RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 SLC38A10Q9HBR0 1119 aa26.44■■□□□ 1.82
HLA-C-202ENST00000376237 CTDP1Q9Y5B0 961 aaPredicted RBP26.44■■□□□ 1.82
HLA-C-202ENST00000376237 H3BQV1 296 aa26.44■■□□□ 1.82
HLA-C-202ENST00000376237 VWA5AO00534 786 aa26.44■■□□□ 1.82
HLA-C-202ENST00000376237 STX6O43752 255 aa26.44■■□□□ 1.82
HLA-C-202ENST00000376237 NUCB2P80303 420 aa26.44■■□□□ 1.82
HLA-C-202ENST00000376237 DEFB115Q30KQ5 88 aa26.44■■□□□ 1.82
HLA-C-202ENST00000376237 IFFO2Q5TF58 517 aa26.44■■□□□ 1.82
HLA-C-202ENST00000376237 SAMD1Q6SPF0 538 aaPredicted RBP26.44■■□□□ 1.82
HLA-C-202ENST00000376237 HEATR3Q7Z4Q2 680 aa26.44■■□□□ 1.82
HLA-C-202ENST00000376237 FBXO11Q86XK2 927 aa26.44■■□□□ 1.82
HLA-C-202ENST00000376237 AIFM3Q96NN9 605 aa26.44■■□□□ 1.82
HLA-C-202ENST00000376237 LBX2Q6XYB7 198 aa26.43■■□□□ 1.82
HLA-C-202ENST00000376237 CCDC148Q8NFR7 591 aa26.43■■□□□ 1.82
HLA-C-202ENST00000376237 ATG4CQ96DT6 458 aa26.43■■□□□ 1.82
HLA-C-202ENST00000376237 ASCC2Q9H1I8 757 aaPredicted RBP26.43■■□□□ 1.82
HLA-C-202ENST00000376237 OAZ1P54368 228 aa26.42■■□□□ 1.82
HLA-C-202ENST00000376237 WWC2Q6AWC2 1192 aa26.42■■□□□ 1.82
HLA-C-202ENST00000376237 PPP1R18Q6NYC8 613 aa26.42■■□□□ 1.82
HLA-C-202ENST00000376237 MB21D1Q8N884 522 aa26.42■■□□□ 1.82
HLA-C-202ENST00000376237 ZCCHC17Q9NP64 241 aaKnown RBP26.42■■□□□ 1.82
HLA-C-202ENST00000376237 CHMP5Q9NZZ3 219 aa26.42■■□□□ 1.82
HLA-C-202ENST00000376237 SPDYE16A6NNV3 312 aaPredicted RBP26.41■■□□□ 1.82
HLA-C-202ENST00000376237 BTBD19C9JJ37 291 aa26.41■■□□□ 1.82
HLA-C-202ENST00000376237 SREBF2Q12772 1141 aa26.41■■□□□ 1.82
HLA-C-202ENST00000376237 PAXIP1Q6ZW49 1069 aaPredicted RBP26.41■■□□□ 1.82
HLA-C-202ENST00000376237 GTF3C2Q8WUA4 911 aaPredicted RBP26.41■■□□□ 1.82
HLA-C-202ENST00000376237 VPS54Q9P1Q0 977 aa26.41■■□□□ 1.82
HLA-C-202ENST00000376237 BAZ2BQ9UIF8 2168 aaKnown RBP26.41■■□□□ 1.82
HLA-C-202ENST00000376237 WDR33Q9C0J8 1336 aaKnown RBP26.4■■□□□ 1.82
HLA-C-202ENST00000376237 STXBP3O00186 592 aa26.4■■□□□ 1.82
HLA-C-202ENST00000376237 PDHXO00330 501 aa26.4■■□□□ 1.82
HLA-C-202ENST00000376237 PPP1R11O60927 126 aaPredicted RBP26.4■■□□□ 1.82
HLA-C-202ENST00000376237 ICAM1P05362 532 aa26.4■■□□□ 1.82
HLA-C-202ENST00000376237 NOGQ13253 232 aa26.4■■□□□ 1.82
HLA-C-202ENST00000376237 KRT40Q6A162 431 aa26.4■■□□□ 1.82
HLA-C-202ENST00000376237 GPKOWQ92917 476 aaPredicted RBP eCLIP26.4■■□□□ 1.82
HLA-C-202ENST00000376237 P2RX7Q99572 595 aaKnown RBP26.4■■□□□ 1.82
HLA-C-202ENST00000376237 PCDHA1Q9Y5I3 950 aa26.4■■□□□ 1.82
HLA-C-202ENST00000376237 ATP2A1O14983 1001 aa26.39■■□□□ 1.82
HLA-C-202ENST00000376237 CALML3P27482 149 aa26.39■■□□□ 1.82
HLA-C-202ENST00000376237 NAPAP54920 295 aa26.39■■□□□ 1.82
HLA-C-202ENST00000376237 SNAP25P60880 206 aa26.39■■□□□ 1.82
HLA-C-202ENST00000376237 GALNT17Q6IS24 598 aa26.39■■□□□ 1.82
HLA-C-202ENST00000376237 ESYT2A0FGR8 921 aa26.39■■□□□ 1.81
HLA-C-202ENST00000376237 VPS37CA5D8V6 355 aaPredicted RBP26.39■■□□□ 1.81
HLA-C-202ENST00000376237 NLRP5P59047 1200 aa26.39■■□□□ 1.81
HLA-C-202ENST00000376237 HERVK_113P62684 666 aa26.39■■□□□ 1.81
HLA-C-202ENST00000376237 SAFBQ15424 915 aaKnown RBP eCLIP26.39■■□□□ 1.81
HLA-C-202ENST00000376237 OTUD7BQ6GQQ9 843 aa26.39■■□□□ 1.81
HLA-C-202ENST00000376237 CYP4F22Q6NT55 531 aa26.39■■□□□ 1.81
HLA-C-202ENST00000376237 CCDC174Q6PII3 467 aa26.39■■□□□ 1.81
HLA-C-202ENST00000376237 PTPN18Q99952 460 aa26.39■■□□□ 1.81
HLA-C-202ENST00000376237 PHF20Q9BVI0 1012 aa26.39■■□□□ 1.81
HLA-C-202ENST00000376237 ZNF536O15090 1300 aa26.38■■□□□ 1.81
HLA-C-202ENST00000376237 MMP1P03956 469 aa26.38■■□□□ 1.81
HLA-C-202ENST00000376237 TEX2Q8IWB9 1127 aa26.38■■□□□ 1.81
HLA-C-202ENST00000376237 REM2Q8IYK8 340 aaPredicted RBP26.38■■□□□ 1.81
HLA-C-202ENST00000376237 REPS2Q8NFH8 660 aa26.38■■□□□ 1.81
HLA-C-202ENST00000376237 COA7Q96BR5 231 aa26.38■■□□□ 1.81
HLA-C-202ENST00000376237 ZMYND12Q9H0C1 365 aa26.38■■□□□ 1.81
HLA-C-202ENST00000376237 GJB4Q9NTQ9 266 aa26.38■■□□□ 1.81
HLA-C-202ENST00000376237 MTMR6Q9Y217 621 aa26.38■■□□□ 1.81
HLA-C-202ENST00000376237 GNA11P29992 359 aa26.37■■□□□ 1.81
HLA-C-202ENST00000376237 FOSBP53539 338 aa26.37■■□□□ 1.81
HLA-C-202ENST00000376237 GUCY1B3Q02153 619 aa26.37■■□□□ 1.81
HLA-C-202ENST00000376237 FAM43AQ8N2R8 423 aa26.37■■□□□ 1.81
HLA-C-202ENST00000376237 GLT8D2Q9H1C3 349 aa26.37■■□□□ 1.81
HLA-C-202ENST00000376237 BRMS1Q9HCU9 246 aa26.37■■□□□ 1.81
HLA-C-202ENST00000376237 C6orf50Q9HD87 102 aa26.37■■□□□ 1.81
HLA-C-202ENST00000376237 CCPG1Q9ULG6 757 aa26.37■■□□□ 1.81
HLA-C-202ENST00000376237 MYH6P13533 1939 aa26.36■■□□□ 1.81
HLA-C-202ENST00000376237 ABCB11O95342 1321 aa26.36■■□□□ 1.81
HLA-C-202ENST00000376237 BRD1O95696 1058 aa26.36■■□□□ 1.81
HLA-C-202ENST00000376237 TM4SF4P48230 202 aa26.36■■□□□ 1.81
HLA-C-202ENST00000376237 TYW1BQ6NUM6 668 aa26.36■■□□□ 1.81
HLA-C-202ENST00000376237 CPXCR1Q8N123 301 aa26.36■■□□□ 1.81
HLA-C-202ENST00000376237 CAPNS2Q96L46 248 aa26.36■■□□□ 1.81
HLA-C-202ENST00000376237 PARK7Q99497 189 aaKnown RBP26.36■■□□□ 1.81
HLA-C-202ENST00000376237 RAVER2Q9HCJ3 691 aaKnown RBP26.36■■□□□ 1.81
HLA-C-202ENST00000376237 KCNJ14Q9UNX9 436 aa26.36■■□□□ 1.81
HLA-C-202ENST00000376237 MRPL11Q9Y3B7 192 aaKnown RBP26.36■■□□□ 1.81
HLA-C-202ENST00000376237 RLFQ13129 1914 aa26.35■■□□□ 1.81
HLA-C-202ENST00000376237 SMCO2A6NFE2 343 aa26.35■■□□□ 1.81
HLA-C-202ENST00000376237 ZSCAN22P10073 491 aaPredicted RBP26.35■■□□□ 1.81
HLA-C-202ENST00000376237 USH1GQ495M9 461 aa26.35■■□□□ 1.81
HLA-C-202ENST00000376237 BICD2Q8TD16 824 aa26.35■■□□□ 1.81
HLA-C-202ENST00000376237 SHISA4Q96DD7 197 aa26.35■■□□□ 1.81
HLA-C-202ENST00000376237 TEX13BQ9BXU2 312 aa26.35■■□□□ 1.81
HLA-C-202ENST00000376237 ZNF214Q9UL59 606 aaPredicted RBP26.35■■□□□ 1.81
HLA-C-202ENST00000376237 RABGAP1Q9Y3P9 1069 aa26.35■■□□□ 1.81
HLA-C-202ENST00000376237 GCLCP48506 637 aaPredicted RBP26.34■■□□□ 1.81
HLA-C-202ENST00000376237 KIF23Q02241 960 aaPredicted RBP26.34■■□□□ 1.81
HLA-C-202ENST00000376237 PKP1Q13835 747 aa26.34■■□□□ 1.81
HLA-C-202ENST00000376237 TMEM132BQ14DG7 1078 aa26.34■■□□□ 1.81
HLA-C-202ENST00000376237 IFNL1Q8IU54 200 aa26.34■■□□□ 1.81
HLA-C-202ENST00000376237 DAGLBQ8NCG7 672 aa26.34■■□□□ 1.81
HLA-C-202ENST00000376237 SMCR8Q8TEV9 937 aaPredicted RBP26.34■■□□□ 1.81
HLA-C-202ENST00000376237 AGBL1Q96MI9 1066 aa26.34■■□□□ 1.81
HLA-C-202ENST00000376237 PCDHA4Q9UN74 947 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms