RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 PLA2G6O60733 806 aa18.37■□□□□ 0.53
SDHB-201ENST00000375499 PDHBP11177 359 aa18.37■□□□□ 0.53
SDHB-201ENST00000375499 COPB2P35606 906 aa18.37■□□□□ 0.53
SDHB-201ENST00000375499 SLC16A2P36021 539 aa18.37■□□□□ 0.53
SDHB-201ENST00000375499 IKQ13123 557 aaPredicted RBP18.37■□□□□ 0.53
SDHB-201ENST00000375499 IMMTQ16891 758 aaKnown RBP18.37■□□□□ 0.53
SDHB-201ENST00000375499 ANO1Q5XXA6 986 aa18.37■□□□□ 0.53
SDHB-201ENST00000375499 FAM160B2Q86V87 743 aa18.37■□□□□ 0.53
SDHB-201ENST00000375499 DCAF4Q8WV16 495 aa18.37■□□□□ 0.53
SDHB-201ENST00000375499 ESR2Q92731 530 aa18.37■□□□□ 0.53
SDHB-201ENST00000375499 FGD4Q96M96 766 aa18.37■□□□□ 0.53
SDHB-201ENST00000375499 AGBL1Q96MI9 1066 aa18.37■□□□□ 0.53
SDHB-201ENST00000375499 PRR12Q9ULL5 1215 aa18.37■□□□□ 0.53
SDHB-201ENST00000375499 PFASO15067 1338 aa18.37■□□□□ 0.53
SDHB-201ENST00000375499 DNAJC25-GNG10A0A024R161 153 aa18.36■□□□□ 0.53
SDHB-201ENST00000375499 SGSM2O43147 1006 aa18.36■□□□□ 0.53
SDHB-201ENST00000375499 COL6A1P12109 1028 aa18.36■□□□□ 0.53
SDHB-201ENST00000375499 KCTD2Q14681 263 aa18.36■□□□□ 0.53
SDHB-201ENST00000375499 DNAH12Q6ZR08 3092 aa18.36■□□□□ 0.53
SDHB-201ENST00000375499 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.36■□□□□ 0.53
SDHB-201ENST00000375499 CHURC1Q8WUH1 139 aa18.36■□□□□ 0.53
SDHB-201ENST00000375499 HOMER2Q9NSB8 354 aa18.36■□□□□ 0.53
SDHB-201ENST00000375499 DDX20Q9UHI6 824 aaKnown RBP18.36■□□□□ 0.53
SDHB-201ENST00000375499 SNHG28P0DPA3 235 aa18.35■□□□□ 0.53
SDHB-201ENST00000375499 SYN1P17600 705 aa18.35■□□□□ 0.53
SDHB-201ENST00000375499 CNGA1P29973 690 aa18.35■□□□□ 0.53
SDHB-201ENST00000375499 OAZ1P54368 228 aa18.35■□□□□ 0.53
SDHB-201ENST00000375499 CCDC174Q6PII3 467 aa18.35■□□□□ 0.53
SDHB-201ENST00000375499 CENPQQ7L2Z9 268 aaPredicted RBP18.35■□□□□ 0.53
SDHB-201ENST00000375499 GPCPD1Q9NPB8 672 aa18.35■□□□□ 0.53
SDHB-201ENST00000375499 CTDP1Q9Y5B0 961 aaPredicted RBP18.35■□□□□ 0.53
SDHB-201ENST00000375499 POTEB2H3BUK9 544 aa18.34■□□□□ 0.53
SDHB-201ENST00000375499 CYP21A2P08686 494 aa18.34■□□□□ 0.53
SDHB-201ENST00000375499 BTNL9Q6UXG8 535 aa18.34■□□□□ 0.53
SDHB-201ENST00000375499 Q7L0L9 218 aa18.34■□□□□ 0.53
SDHB-201ENST00000375499 SLC5A4Q9NY91 659 aa18.34■□□□□ 0.53
SDHB-201ENST00000375499 ZSWIM5Q9P217 1185 aa18.34■□□□□ 0.53
SDHB-201ENST00000375499 CTNNA3Q9UI47 895 aa18.34■□□□□ 0.53
SDHB-201ENST00000375499 LRRC37A2A6NM11 1700 aa18.34■□□□□ 0.53
SDHB-201ENST00000375499 ZNF543Q08ER8 600 aa18.33■□□□□ 0.52
SDHB-201ENST00000375499 MUM1L1Q5H9M0 696 aa18.33■□□□□ 0.52
SDHB-201ENST00000375499 SYDE2Q5VT97 1194 aa18.33■□□□□ 0.52
SDHB-201ENST00000375499 STOX1Q6ZVD7 989 aa18.33■□□□□ 0.52
SDHB-201ENST00000375499 CYB5R4Q7L1T6 521 aa18.33■□□□□ 0.52
SDHB-201ENST00000375499 ENAHQ8N8S7 591 aaPredicted RBP18.33■□□□□ 0.52
SDHB-201ENST00000375499 CHST13Q8NET6 341 aa18.33■□□□□ 0.52
SDHB-201ENST00000375499 RUFY2Q8WXA3 655 aa18.33■□□□□ 0.52
SDHB-201ENST00000375499 TTC14Q96N46 770 aa18.33■□□□□ 0.52
SDHB-201ENST00000375499 TINF2Q9BSI4 451 aa18.33■□□□□ 0.52
SDHB-201ENST00000375499 RANBP17Q9H2T7 1088 aaKnown RBP18.33■□□□□ 0.52
SDHB-201ENST00000375499 CPVLQ9H3G5 476 aa18.33■□□□□ 0.52
SDHB-201ENST00000375499 RNF146Q9NTX7 359 aa18.33■□□□□ 0.52
SDHB-201ENST00000375499 DIS3Q9Y2L1 958 aaKnown RBP18.33■□□□□ 0.52
SDHB-201ENST00000375499 TNKSO95271 1327 aa18.32■□□□□ 0.52
SDHB-201ENST00000375499 SEPT4O43236 478 aa18.32■□□□□ 0.52
SDHB-201ENST00000375499 FDX1P10109 184 aa18.32■□□□□ 0.52
SDHB-201ENST00000375499 ALAS1P13196 640 aa18.32■□□□□ 0.52
SDHB-201ENST00000375499 DGKHQ86XP1 1220 aa18.32■□□□□ 0.52
SDHB-201ENST00000375499 LENG1Q96BZ8 264 aaPredicted RBP18.32■□□□□ 0.52
SDHB-201ENST00000375499 ZSCAN10Q96SZ4 725 aaPredicted RBP18.32■□□□□ 0.52
SDHB-201ENST00000375499 A1CFQ9NQ94 594 aaKnown RBP18.32■□□□□ 0.52
SDHB-201ENST00000375499 ASTN1O14525 1302 aa18.31■□□□□ 0.52
SDHB-201ENST00000375499 MSCO60682 206 aa18.31■□□□□ 0.52
SDHB-201ENST00000375499 SNAI1O95863 264 aaPredicted RBP18.31■□□□□ 0.52
SDHB-201ENST00000375499 ZNF865P0CJ78 1059 aaPredicted RBP18.31■□□□□ 0.52
SDHB-201ENST00000375499 GOLGA8HP0CJ92 632 aa18.31■□□□□ 0.52
SDHB-201ENST00000375499 CNTN2Q02246 1040 aa18.31■□□□□ 0.52
SDHB-201ENST00000375499 IQCA1Q86XH1 822 aa18.31■□□□□ 0.52
SDHB-201ENST00000375499 ANKRD35Q8N283 1001 aa18.31■□□□□ 0.52
SDHB-201ENST00000375499 PNMA1Q8ND90 353 aa18.31■□□□□ 0.52
SDHB-201ENST00000375499 ANKS1AQ92625 1134 aa18.31■□□□□ 0.52
SDHB-201ENST00000375499 DDX11Q96FC9 970 aa18.31■□□□□ 0.52
SDHB-201ENST00000375499 TRERF1Q96PN7 1200 aa18.31■□□□□ 0.52
SDHB-201ENST00000375499 LBHD1Q9BQE6 289 aaPredicted RBP18.31■□□□□ 0.52
SDHB-201ENST00000375499 KRT23Q9C075 422 aa18.31■□□□□ 0.52
SDHB-201ENST00000375499 ACAD9Q9H845 621 aa18.31■□□□□ 0.52
SDHB-201ENST00000375499 DDX49Q9Y6V7 483 aaKnown RBP18.31■□□□□ 0.52
SDHB-201ENST00000375499 ICAM1P05362 532 aa18.3■□□□□ 0.52
SDHB-201ENST00000375499 COL9A3Q14050 684 aaPredicted RBP18.3■□□□□ 0.52
SDHB-201ENST00000375499 SEC23AQ15436 765 aa18.3■□□□□ 0.52
SDHB-201ENST00000375499 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.3■□□□□ 0.52
SDHB-201ENST00000375499 COL25A1Q9BXS0 654 aaPredicted RBP18.3■□□□□ 0.52
SDHB-201ENST00000375499 FBXO40Q9UH90 709 aa18.3■□□□□ 0.52
SDHB-201ENST00000375499 CCPG1Q9ULG6 757 aa18.3■□□□□ 0.52
SDHB-201ENST00000375499 GJC2Q5T442 439 aaPredicted RBP18.29■□□□□ 0.52
SDHB-201ENST00000375499 MAMDC4Q6UXC1 1216 aa18.29■□□□□ 0.52
SDHB-201ENST00000375499 FAM133AQ8N9E0 248 aa18.29■□□□□ 0.52
SDHB-201ENST00000375499 MAP4K1Q92918 833 aa18.29■□□□□ 0.52
SDHB-201ENST00000375499 PURBQ96QR8 312 aaKnown RBP18.29■□□□□ 0.52
SDHB-201ENST00000375499 UBA5Q9GZZ9 404 aa18.29■□□□□ 0.52
SDHB-201ENST00000375499 LSG1Q9H089 658 aaKnown RBP18.29■□□□□ 0.52
SDHB-201ENST00000375499 CNNM2Q9H8M5 875 aa18.29■□□□□ 0.52
SDHB-201ENST00000375499 SENP2Q9HC62 589 aa18.29■□□□□ 0.52
SDHB-201ENST00000375499 RBM8AQ9Y5S9 174 aaKnown RBP18.29■□□□□ 0.52
SDHB-201ENST00000375499 U3KPZ7 1027 aaPredicted RBP18.29■□□□□ 0.52
SDHB-201ENST00000375499 SYNGAP1Q96PV0 1343 aa18.28■□□□□ 0.52
SDHB-201ENST00000375499 MYH6P13533 1939 aa18.28■□□□□ 0.52
SDHB-201ENST00000375499 SOWAHBA6NEL2 793 aa18.28■□□□□ 0.52
SDHB-201ENST00000375499 NFIBO00712 420 aa18.28■□□□□ 0.52
SDHB-201ENST00000375499 ADCY6O43306 1168 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms