 229 aa20.77■□□□□ 0.92
SYP-202ENST00000376303 SDSP20132 328 aa20.77■□□□□ 0.92
SYP-202ENST00000376303 NUCB1Q02818 461 aa20.77■□□□□ 0.92
SYP-202ENST00000376303 CCDC96Q2M329 555 aa20.77■□□□□ 0.92
SYP-202ENST00000376303 CCSAPQ6IQ19 270 aaPredicted RBP20.77■□□□□ 0.92
SYP-202ENST00000376303 RASGRP2Q7LDG7 609 aa20.77■□□□□ 0.92
SYP-202ENST00000376303 SH3RF1Q7Z6J0 888 aa20.77■□□□□ 0.92
SYP-202ENST00000376303 PCSK9Q8NBP7 692 aaKnown RBP20.77■□□□□ 0.92
SYP-202ENST00000376303 TOX2Q96NM4 488 aa20.77■□□□□ 0.92
SYP-202ENST00000376303 TMEM47Q9BQJ4 181 aa20.77■□□□□ 0.92
SYP-202ENST00000376303 C6orf222P0C671 652 aaPredicted RBP20.76■□□□□ 0.91
SYP-202ENST00000376303 GJA9P57773 515 aa20.76■□□□□ 0.91
SYP-202ENST00000376303 HAND2P61296 217 aa20.76■□□□□ 0.91
SYP-202ENST00000376303 AKNAD1Q5T1N1 836 aa20.76■□□□□ 0.91
SYP-202ENST00000376303 BTNL9Q6UXG8 535 aa20.76■□□□□ 0.91
SYP-202ENST00000376303 MFSD6Q6ZSS7 791 aa20.76■□□□□ 0.91
SYP-202ENST00000376303 Q7L0L9 218 aa20.76■□□□□ 0.91
SYP-202ENST00000376303 TTC14Q96N46 770 aa20.76■□□□□ 0.91
SYP-202ENST00000376303 KATNBL1Q9H079 304 aa20.76■□□□□ 0.91
SYP-202ENST00000376303 UPF3AQ9H1J1 476 aaKnown RBP20.76■□□□□ 0.91
SYP-202ENST00000376303 CCPG1Q9ULG6 757 aa20.76■□□□□ 0.91
SYP-202ENST00000376303 ADCY6O43306 1168 aa20.75■□□□□ 0.91
SYP-202ENST00000376303 PQBP1O60828 265 aaKnown RBP20.75■□□□□ 0.91
SYP-202ENST00000376303 ICAM1P05362 532 aa20.75■□□□□ 0.91
SYP-202ENST00000376303 SNAP25P60880 206 aa20.75■□□□□ 0.91
SYP-202ENST00000376303 ANKRD33Q7Z3H0 272 aa20.75■□□□□ 0.91
SYP-202ENST00000376303 EXOC6Q8TAG9 804 aa20.75■□□□□ 0.91
SYP-202ENST00000376303 GLT1D1Q96MS3 346 aa20.75■□□□□ 0.91
SYP-202ENST00000376303 RANBP17Q9H2T7 1088 aaKnown RBP20.75■□□□□ 0.91
SYP-202ENST00000376303 RNF41Q9H4P4 317 aaPredicted RBP20.75■□□□□ 0.91
SYP-202ENST00000376303 MTMR10Q9NXD2 777 aa20.75■□□□□ 0.91
SYP-202ENST00000376303 ELP1O95163 1332 aa20.75■□□□□ 0.91
SYP-202ENST00000376303 LCTP09848 1927 aa20.74■□□□□ 0.91
SYP-202ENST00000376303 LAMA4Q16363 1823 aa20.74■□□□□ 0.91
SYP-202ENST00000376303 MYADML2A6NDP7 307 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms