RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 P2RX5Q93086 422 aa18.6■□□□□ 0.57
VARS-215ENST00000375663 EYA3Q99504 573 aa18.6■□□□□ 0.57
VARS-215ENST00000375663 ADGRG1Q9Y653 693 aa18.6■□□□□ 0.57
VARS-215ENST00000375663 OVOS2A0A0J9YW53 1432 aa18.6■□□□□ 0.57
VARS-215ENST00000375663 OVOS2Q6IE36 1432 aa18.6■□□□□ 0.57
VARS-215ENST00000375663 WDR19Q8NEZ3 1342 aa18.59■□□□□ 0.57
VARS-215ENST00000375663 PRPF3O43395 683 aaKnown RBP18.59■□□□□ 0.57
VARS-215ENST00000375663 DYNLL1P63167 89 aaKnown RBP18.59■□□□□ 0.57
VARS-215ENST00000375663 SF3A3Q12874 501 aaKnown RBP eCLIP18.59■□□□□ 0.578e-7■■■■■ 32.7
VARS-215ENST00000375663 RABL6Q3YEC7 729 aaPredicted RBP18.59■□□□□ 0.57
VARS-215ENST00000375663 CAMSAP1Q5T5Y3 1602 aa18.59■□□□□ 0.57
VARS-215ENST00000375663 POLR2FP61218 127 aaKnown RBP18.59■□□□□ 0.57
VARS-215ENST00000375663 RASSF7Q02833 373 aa18.59■□□□□ 0.57
VARS-215ENST00000375663 MTMR3Q13615 1198 aa18.59■□□□□ 0.57
VARS-215ENST00000375663 GSTA5Q7RTV2 222 aa18.59■□□□□ 0.57
VARS-215ENST00000375663 PXDNLA1KZ92 1463 aa18.59■□□□□ 0.57
VARS-215ENST00000375663 CALUO43852 315 aaPredicted RBP18.59■□□□□ 0.57
VARS-215ENST00000375663 PRR29P0C7W0 189 aa18.59■□□□□ 0.57
VARS-215ENST00000375663 PPP4R3AQ6IN85 833 aa18.59■□□□□ 0.57
VARS-215ENST00000375663 SEMA3EO15041 775 aa18.58■□□□□ 0.57
VARS-215ENST00000375663 UFL1O94874 794 aa18.58■□□□□ 0.57
VARS-215ENST00000375663 ZBED6P86452 979 aa18.58■□□□□ 0.57
VARS-215ENST00000375663 DNM3Q9UQ16 869 aa18.58■□□□□ 0.57
VARS-215ENST00000375663 IKBKGQ9Y6K9 419 aa18.58■□□□□ 0.57
VARS-215ENST00000375663 DLC1Q96QB1 1528 aa18.58■□□□□ 0.57
VARS-215ENST00000375663 NEDD4P46934 1319 aa18.58■□□□□ 0.57
VARS-215ENST00000375663 CYP2D7A0A087X1C5 515 aa18.58■□□□□ 0.57
VARS-215ENST00000375663 RIMBP2O15034 1052 aa18.58■□□□□ 0.57
VARS-215ENST00000375663 GNPATO15228 680 aa18.58■□□□□ 0.57
VARS-215ENST00000375663 EEF2P13639 858 aaKnown RBP18.58■□□□□ 0.57
VARS-215ENST00000375663 TCP11X2Q5H9J9 407 aa18.58■□□□□ 0.57
VARS-215ENST00000375663 CCDC50Q8IVM0 306 aa18.58■□□□□ 0.57
VARS-215ENST00000375663 ABCA9Q8IUA7 1624 aa18.58■□□□□ 0.56
VARS-215ENST00000375663 EHHADHQ08426 723 aa18.58■□□□□ 0.56
VARS-215ENST00000375663 NYAP1Q6ZVC0 841 aa18.58■□□□□ 0.56
VARS-215ENST00000375663 METTL16Q86W50 562 aaKnown RBP18.58■□□□□ 0.56
VARS-215ENST00000375663 KCNB2Q92953 911 aa18.58■□□□□ 0.56
VARS-215ENST00000375663 NT5C3AQ9H0P0 336 aa18.58■□□□□ 0.56
VARS-215ENST00000375663 GDAQ9Y2T3 454 aa18.58■□□□□ 0.56
VARS-215ENST00000375663 UBN2Q6ZU65 1347 aa18.58■□□□□ 0.56
VARS-215ENST00000375663 MYO1CO00159 1063 aa18.58■□□□□ 0.56
VARS-215ENST00000375663 PPFIA4O75335 1185 aa18.58■□□□□ 0.56
VARS-215ENST00000375663 CXCR5P32302 372 aa18.58■□□□□ 0.56
VARS-215ENST00000375663 SCARF1Q14162 830 aa18.58■□□□□ 0.56
VARS-215ENST00000375663 CCDC6Q16204 474 aa18.58■□□□□ 0.56
VARS-215ENST00000375663 SYCE1Q8N0S2 351 aa18.58■□□□□ 0.56
VARS-215ENST00000375663 CUEDC2Q9H467 287 aa18.58■□□□□ 0.56
VARS-215ENST00000375663 ATP8A2Q9NTI2 1148 aa18.58■□□□□ 0.56
VARS-215ENST00000375663 STK36Q9NRP7 1315 aa18.57■□□□□ 0.56
VARS-215ENST00000375663 GNA14O95837 355 aa18.57■□□□□ 0.56
VARS-215ENST00000375663 ENGASEQ8NFI3 743 aa18.57■□□□□ 0.56
VARS-215ENST00000375663 IRX2Q9BZI1 471 aaPredicted RBP18.57■□□□□ 0.56
VARS-215ENST00000375663 LY9Q9HBG7 655 aa18.57■□□□□ 0.56
VARS-215ENST00000375663 CTDNEP1O95476 244 aa18.57■□□□□ 0.56
VARS-215ENST00000375663 PLCB3Q01970 1234 aa18.57■□□□□ 0.56
VARS-215ENST00000375663 C2orf54Q08AI8 447 aa18.57■□□□□ 0.56
VARS-215ENST00000375663 PNMA8AQ86V59 439 aaPredicted RBP18.57■□□□□ 0.56
VARS-215ENST00000375663 OXER1Q8TDS5 423 aa18.57■□□□□ 0.56
VARS-215ENST00000375663 GLT8D2Q9H1C3 349 aa18.57■□□□□ 0.56
VARS-215ENST00000375663 MAGEF1Q9HAY2 307 aa18.57■□□□□ 0.56
VARS-215ENST00000375663 MRFAP1Q9Y605 127 aa18.57■□□□□ 0.56
VARS-215ENST00000375663 MTF1Q14872 753 aa18.57■□□□□ 0.56
VARS-215ENST00000375663 FAM26FQ5R3K3 315 aa18.57■□□□□ 0.56
VARS-215ENST00000375663 ATG9AQ7Z3C6 839 aa18.57■□□□□ 0.56
VARS-215ENST00000375663 CCDC170Q8IYT3 715 aa18.57■□□□□ 0.56
VARS-215ENST00000375663 CTTNBP2NLQ9P2B4 639 aa18.57■□□□□ 0.56
VARS-215ENST00000375663 PCDHA4Q9UN74 947 aa18.57■□□□□ 0.56
VARS-215ENST00000375663 SNAP23O00161 211 aa18.56■□□□□ 0.56
VARS-215ENST00000375663 EPHB4P54760 987 aa18.56■□□□□ 0.56
VARS-215ENST00000375663 PCDHB13Q9Y5F0 798 aa18.56■□□□□ 0.56
VARS-215ENST00000375663 PALLDQ8WX93 1383 aa18.56■□□□□ 0.56
VARS-215ENST00000375663 PLEKHA8P1O95397 391 aa18.56■□□□□ 0.56
VARS-215ENST00000375663 NAA25Q14CX7 972 aa18.56■□□□□ 0.56
VARS-215ENST00000375663 FNBP4Q8N3X1 1017 aaPredicted RBP18.56■□□□□ 0.56
VARS-215ENST00000375663 ABHD10Q9NUJ1 306 aa18.56■□□□□ 0.56
VARS-215ENST00000375663 NKIRAS1Q9NYS0 192 aa18.56■□□□□ 0.56
VARS-215ENST00000375663 PCDHA12Q9UN75 941 aa18.56■□□□□ 0.56
VARS-215ENST00000375663 JRKLQ9Y4A0 524 aa18.56■□□□□ 0.56
VARS-215ENST00000375663 ABCC12Q96J65 1359 aa18.56■□□□□ 0.56
VARS-215ENST00000375663 KRIT1O00522 736 aa18.56■□□□□ 0.56
VARS-215ENST00000375663 ATP2A1O14983 1001 aa18.56■□□□□ 0.56
VARS-215ENST00000375663 CHMP2AO43633 222 aa18.56■□□□□ 0.56
VARS-215ENST00000375663 CCNE1P24864 410 aa18.56■□□□□ 0.56
VARS-215ENST00000375663 FOXO4P98177 505 aa18.56■□□□□ 0.56
VARS-215ENST00000375663 ZNF622Q969S3 477 aaKnown RBP eCLIP18.56■□□□□ 0.568e-10■□□□□ 9.5
VARS-215ENST00000375663 NHEJ1Q9H9Q4 299 aaPredicted RBP18.56■□□□□ 0.56
VARS-215ENST00000375663 ARMCX3Q9UH62 379 aaPredicted RBP18.56■□□□□ 0.56
VARS-215ENST00000375663 CDC42BPGQ6DT37 1551 aa18.56■□□□□ 0.56
VARS-215ENST00000375663 FDPSP14324 419 aaKnown RBP18.55■□□□□ 0.56
VARS-215ENST00000375663 GPBP1Q86WP2 473 aa18.55■□□□□ 0.56
VARS-215ENST00000375663 CERS3Q8IU89 383 aa18.55■□□□□ 0.56
VARS-215ENST00000375663 UBL4BQ8N7F7 174 aa18.55■□□□□ 0.56
VARS-215ENST00000375663 RSRC1Q96IZ7 334 aaKnown RBP18.55■□□□□ 0.56
VARS-215ENST00000375663 ANKRD65E5RJM6 399 aa18.55■□□□□ 0.56
VARS-215ENST00000375663 GCNT3O95395 438 aa18.55■□□□□ 0.56
VARS-215ENST00000375663 XRCC5P13010 732 aaKnown RBP18.55■□□□□ 0.56
VARS-215ENST00000375663 SYNE4Q8N205 404 aa18.55■□□□□ 0.56
VARS-215ENST00000375663 U2AF1L4Q8WU68 220 aaKnown RBP18.55■□□□□ 0.56
VARS-215ENST00000375663 KRT12Q99456 494 aa18.55■□□□□ 0.56
VARS-215ENST00000375663 FAM170AA1A519 330 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms