RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 USP17L19D6RCP7 530 aa19.82■□□□□ 0.76
HLA-DMA-201ENST00000374843 USP17L20D6RJB6 530 aa19.82■□□□□ 0.76
HLA-DMA-201ENST00000374843 USP17L24Q0WX57 530 aa19.82■□□□□ 0.76
HLA-DMA-201ENST00000374843 TRAF1Q13077 416 aa19.82■□□□□ 0.76
HLA-DMA-201ENST00000374843 CATSPERGQ6ZRH7 1159 aa19.82■□□□□ 0.76
HLA-DMA-201ENST00000374843 TEX2Q8IWB9 1127 aa19.82■□□□□ 0.76
HLA-DMA-201ENST00000374843 TNFRSF25Q93038 417 aa19.82■□□□□ 0.76
HLA-DMA-201ENST00000374843 FLOT1O75955 427 aa19.81■□□□□ 0.76
HLA-DMA-201ENST00000374843 TOMM70O94826 608 aa19.81■□□□□ 0.76
HLA-DMA-201ENST00000374843 ZBTB48P10074 688 aaPredicted RBP19.81■□□□□ 0.76
HLA-DMA-201ENST00000374843 HOXA7P31268 230 aaPredicted RBP19.81■□□□□ 0.76
HLA-DMA-201ENST00000374843 KRT2P35908 639 aa19.81■□□□□ 0.76
HLA-DMA-201ENST00000374843 NAPAP54920 295 aa19.81■□□□□ 0.76
HLA-DMA-201ENST00000374843 SNAPC2Q13487 334 aa19.81■□□□□ 0.76
HLA-DMA-201ENST00000374843 KIFC2Q96AC6 838 aa19.81■□□□□ 0.76
HLA-DMA-201ENST00000374843 AMNQ9BXJ7 453 aa19.81■□□□□ 0.76
HLA-DMA-201ENST00000374843 SLC38A10Q9HBR0 1119 aa19.81■□□□□ 0.76
HLA-DMA-201ENST00000374843 BRMS1Q9HCU9 246 aa19.81■□□□□ 0.76
HLA-DMA-201ENST00000374843 PCDHA4Q9UN74 947 aa19.81■□□□□ 0.76
HLA-DMA-201ENST00000374843 ADAMTS5Q9UNA0 930 aa19.81■□□□□ 0.76
HLA-DMA-201ENST00000374843 M0R2N6 131 aa19.8■□□□□ 0.76
HLA-DMA-201ENST00000374843 BAG4O95429 457 aaKnown RBP19.8■□□□□ 0.76
HLA-DMA-201ENST00000374843 NLRP5P59047 1200 aa19.8■□□□□ 0.76
HLA-DMA-201ENST00000374843 TREML2Q5T2D2 321 aa19.8■□□□□ 0.76
HLA-DMA-201ENST00000374843 MCTP1Q6DN14 999 aa19.8■□□□□ 0.76
HLA-DMA-201ENST00000374843 FASTKD5Q7L8L6 764 aaKnown RBP19.8■□□□□ 0.76
HLA-DMA-201ENST00000374843 FBXO11Q86XK2 927 aa19.8■□□□□ 0.76
HLA-DMA-201ENST00000374843 NOSTRINQ8IVI9 506 aa19.8■□□□□ 0.76
HLA-DMA-201ENST00000374843 GBP4Q96PP9 640 aa19.8■□□□□ 0.76
HLA-DMA-201ENST00000374843 PNMA2Q9UL42 364 aa19.8■□□□□ 0.76
HLA-DMA-201ENST00000374843 AGTPBP1Q9UPW5 1226 aa19.8■□□□□ 0.76
HLA-DMA-201ENST00000374843 BTBD18B2RXH4 712 aa19.79■□□□□ 0.76
HLA-DMA-201ENST00000374843 DSG3P32926 999 aa19.79■□□□□ 0.76
HLA-DMA-201ENST00000374843 HUNKP57058 714 aa19.79■□□□□ 0.76
HLA-DMA-201ENST00000374843 FSTL1Q12841 308 aa19.79■□□□□ 0.76
HLA-DMA-201ENST00000374843 SPRYD7Q5W111 196 aa19.79■□□□□ 0.76
HLA-DMA-201ENST00000374843 REPS2Q8NFH8 660 aa19.79■□□□□ 0.76
HLA-DMA-201ENST00000374843 OXER1Q8TDS5 423 aa19.79■□□□□ 0.76
HLA-DMA-201ENST00000374843 C6orf50Q9HD87 102 aa19.79■□□□□ 0.76
HLA-DMA-201ENST00000374843 ZNF536O15090 1300 aa19.78■□□□□ 0.76
HLA-DMA-201ENST00000374843 VWA5AO00534 786 aa19.78■□□□□ 0.76
HLA-DMA-201ENST00000374843 ICAM1P05362 532 aa19.78■□□□□ 0.76
HLA-DMA-201ENST00000374843 GNA11P29992 359 aa19.78■□□□□ 0.76
HLA-DMA-201ENST00000374843 GTF2A2P52657 109 aa19.78■□□□□ 0.76
HLA-DMA-201ENST00000374843 OAZ1P54368 228 aa19.78■□□□□ 0.76
HLA-DMA-201ENST00000374843 COG2Q14746 738 aa19.78■□□□□ 0.76
HLA-DMA-201ENST00000374843 ATL3Q6DD88 541 aa19.78■□□□□ 0.76
HLA-DMA-201ENST00000374843 SAPCD2Q86UD0 394 aa19.78■□□□□ 0.76
HLA-DMA-201ENST00000374843 BLIDQ8IZY5 108 aa19.78■□□□□ 0.76
HLA-DMA-201ENST00000374843 BICD2Q8TD16 824 aa19.78■□□□□ 0.76
HLA-DMA-201ENST00000374843 COA7Q96BR5 231 aa19.78■□□□□ 0.76
HLA-DMA-201ENST00000374843 MS4A4AQ96JQ5 239 aa19.78■□□□□ 0.76
HLA-DMA-201ENST00000374843 GLT8D2Q9H1C3 349 aa19.78■□□□□ 0.76
HLA-DMA-201ENST00000374843 RIC8AQ9NPQ8 531 aa19.78■□□□□ 0.76
HLA-DMA-201ENST00000374843 PCDHA1Q9Y5I3 950 aa19.78■□□□□ 0.76
HLA-DMA-201ENST00000374843 ABCB11O95342 1321 aa19.77■□□□□ 0.76
HLA-DMA-201ENST00000374843 SPDYE16A6NNV3 312 aaPredicted RBP19.77■□□□□ 0.76
HLA-DMA-201ENST00000374843 ATP2A1O14983 1001 aa19.77■□□□□ 0.76
HLA-DMA-201ENST00000374843 ADCY7P51828 1080 aa19.77■□□□□ 0.76
HLA-DMA-201ENST00000374843 SNAP25P60880 206 aa19.77■□□□□ 0.76
HLA-DMA-201ENST00000374843 NR5A1Q13285 461 aa19.77■□□□□ 0.76
HLA-DMA-201ENST00000374843 MYSM1Q5VVJ2 828 aa19.77■□□□□ 0.76
HLA-DMA-201ENST00000374843 GPAT2Q6NUI2 795 aa19.77■□□□□ 0.76
HLA-DMA-201ENST00000374843 LBX2Q6XYB7 198 aa19.77■□□□□ 0.76
HLA-DMA-201ENST00000374843 GADL1Q6ZQY3 521 aa19.77■□□□□ 0.76
HLA-DMA-201ENST00000374843 RASAL3Q86YV0 1011 aa19.77■□□□□ 0.76
HLA-DMA-201ENST00000374843 ATG4CQ96DT6 458 aa19.77■□□□□ 0.76
HLA-DMA-201ENST00000374843 SLC45A1Q9Y2W3 748 aa19.77■□□□□ 0.76
HLA-DMA-201ENST00000374843 TLL2Q9Y6L7 1015 aa19.77■□□□□ 0.76
HLA-DMA-201ENST00000374843 RBBP6Q7Z6E9 1792 aaKnown RBP19.76■□□□□ 0.75
HLA-DMA-201ENST00000374843 SMCO2A6NFE2 343 aa19.76■□□□□ 0.75
HLA-DMA-201ENST00000374843 CETPP11597 493 aa19.76■□□□□ 0.75
HLA-DMA-201ENST00000374843 YY1P25490 414 aa19.76■□□□□ 0.75
HLA-DMA-201ENST00000374843 PABPC4Q13310 644 aaKnown RBP eCLIP19.76■□□□□ 0.75
HLA-DMA-201ENST00000374843 GNL2Q13823 731 aaKnown RBP19.76■□□□□ 0.75
HLA-DMA-201ENST00000374843 ZNF784Q8NCA9 323 aaPredicted RBP19.76■□□□□ 0.75
HLA-DMA-201ENST00000374843 HHIPL1Q96JK4 782 aa19.76■□□□□ 0.75
HLA-DMA-201ENST00000374843 ADAMTS3O15072 1205 aa19.75■□□□□ 0.75
HLA-DMA-201ENST00000374843 ZBED4O75132 1171 aa19.75■□□□□ 0.75
HLA-DMA-201ENST00000374843 DNM1Q05193 864 aaKnown RBP19.75■□□□□ 0.75
HLA-DMA-201ENST00000374843 FAM173BQ6P4H8 233 aa19.75■□□□□ 0.75
HLA-DMA-201ENST00000374843 CCDC174Q6PII3 467 aa19.75■□□□□ 0.75
HLA-DMA-201ENST00000374843 REXO1Q8N1G1 1221 aaKnown RBP19.75■□□□□ 0.75
HLA-DMA-201ENST00000374843 TMEM87AQ8NBN3 555 aa19.75■□□□□ 0.75
HLA-DMA-201ENST00000374843 CUL5Q93034 780 aa19.75■□□□□ 0.75
HLA-DMA-201ENST00000374843 HOXC10Q9NYD6 342 aa19.75■□□□□ 0.75
HLA-DMA-201ENST00000374843 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.75■□□□□ 0.75
HLA-DMA-201ENST00000374843 TESPA1A2RU30 521 aaPredicted RBP19.74■□□□□ 0.75
HLA-DMA-201ENST00000374843 OPLAHO14841 1288 aa19.74■□□□□ 0.75
HLA-DMA-201ENST00000374843 CLK2P49760 499 aaKnown RBP19.74■□□□□ 0.75
HLA-DMA-201ENST00000374843 KRT85P78386 507 aa19.74■□□□□ 0.75
HLA-DMA-201ENST00000374843 GHRHRQ02643 423 aa19.74■□□□□ 0.75
HLA-DMA-201ENST00000374843 MB21D1Q8N884 522 aa19.74■□□□□ 0.75
HLA-DMA-201ENST00000374843 CHAMP1Q96JM3 812 aa19.74■□□□□ 0.75
HLA-DMA-201ENST00000374843 ZNF396Q96N95 335 aaPredicted RBP19.74■□□□□ 0.75
HLA-DMA-201ENST00000374843 ZNF214Q9UL59 606 aaPredicted RBP19.74■□□□□ 0.75
HLA-DMA-201ENST00000374843 CCPG1Q9ULG6 757 aa19.74■□□□□ 0.75
HLA-DMA-201ENST00000374843 PCDHA6Q9UN73 950 aa19.74■□□□□ 0.75
HLA-DMA-201ENST00000374843 MRPL11Q9Y3B7 192 aaKnown RBP19.74■□□□□ 0.75
HLA-DMA-201ENST00000374843 PCDHA8Q9Y5H6 950 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms