RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 HSP90AA4PQ58FG1 418 aa15.74■□□□□ 0.11
HMGCL-203ENST00000374490 ZNF658Q5TYW1 1059 aaPredicted RBP15.74■□□□□ 0.11
HMGCL-203ENST00000374490 KLHL10Q6JEL2 608 aa15.74■□□□□ 0.11
HMGCL-203ENST00000374490 SLC51AQ86UW1 340 aa15.74■□□□□ 0.11
HMGCL-203ENST00000374490 KRT222Q8N1A0 295 aa15.74■□□□□ 0.11
HMGCL-203ENST00000374490 ZNF622Q969S3 477 aaKnown RBP eCLIP15.74■□□□□ 0.11
HMGCL-203ENST00000374490 MAGEF1Q9HAY2 307 aa15.74■□□□□ 0.11
HMGCL-203ENST00000374490 CTNND2Q9UQB3 1225 aa15.74■□□□□ 0.11
HMGCL-203ENST00000374490 ATP6V0A2Q9Y487 856 aa15.74■□□□□ 0.11
HMGCL-203ENST00000374490 SPDYE4A6NLX3 237 aa15.73■□□□□ 0.11
HMGCL-203ENST00000374490 MFAP3LO75121 409 aa15.73■□□□□ 0.11
HMGCL-203ENST00000374490 FECHP22830 423 aa15.73■□□□□ 0.11
HMGCL-203ENST00000374490 PRPHP41219 470 aa15.73■□□□□ 0.11
HMGCL-203ENST00000374490 ADKP55263 362 aaKnown RBP15.73■□□□□ 0.11
HMGCL-203ENST00000374490 GOLGA8FQ08AF8 430 aa15.73■□□□□ 0.11
HMGCL-203ENST00000374490 GOLGA8DPQ0D2H9 430 aa15.73■□□□□ 0.11
HMGCL-203ENST00000374490 TUBB2AQ13885 445 aa15.73■□□□□ 0.11
HMGCL-203ENST00000374490 RRAGBQ5VZM2 374 aa15.73■□□□□ 0.11
HMGCL-203ENST00000374490 ZNF444Q8N0Y2 327 aaPredicted RBP15.73■□□□□ 0.11
HMGCL-203ENST00000374490 C4orf32Q8N8J7 132 aa15.73■□□□□ 0.11
HMGCL-203ENST00000374490 CCDC12Q8WUD4 166 aaPredicted RBP15.73■□□□□ 0.11
HMGCL-203ENST00000374490 TUBB2BQ9BVA1 445 aa15.73■□□□□ 0.11
HMGCL-203ENST00000374490 CUEDC2Q9H467 287 aa15.73■□□□□ 0.11
HMGCL-203ENST00000374490 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.73■□□□□ 0.11
HMGCL-203ENST00000374490 V9GYY5 206 aaPredicted RBP15.73■□□□□ 0.11
HMGCL-203ENST00000374490 LRRC10BA6NIK2 292 aa15.72■□□□□ 0.11
HMGCL-203ENST00000374490 NFKBIEO00221 500 aa15.72■□□□□ 0.11
HMGCL-203ENST00000374490 RPN1P04843 607 aaKnown RBP15.72■□□□□ 0.11
HMGCL-203ENST00000374490 TSPY3P0CV98 308 aa15.72■□□□□ 0.11
HMGCL-203ENST00000374490 TSPY8P0CW00 308 aa15.72■□□□□ 0.11
HMGCL-203ENST00000374490 PLCG2P16885 1265 aa15.72■□□□□ 0.11
HMGCL-203ENST00000374490 STAT6P42226 847 aa15.72■□□□□ 0.11
HMGCL-203ENST00000374490 STX17P56962 302 aa15.72■□□□□ 0.11
HMGCL-203ENST00000374490 GNG11P61952 73 aa15.72■□□□□ 0.11
HMGCL-203ENST00000374490 KCNB1Q14721 858 aa15.72■□□□□ 0.11
HMGCL-203ENST00000374490 NOM1Q5C9Z4 860 aaKnown RBP15.72■□□□□ 0.11
HMGCL-203ENST00000374490 WWC2Q6AWC2 1192 aa15.72■□□□□ 0.11
HMGCL-203ENST00000374490 DTHD1Q6ZMT9 781 aa15.72■□□□□ 0.11
HMGCL-203ENST00000374490 TBC1D16Q8TBP0 767 aa15.72■□□□□ 0.11
HMGCL-203ENST00000374490 GPR101Q96P66 508 aaPredicted RBP15.72■□□□□ 0.11
HMGCL-203ENST00000374490 M0R2N6 131 aa15.72■□□□□ 0.11
HMGCL-203ENST00000374490 TADA3O75528 432 aa15.72■□□□□ 0.11
HMGCL-203ENST00000374490 ZSCAN20P17040 1043 aaPredicted RBP15.72■□□□□ 0.11
HMGCL-203ENST00000374490 SMARCA1P28370 1054 aa15.72■□□□□ 0.11
HMGCL-203ENST00000374490 ORC2Q13416 577 aaPredicted RBP15.72■□□□□ 0.11
HMGCL-203ENST00000374490 BMS1Q14692 1282 aaKnown RBP15.72■□□□□ 0.11
HMGCL-203ENST00000374490 ERCC6LQ2NKX8 1250 aa15.72■□□□□ 0.11
HMGCL-203ENST00000374490 DPY19L2Q6NUT2 758 aa15.72■□□□□ 0.11
HMGCL-203ENST00000374490 TOGARAM2Q6ZUX3 1019 aa15.72■□□□□ 0.11
HMGCL-203ENST00000374490 SLF2Q8IX21 1173 aa15.72■□□□□ 0.11
HMGCL-203ENST00000374490 SH3RF3Q8TEJ3 882 aaPredicted RBP15.72■□□□□ 0.11
HMGCL-203ENST00000374490 CCSER1Q9C0I3 900 aa15.72■□□□□ 0.11
HMGCL-203ENST00000374490 DISC1Q9NRI5 854 aa15.72■□□□□ 0.11
HMGCL-203ENST00000374490 IL17RBQ9NRM6 502 aa15.72■□□□□ 0.11
HMGCL-203ENST00000374490 FAM53CQ9NYF3 392 aa15.72■□□□□ 0.11
HMGCL-203ENST00000374490 MAD2L2Q9UI95 211 aa15.72■□□□□ 0.11
HMGCL-203ENST00000374490 H7C1D1 291 aa15.71■□□□□ 0.11
HMGCL-203ENST00000374490 TEX33O43247 280 aa15.71■□□□□ 0.11
HMGCL-203ENST00000374490 PRELPP51888 382 aa15.71■□□□□ 0.11
HMGCL-203ENST00000374490 FAM193AP78312 1265 aa15.71■□□□□ 0.11
HMGCL-203ENST00000374490 MAP3K9P80192 1104 aa15.71■□□□□ 0.11
HMGCL-203ENST00000374490 EVX2Q03828 476 aa15.71■□□□□ 0.11
HMGCL-203ENST00000374490 RBL2Q08999 1139 aa15.71■□□□□ 0.11
HMGCL-203ENST00000374490 STIM1Q13586 685 aa15.71■□□□□ 0.11
HMGCL-203ENST00000374490 IL17AQ16552 155 aa15.71■□□□□ 0.11
HMGCL-203ENST00000374490 ARHGAP29Q52LW3 1261 aa15.71■□□□□ 0.11
HMGCL-203ENST00000374490 STYK1Q6J9G0 422 aa15.71■□□□□ 0.11
HMGCL-203ENST00000374490 KRT25Q7Z3Z0 450 aa15.71■□□□□ 0.11
HMGCL-203ENST00000374490 NOC3LQ8WTT2 800 aaKnown RBP15.71■□□□□ 0.11
HMGCL-203ENST00000374490 CCDC47Q96A33 483 aaKnown RBP15.71■□□□□ 0.11
HMGCL-203ENST00000374490 AK8Q96MA6 479 aa15.71■□□□□ 0.11
HMGCL-203ENST00000374490 SPZ1Q9BXG8 430 aa15.71■□□□□ 0.11
HMGCL-203ENST00000374490 CD209Q9NNX6 404 aa15.71■□□□□ 0.11
HMGCL-203ENST00000374490 BARHL2Q9NY43 387 aa15.71■□□□□ 0.11
HMGCL-203ENST00000374490 POLLQ9UGP5 575 aa15.71■□□□□ 0.11
HMGCL-203ENST00000374490 JAG2Q9Y219 1238 aa15.71■□□□□ 0.11
HMGCL-203ENST00000374490 NAV1Q8NEY1 1877 aa15.7■□□□□ 0.1
HMGCL-203ENST00000374490 PALM3A6NDB9 673 aaPredicted RBP15.7■□□□□ 0.1
HMGCL-203ENST00000374490 ATP8B1O43520 1251 aa15.7■□□□□ 0.1
HMGCL-203ENST00000374490 C21orf2O43822 256 aa15.7■□□□□ 0.1
HMGCL-203ENST00000374490 PPP1R2P41236 205 aa15.7■□□□□ 0.1
HMGCL-203ENST00000374490 TUBB4BP68371 445 aa15.7■□□□□ 0.1
HMGCL-203ENST00000374490 KRT31Q15323 416 aa15.7■□□□□ 0.1
HMGCL-203ENST00000374490 TMTC1Q8IUR5 882 aa15.7■□□□□ 0.1
HMGCL-203ENST00000374490 NELFBQ8WX92 580 aa15.7■□□□□ 0.1
HMGCL-203ENST00000374490 ZNF219Q9P2Y4 722 aaPredicted RBP15.7■□□□□ 0.1
HMGCL-203ENST00000374490 PCDHA6Q9UN73 950 aa15.7■□□□□ 0.1
HMGCL-203ENST00000374490 TTF2Q9UNY4 1162 aaKnown RBP15.7■□□□□ 0.1
HMGCL-203ENST00000374490 PCDHA8Q9Y5H6 950 aa15.7■□□□□ 0.1
HMGCL-203ENST00000374490 MRFAP1Q9Y605 127 aa15.7■□□□□ 0.1
HMGCL-203ENST00000374490 ADGRG1Q9Y653 693 aa15.7■□□□□ 0.1
HMGCL-203ENST00000374490 FAM205AQ6ZU69 1335 aa15.7■□□□□ 0.1
HMGCL-203ENST00000374490 STXBP3O00186 592 aa15.69■□□□□ 0.1
HMGCL-203ENST00000374490 N4BP3O15049 544 aa15.69■□□□□ 0.1
HMGCL-203ENST00000374490 IL1R1P14778 569 aa15.69■□□□□ 0.1
HMGCL-203ENST00000374490 CASP1P29466 404 aa15.69■□□□□ 0.1
HMGCL-203ENST00000374490 COPB1P53618 953 aaKnown RBP15.69■□□□□ 0.1
HMGCL-203ENST00000374490 PTPN21Q16825 1174 aa15.69■□□□□ 0.1
HMGCL-203ENST00000374490 DPP8Q6V1X1 898 aaPredicted RBP15.69■□□□□ 0.1
HMGCL-203ENST00000374490 CREBRFQ8IUR6 639 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms