RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 MYCP01106 439 aaPredicted RBP24.5■■□□□ 1.51
MAP1LC3A-202ENST00000374837 HOXC6P09630 235 aa24.5■■□□□ 1.51
MAP1LC3A-202ENST00000374837 LIFRP42702 1097 aa24.5■■□□□ 1.51
MAP1LC3A-202ENST00000374837 GRM4Q14833 912 aa24.5■■□□□ 1.51
MAP1LC3A-202ENST00000374837 CCL14Q16627 93 aa24.5■■□□□ 1.51
MAP1LC3A-202ENST00000374837 CATIPQ7Z7H3 387 aa24.5■■□□□ 1.51
MAP1LC3A-202ENST00000374837 DPP9Q86TI2 863 aa24.5■■□□□ 1.51
MAP1LC3A-202ENST00000374837 NPLOC4Q8TAT6 608 aa24.5■■□□□ 1.51
MAP1LC3A-202ENST00000374837 TRIB2Q92519 343 aa24.5■■□□□ 1.51
MAP1LC3A-202ENST00000374837 MAD2L2Q9UI95 211 aa24.5■■□□□ 1.51
MAP1LC3A-202ENST00000374837 INHAP05111 366 aa24.49■■□□□ 1.51
MAP1LC3A-202ENST00000374837 UBXN2AP68543 259 aa24.49■■□□□ 1.51
MAP1LC3A-202ENST00000374837 MTFR1Q15390 333 aa24.49■■□□□ 1.51
MAP1LC3A-202ENST00000374837 NFXL1Q6ZNB6 911 aa24.49■■□□□ 1.51
MAP1LC3A-202ENST00000374837 CHST13Q8NET6 341 aa24.49■■□□□ 1.51
MAP1LC3A-202ENST00000374837 TCEANC2Q96MN5 208 aa24.49■■□□□ 1.51
MAP1LC3A-202ENST00000374837 JAKMIP1Q96N16 626 aaKnown RBP24.49■■□□□ 1.51
MAP1LC3A-202ENST00000374837 WDR19Q8NEZ3 1342 aa24.49■■□□□ 1.51
MAP1LC3A-202ENST00000374837 DOCK3Q8IZD9 2030 aa24.49■■□□□ 1.51
MAP1LC3A-202ENST00000374837 CCDC69A6NI79 296 aa24.48■■□□□ 1.51
MAP1LC3A-202ENST00000374837 ICAM1P05362 532 aa24.48■■□□□ 1.51
MAP1LC3A-202ENST00000374837 HMGB1P09429 215 aaKnown RBP24.48■■□□□ 1.51
MAP1LC3A-202ENST00000374837 CPA1P15085 419 aa24.48■■□□□ 1.51
MAP1LC3A-202ENST00000374837 TRIM32Q13049 653 aa24.48■■□□□ 1.51
MAP1LC3A-202ENST00000374837 KCTD2Q14681 263 aa24.48■■□□□ 1.51
MAP1LC3A-202ENST00000374837 TKFCQ3LXA3 575 aa24.48■■□□□ 1.51
MAP1LC3A-202ENST00000374837 TRMT44Q8IYL2 757 aaKnown RBP24.48■■□□□ 1.51
MAP1LC3A-202ENST00000374837 ADGRF4Q8IZF3 695 aa24.48■■□□□ 1.51
MAP1LC3A-202ENST00000374837 ZNF654Q8IZM8 581 aa24.48■■□□□ 1.51
MAP1LC3A-202ENST00000374837 HOMER2Q9NSB8 354 aa24.48■■□□□ 1.51
MAP1LC3A-202ENST00000374837 FBXO40Q9UH90 709 aa24.48■■□□□ 1.51
MAP1LC3A-202ENST00000374837 CCPG1Q9ULG6 757 aa24.48■■□□□ 1.51
MAP1LC3A-202ENST00000374837 KLRF2D3W0D1 207 aa24.47■■□□□ 1.51
MAP1LC3A-202ENST00000374837 HMGCRP04035 888 aa24.47■■□□□ 1.51
MAP1LC3A-202ENST00000374837 PGK2P07205 417 aa24.47■■□□□ 1.51
MAP1LC3A-202ENST00000374837 ALAS1P13196 640 aa24.47■■□□□ 1.51
MAP1LC3A-202ENST00000374837 TAL1P17542 331 aaPredicted RBP24.47■■□□□ 1.51
MAP1LC3A-202ENST00000374837 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.47■■□□□ 1.51
MAP1LC3A-202ENST00000374837 NUP133Q8WUM0 1156 aa24.47■■□□□ 1.51
MAP1LC3A-202ENST00000374837 TRERF1Q96PN7 1200 aa24.47■■□□□ 1.51
MAP1LC3A-202ENST00000374837 MYL10Q9BUA6 226 aa24.47■■□□□ 1.51
MAP1LC3A-202ENST00000374837 VAT1LQ9HCJ6 419 aa24.47■■□□□ 1.51
MAP1LC3A-202ENST00000374837 RNF146Q9NTX7 359 aa24.47■■□□□ 1.51
MAP1LC3A-202ENST00000374837 FLRT1Q9NZU1 646 aa24.47■■□□□ 1.51
MAP1LC3A-202ENST00000374837 DDAH1O94760 285 aa24.46■■□□□ 1.51
MAP1LC3A-202ENST00000374837 SGMS1Q86VZ5 419 aa24.46■■□□□ 1.51
MAP1LC3A-202ENST00000374837 JMJD4Q9H9V9 463 aa24.46■■□□□ 1.51
MAP1LC3A-202ENST00000374837 SLC5A4Q9NY91 659 aa24.46■■□□□ 1.51
MAP1LC3A-202ENST00000374837 PLXNB2O15031 1838 aa24.46■■□□□ 1.51
MAP1LC3A-202ENST00000374837 COL11A1P12107 1806 aaPredicted RBP24.45■■□□□ 1.5
MAP1LC3A-202ENST00000374837 CCL5P13501 91 aa24.45■■□□□ 1.5
MAP1LC3A-202ENST00000374837 PSMA5P28066 241 aa24.45■■□□□ 1.5
MAP1LC3A-202ENST00000374837 SLC35G1Q2M3R5 365 aa24.45■■□□□ 1.5
MAP1LC3A-202ENST00000374837 BLOC1S2Q6QNY1 142 aa24.45■■□□□ 1.5
MAP1LC3A-202ENST00000374837 MAP3K14Q99558 947 aa24.45■■□□□ 1.5
MAP1LC3A-202ENST00000374837 ACAD9Q9H845 621 aa24.45■■□□□ 1.5
MAP1LC3A-202ENST00000374837 GTF3C3Q9Y5Q9 886 aa24.45■■□□□ 1.5
MAP1LC3A-202ENST00000374837 DHX16O60231 1041 aaKnown RBP24.44■■□□□ 1.5
MAP1LC3A-202ENST00000374837 SEC24BO95487 1268 aa24.44■■□□□ 1.5
MAP1LC3A-202ENST00000374837 CDC37Q16543 378 aaPredicted RBP24.44■■□□□ 1.5
MAP1LC3A-202ENST00000374837 ZNF792Q3KQV3 632 aa24.44■■□□□ 1.5
MAP1LC3A-202ENST00000374837 MUM1L1Q5H9M0 696 aa24.44■■□□□ 1.5
MAP1LC3A-202ENST00000374837 ANKRD35Q8N283 1001 aa24.44■■□□□ 1.5
MAP1LC3A-202ENST00000374837 DDX11Q96FC9 970 aa24.44■■□□□ 1.5
MAP1LC3A-202ENST00000374837 TMEM106CQ9BVX2 250 aa24.44■■□□□ 1.5
MAP1LC3A-202ENST00000374837 UNC93B1Q9H1C4 597 aa24.44■■□□□ 1.5
MAP1LC3A-202ENST00000374837 SLC12A7Q9Y666 1083 aa24.44■■□□□ 1.5
MAP1LC3A-202ENST00000374837 IGHA2P01877 340 aa24.43■■□□□ 1.5
MAP1LC3A-202ENST00000374837 RPS6KB1P23443 525 aa24.43■■□□□ 1.5
MAP1LC3A-202ENST00000374837 RNF208Q9H0X6 261 aa24.43■■□□□ 1.5
MAP1LC3A-202ENST00000374837 PNMA2Q9UL42 364 aa24.43■■□□□ 1.5
MAP1LC3A-202ENST00000374837 DNAJC25-GNG10A0A024R161 153 aa24.42■■□□□ 1.5
MAP1LC3A-202ENST00000374837 POTEFA5A3E0 1075 aa24.42■■□□□ 1.5
MAP1LC3A-202ENST00000374837 EIF5BO60841 1220 aaKnown RBP24.42■■□□□ 1.5
MAP1LC3A-202ENST00000374837 RXRAP19793 462 aa24.42■■□□□ 1.5
MAP1LC3A-202ENST00000374837 CASTP20810 708 aaKnown RBP24.42■■□□□ 1.5
MAP1LC3A-202ENST00000374837 CACNB2Q08289 660 aaPredicted RBP24.42■■□□□ 1.5
MAP1LC3A-202ENST00000374837 QRICH1Q2TAL8 776 aa24.42■■□□□ 1.5
MAP1LC3A-202ENST00000374837 MAP3K21Q5TCX8 1036 aa24.42■■□□□ 1.5
MAP1LC3A-202ENST00000374837 MFSD14CQ5VZR4 134 aa24.42■■□□□ 1.5
MAP1LC3A-202ENST00000374837 OLFML2BQ68BL8 750 aa24.42■■□□□ 1.5
MAP1LC3A-202ENST00000374837 RAB11FIP4Q86YS3 637 aa24.42■■□□□ 1.5
MAP1LC3A-202ENST00000374837 CTCFLQ8NI51 663 aaPredicted RBP24.42■■□□□ 1.5
MAP1LC3A-202ENST00000374837 MTMR8Q96EF0 704 aa24.42■■□□□ 1.5
MAP1LC3A-202ENST00000374837 MAML3Q96JK9 1138 aa24.42■■□□□ 1.5
MAP1LC3A-202ENST00000374837 RIOX1Q9H6W3 641 aa24.42■■□□□ 1.5
MAP1LC3A-202ENST00000374837 BRPF3Q9ULD4 1205 aa24.42■■□□□ 1.5
MAP1LC3A-202ENST00000374837 DIS3Q9Y2L1 958 aaKnown RBP24.42■■□□□ 1.5
MAP1LC3A-202ENST00000374837 CALM1P0DP23 149 aa24.41■■□□□ 1.5
MAP1LC3A-202ENST00000374837 CALM2P0DP24 149 aa24.41■■□□□ 1.5
MAP1LC3A-202ENST00000374837 CALM3P0DP25 149 aa24.41■■□□□ 1.5
MAP1LC3A-202ENST00000374837 PRKAR2AP13861 404 aaKnown RBP24.41■■□□□ 1.5
MAP1LC3A-202ENST00000374837 KIF5BP33176 963 aa24.41■■□□□ 1.5
MAP1LC3A-202ENST00000374837 C8orf34Q49A92 452 aa24.41■■□□□ 1.5
MAP1LC3A-202ENST00000374837 HABP4Q5JVS0 413 aaKnown RBP24.41■■□□□ 1.5
MAP1LC3A-202ENST00000374837 SYNE3Q6ZMZ3 975 aa24.41■■□□□ 1.5
MAP1LC3A-202ENST00000374837 Q6ZUG5 572 aa24.41■■□□□ 1.5
MAP1LC3A-202ENST00000374837 ZSWIM6Q9HCJ5 1215 aa24.41■■□□□ 1.5
MAP1LC3A-202ENST00000374837 A1CFQ9NQ94 594 aaKnown RBP24.41■■□□□ 1.5
MAP1LC3A-202ENST00000374837 HTTP42858 3142 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms