RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 ZNF512BQ96KM6 892 aaPredicted RBP11.37□□□□□ -0.59
HLA-DOA-202ENST00000374813 TEX13BQ9BXU2 312 aa11.37□□□□□ -0.59
HLA-DOA-202ENST00000374813 SWAP70Q9UH65 585 aa11.37□□□□□ -0.59
HLA-DOA-202ENST00000374813 PPP1R9AQ9ULJ8 1098 aa11.37□□□□□ -0.59
HLA-DOA-202ENST00000374813 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.37□□□□□ -0.59
HLA-DOA-202ENST00000374813 MYO15AQ9UKN7 3530 aa11.37□□□□□ -0.59
HLA-DOA-202ENST00000374813 IDH1O75874 414 aaKnown RBP11.36□□□□□ -0.59
HLA-DOA-202ENST00000374813 GNAI3P08754 354 aa11.36□□□□□ -0.59
HLA-DOA-202ENST00000374813 PTPN5P54829 565 aa11.36□□□□□ -0.59
HLA-DOA-202ENST00000374813 BEX3Q00994 111 aa11.36□□□□□ -0.59
HLA-DOA-202ENST00000374813 TNFAIP2Q03169 654 aa11.36□□□□□ -0.59
HLA-DOA-202ENST00000374813 ICA1Q05084 483 aa11.36□□□□□ -0.59
HLA-DOA-202ENST00000374813 PKN1Q16512 942 aa11.36□□□□□ -0.59
HLA-DOA-202ENST00000374813 FSCN1Q16658 493 aaKnown RBP11.36□□□□□ -0.59
HLA-DOA-202ENST00000374813 ALDH1L2Q3SY69 923 aa11.36□□□□□ -0.59
HLA-DOA-202ENST00000374813 CCDC184Q52MB2 194 aa11.36□□□□□ -0.59
HLA-DOA-202ENST00000374813 HFE2Q6ZVN8 426 aa11.36□□□□□ -0.59
HLA-DOA-202ENST00000374813 DEFB128Q7Z7B8 93 aa11.36□□□□□ -0.59
HLA-DOA-202ENST00000374813 VWCEQ96DN2 955 aa11.36□□□□□ -0.59
HLA-DOA-202ENST00000374813 AP5M1Q9H0R1 490 aa11.36□□□□□ -0.59
HLA-DOA-202ENST00000374813 GPR108Q9NPR9 543 aa11.36□□□□□ -0.59
HLA-DOA-202ENST00000374813 PRKAG3Q9UGI9 489 aa11.36□□□□□ -0.59
HLA-DOA-202ENST00000374813 PARP14Q460N5 1801 aa11.36□□□□□ -0.59
HLA-DOA-202ENST00000374813 MYO5AQ9Y4I1 1855 aaKnown RBP11.36□□□□□ -0.59
HLA-DOA-202ENST00000374813 MCM3APO60318 1980 aa11.36□□□□□ -0.59
HLA-DOA-202ENST00000374813 ADCY6O43306 1168 aa11.35□□□□□ -0.59
HLA-DOA-202ENST00000374813 BAIAP3O94812 1187 aa11.35□□□□□ -0.59
HLA-DOA-202ENST00000374813 IL9P15248 144 aa11.35□□□□□ -0.59
HLA-DOA-202ENST00000374813 ZAP70P43403 619 aa11.35□□□□□ -0.59
HLA-DOA-202ENST00000374813 SNRNP48Q6IEG0 339 aaKnown RBP11.35□□□□□ -0.59
HLA-DOA-202ENST00000374813 ARMCX2Q7L311 632 aa11.35□□□□□ -0.59
HLA-DOA-202ENST00000374813 SIAH1Q8IUQ4 282 aa11.35□□□□□ -0.59
HLA-DOA-202ENST00000374813 ANKRD35Q8N283 1001 aa11.35□□□□□ -0.59
HLA-DOA-202ENST00000374813 REPS2Q8NFH8 660 aa11.35□□□□□ -0.59
HLA-DOA-202ENST00000374813 CCDC17Q96LX7 622 aa11.35□□□□□ -0.59
HLA-DOA-202ENST00000374813 ALDH8A1Q9H2A2 487 aaPredicted RBP11.35□□□□□ -0.59
HLA-DOA-202ENST00000374813 GOPCQ9HD26 462 aa11.35□□□□□ -0.59
HLA-DOA-202ENST00000374813 FBXO28Q9NVF7 368 aa11.35□□□□□ -0.59
HLA-DOA-202ENST00000374813 MCM9Q9NXL9 1143 aa11.35□□□□□ -0.59
HLA-DOA-202ENST00000374813 FBXO40Q9UH90 709 aa11.35□□□□□ -0.59
HLA-DOA-202ENST00000374813 GRIN2DO15399 1336 aa11.35□□□□□ -0.59
HLA-DOA-202ENST00000374813 RIF1Q5UIP0 2472 aaKnown RBP11.34□□□□□ -0.59
HLA-DOA-202ENST00000374813 KCNJ6P48051 423 aa11.34□□□□□ -0.59
HLA-DOA-202ENST00000374813 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.34□□□□□ -0.59
HLA-DOA-202ENST00000374813 TLK2Q86UE8 772 aa11.34□□□□□ -0.59
HLA-DOA-202ENST00000374813 CCDC144CPQ8IYA2 1237 aa11.34□□□□□ -0.59
HLA-DOA-202ENST00000374813 RETREG2Q8NC44 543 aa11.34□□□□□ -0.59
HLA-DOA-202ENST00000374813 ZBED2Q9BTP6 218 aa11.34□□□□□ -0.59
HLA-DOA-202ENST00000374813 FTOQ9C0B1 505 aaKnown RBP eCLIP11.34□□□□□ -0.59
HLA-DOA-202ENST00000374813 PIH1D3Q9NQM4 214 aaKnown RBP11.34□□□□□ -0.59
HLA-DOA-202ENST00000374813 CTNNA3Q9UI47 895 aa11.34□□□□□ -0.59
HLA-DOA-202ENST00000374813 Q9Y3F1 56 aa11.34□□□□□ -0.59
HLA-DOA-202ENST00000374813 CACNA1HO95180 2353 aa11.34□□□□□ -0.59
HLA-DOA-202ENST00000374813 PITPNM1O00562 1244 aa11.33□□□□□ -0.6
HLA-DOA-202ENST00000374813 ATP2A1O14983 1001 aa11.33□□□□□ -0.6
HLA-DOA-202ENST00000374813 DYNC1LI2O43237 492 aaPredicted RBP11.33□□□□□ -0.6
HLA-DOA-202ENST00000374813 PRPF38AQ8NAV1 312 aaKnown RBP11.33□□□□□ -0.6
HLA-DOA-202ENST00000374813 NEK9Q8TD19 979 aa11.33□□□□□ -0.6
HLA-DOA-202ENST00000374813 GDPD5Q8WTR4 605 aa11.33□□□□□ -0.6
HLA-DOA-202ENST00000374813 PHOX2BQ99453 314 aa11.33□□□□□ -0.6
HLA-DOA-202ENST00000374813 MEIS3Q99687 375 aa11.33□□□□□ -0.6
HLA-DOA-202ENST00000374813 CRNKL1Q9BZJ0 848 aaKnown RBP11.33□□□□□ -0.6
HLA-DOA-202ENST00000374813 API5Q9BZZ5 524 aaKnown RBP11.33□□□□□ -0.6
HLA-DOA-202ENST00000374813 IRF2BPLQ9H1B7 796 aa11.33□□□□□ -0.6
HLA-DOA-202ENST00000374813 KANSL2Q9H9L4 492 aa11.33□□□□□ -0.6
HLA-DOA-202ENST00000374813 SUGCTQ9HAC7 445 aa11.33□□□□□ -0.6
HLA-DOA-202ENST00000374813 GNEQ9Y223 722 aaKnown RBP11.33□□□□□ -0.6
HLA-DOA-202ENST00000374813 CTDP1Q9Y5B0 961 aaPredicted RBP11.33□□□□□ -0.6
HLA-DOA-202ENST00000374813 TNKSO95271 1327 aa11.33□□□□□ -0.6
HLA-DOA-202ENST00000374813 DCHS1Q96JQ0 3298 aa11.33□□□□□ -0.6
HLA-DOA-202ENST00000374813 SCN5AQ14524 2016 aa11.32□□□□□ -0.6
HLA-DOA-202ENST00000374813 ASB14A6NK59 587 aa11.32□□□□□ -0.6
HLA-DOA-202ENST00000374813 RAD21O60216 631 aa11.32□□□□□ -0.6
HLA-DOA-202ENST00000374813 ZBED4O75132 1171 aa11.32□□□□□ -0.6
HLA-DOA-202ENST00000374813 ARHGEF15O94989 841 aa11.32□□□□□ -0.6
HLA-DOA-202ENST00000374813 TNNI3KQ59H18 835 aa11.32□□□□□ -0.6
HLA-DOA-202ENST00000374813 IQSEC1Q6DN90 963 aa11.32□□□□□ -0.6
HLA-DOA-202ENST00000374813 BMP8AQ7Z5Y6 402 aa11.32□□□□□ -0.6
HLA-DOA-202ENST00000374813 CHST13Q8NET6 341 aa11.32□□□□□ -0.6
HLA-DOA-202ENST00000374813 TGS1Q96RS0 853 aaKnown RBP11.32□□□□□ -0.6
HLA-DOA-202ENST00000374813 SLF1Q9BQI6 1058 aa11.32□□□□□ -0.6
HLA-DOA-202ENST00000374813 DBNDD2Q9BQY9 259 aa11.32□□□□□ -0.6
HLA-DOA-202ENST00000374813 KATNBL1Q9H079 304 aa11.32□□□□□ -0.6
HLA-DOA-202ENST00000374813 SMC4Q9NTJ3 1288 aa11.32□□□□□ -0.6
HLA-DOA-202ENST00000374813 RIPK3Q9Y572 518 aa11.32□□□□□ -0.6
HLA-DOA-202ENST00000374813 FPGT-TNNI3KV9GXZ4 949 aa11.32□□□□□ -0.6
HLA-DOA-202ENST00000374813 MYH8P13535 1937 aa11.32□□□□□ -0.6
HLA-DOA-202ENST00000374813 DMDP11532 3685 aa11.32□□□□□ -0.6
HLA-DOA-202ENST00000374813 ASTN1O14525 1302 aa11.32□□□□□ -0.6
HLA-DOA-202ENST00000374813 MAGEB6P1A0A0J9YX57 407 aa11.31□□□□□ -0.6
HLA-DOA-202ENST00000374813 C19orf67A6NJJ6 358 aa11.31□□□□□ -0.6
HLA-DOA-202ENST00000374813 GFRA3O60609 400 aa11.31□□□□□ -0.6
HLA-DOA-202ENST00000374813 IQCF3P0C7M6 154 aa11.31□□□□□ -0.6
HLA-DOA-202ENST00000374813 CYP2C9P11712 490 aa11.31□□□□□ -0.6
HLA-DOA-202ENST00000374813 EEF2P13639 858 aaKnown RBP11.31□□□□□ -0.6
HLA-DOA-202ENST00000374813 SLC4A3P48751 1232 aa11.31□□□□□ -0.6
HLA-DOA-202ENST00000374813 ERVK-21P61565 698 aa11.31□□□□□ -0.6
HLA-DOA-202ENST00000374813 PSMC6P62333 389 aa11.31□□□□□ -0.6
HLA-DOA-202ENST00000374813 ZP2Q05996 745 aa11.31□□□□□ -0.6
HLA-DOA-202ENST00000374813 BFSP2Q13515 415 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms