RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 SMYD1Q8NB12 490 aa8.86□□□□□ -0.99
USP48-203ENST00000374732 SELENOOQ9BVL4 669 aa8.86□□□□□ -0.99
USP48-203ENST00000374732 NGRNQ9NPE2 291 aaKnown RBP8.86□□□□□ -0.99
USP48-203ENST00000374732 CCDC61Q9Y6R9 512 aa8.86□□□□□ -0.99
USP48-203ENST00000374732 APAF1O14727 1248 aa8.86□□□□□ -0.99
USP48-203ENST00000374732 STAMBPO95630 424 aa8.86□□□□□ -0.99
USP48-203ENST00000374732 S100A5P33763 92 aa8.86□□□□□ -0.99
USP48-203ENST00000374732 TCF7P36402 384 aaPredicted RBP8.86□□□□□ -0.99
USP48-203ENST00000374732 FAPQ12884 760 aa8.86□□□□□ -0.99
USP48-203ENST00000374732 IL31Q6EBC2 164 aa8.86□□□□□ -0.99
USP48-203ENST00000374732 FAM173BQ6P4H8 233 aa8.86□□□□□ -0.99
USP48-203ENST00000374732 DGLUCYQ7Z3D6 616 aa8.86□□□□□ -0.99
USP48-203ENST00000374732 RNF168Q8IYW5 571 aaPredicted RBP8.86□□□□□ -0.99
USP48-203ENST00000374732 PPP1R9BQ96SB3 815 aa8.86□□□□□ -0.99
USP48-203ENST00000374732 RGL1Q9NZL6 768 aa8.86□□□□□ -0.99
USP48-203ENST00000374732 CARD8Q9Y2G2 431 aa8.86□□□□□ -0.99
USP48-203ENST00000374732 SLC4A4Q9Y6R1 1079 aa8.86□□□□□ -0.99
USP48-203ENST00000374732 PLEKHG2Q9H7P9 1386 aa8.86□□□□□ -0.99
USP48-203ENST00000374732 EPN2O95208 641 aa8.86□□□□□ -0.99
USP48-203ENST00000374732 BEND5Q7L4P6 421 aa8.86□□□□□ -0.99
USP48-203ENST00000374732 PNMA8AQ86V59 439 aaPredicted RBP8.86□□□□□ -0.99
USP48-203ENST00000374732 METTL16Q86W50 562 aaKnown RBP8.86□□□□□ -0.99
USP48-203ENST00000374732 CCDC144CPQ8IYA2 1237 aa8.86□□□□□ -0.99
USP48-203ENST00000374732 USP38Q8NB14 1042 aa8.86□□□□□ -0.99
USP48-203ENST00000374732 KIAA1524Q8TCG1 905 aa8.86□□□□□ -0.99
USP48-203ENST00000374732 SCG3Q8WXD2 468 aaKnown RBP8.86□□□□□ -0.99
USP48-203ENST00000374732 SAGE1Q9NXZ1 904 aa8.86□□□□□ -0.99
USP48-203ENST00000374732 SLAIN2Q9P270 581 aa8.86□□□□□ -0.99
USP48-203ENST00000374732 RGS17Q9UGC6 210 aaPredicted RBP8.86□□□□□ -0.99
USP48-203ENST00000374732 KPNA6O60684 536 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 NF2P35240 595 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 GABREP78334 506 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 NEDD9Q14511 834 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 SF3B3Q15393 1217 aaKnown RBP8.85□□□□□ -0.99
USP48-203ENST00000374732 CRY1Q16526 586 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 ALFQ53S48 1182 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 FBXO31Q5XUX0 539 aaPredicted RBP8.85□□□□□ -0.99
USP48-203ENST00000374732 PLBD1Q6P4A8 553 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 LVRNQ6Q4G3 990 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 LRRC31Q6UY01 552 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 CPXCR1Q8N123 301 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 SPDYE1Q8NFV5 336 aaPredicted RBP8.85□□□□□ -0.99
USP48-203ENST00000374732 RASSF8Q8NHQ8 419 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 CEP95Q96GE4 821 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 SEMA4AQ9H3S1 761 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 VCPKMTQ9H867 229 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 DBNDD1Q9H9R9 158 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 LAMP5Q9UJQ1 280 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 ATRNO75882 1429 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 ERC2O15083 957 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 GNRH1P01148 92 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 MTHFRP42898 656 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 PEX5P50542 639 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 NEK3P51956 506 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 TUBA1BP68363 451 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 THOC7Q6I9Y2 204 aaKnown RBP8.85□□□□□ -0.99
USP48-203ENST00000374732 POMZP3Q6PJE2 187 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 TUBA1AQ71U36 451 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 CENPQQ7L2Z9 268 aaPredicted RBP8.85□□□□□ -0.99
USP48-203ENST00000374732 GRAMD2AQ8IUY3 354 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 WDR63Q8IWG1 891 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 IFNL3Q8IZI9 196 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 TXLNBQ8N3L3 684 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 NAT8LQ8N9F0 302 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 LRRC45Q96CN5 670 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 DESI2Q9BSY9 194 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 SLKQ9H2G2 1235 aaPredicted RBP8.85□□□□□ -0.99
USP48-203ENST00000374732 ABCF3Q9NUQ8 709 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 CTNNA3Q9UI47 895 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 LRP6O75581 1613 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 CD163L1Q9NR16 1453 aa8.85□□□□□ -0.99
USP48-203ENST00000374732 H0YC42 278 aa8.84□□□□□ -0.99
USP48-203ENST00000374732 NDUFAB1O14561 156 aa8.84□□□□□ -0.99
USP48-203ENST00000374732 CTHP32929 405 aa8.84□□□□□ -0.99
USP48-203ENST00000374732 RILPL1Q5EBL4 403 aa8.84□□□□□ -0.99
USP48-203ENST00000374732 TRIM68Q6AZZ1 485 aa8.84□□□□□ -0.99
USP48-203ENST00000374732 MAELQ96JY0 434 aaKnown RBP8.84□□□□□ -0.99
USP48-203ENST00000374732 TSGA13Q96PP4 275 aa8.84□□□□□ -0.99
USP48-203ENST00000374732 UQCC2Q9BRT2 126 aa8.84□□□□□ -0.99
USP48-203ENST00000374732 TTPALQ9BTX7 342 aa8.84□□□□□ -0.99
USP48-203ENST00000374732 PARD6BQ9BYG5 372 aa8.84□□□□□ -0.99
USP48-203ENST00000374732 ZSWIM6Q9HCJ5 1215 aa8.84□□□□□ -0.99
USP48-203ENST00000374732 POLMQ9NP87 494 aaPredicted RBP8.84□□□□□ -0.99
USP48-203ENST00000374732 GPR108Q9NPR9 543 aa8.84□□□□□ -0.99
USP48-203ENST00000374732 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.84□□□□□ -0.99
USP48-203ENST00000374732 ZC3H7BQ9UGR2 993 aaKnown RBP8.84□□□□□ -0.99
USP48-203ENST00000374732 FBXO10Q9UK96 956 aa8.84□□□□□ -0.99
USP48-203ENST00000374732 FMN2Q9NZ56 1722 aa8.84□□□□□ -0.99
USP48-203ENST00000374732 A0A1W2PP64 1363 aa8.84□□□□□ -0.99
USP48-203ENST00000374732 PRPF3O43395 683 aaKnown RBP8.84□□□□□ -0.99
USP48-203ENST00000374732 RTN2O75298 545 aa8.84□□□□□ -0.99
USP48-203ENST00000374732 CD9P21926 228 aa8.84□□□□□ -0.99
USP48-203ENST00000374732 LTKP29376 864 aa8.84□□□□□ -0.99
USP48-203ENST00000374732 MDM2Q00987 491 aaPredicted RBP8.84□□□□□ -0.99
USP48-203ENST00000374732 ROR1Q01973 937 aa8.84□□□□□ -0.99
USP48-203ENST00000374732 SUZ12Q15022 739 aaKnown RBP8.84□□□□□ -0.99
USP48-203ENST00000374732 ASIC2Q16515 512 aa8.84□□□□□ -0.99
USP48-203ENST00000374732 BOLA3Q53S33 107 aa8.84□□□□□ -0.99
USP48-203ENST00000374732 DALRD3Q5D0E6 543 aaKnown RBP8.84□□□□□ -0.99
USP48-203ENST00000374732 HYIQ5T013 277 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms