RNA–Protein interactions for RNA: ENST00000373995.7

A1CF-203, Transcript of APOBEC1 complementation factor, humanhuman

TSL 2 BASIC

Gene A1CF, Length 2,211 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-203ENST00000373995 CALM2P0DP24 149 aa14.31□□□□□ -0.12
A1CF-203ENST00000373995 CALM3P0DP25 149 aa14.31□□□□□ -0.12
A1CF-203ENST00000373995 BMP3P12645 472 aa14.31□□□□□ -0.12
A1CF-203ENST00000373995 RXRAP19793 462 aa14.31□□□□□ -0.12
A1CF-203ENST00000373995 GRM1Q13255 1194 aa14.31□□□□□ -0.12
A1CF-203ENST00000373995 GPATCH4Q5T3I0 446 aaKnown RBP14.31□□□□□ -0.12
A1CF-203ENST00000373995 GADL1Q6ZQY3 521 aa14.31□□□□□ -0.12
A1CF-203ENST00000373995 MICU3Q86XE3 530 aa14.31□□□□□ -0.12
A1CF-203ENST00000373995 RPAP3Q9H6T3 665 aaPredicted RBP14.31□□□□□ -0.12
A1CF-203ENST00000373995 SLC45A1Q9Y2W3 748 aa14.31□□□□□ -0.12
A1CF-203ENST00000373995 GOLGA8BA8MQT2 603 aa14.3□□□□□ -0.12
A1CF-203ENST00000373995 BTBD19C9JJ37 291 aa14.3□□□□□ -0.12
A1CF-203ENST00000373995 IGF2BP3O00425 579 aaKnown RBP eCLIP14.3□□□□□ -0.12
A1CF-203ENST00000373995 PLA2G6O60733 806 aa14.3□□□□□ -0.12
A1CF-203ENST00000373995 COQ9O75208 318 aa14.3□□□□□ -0.12
A1CF-203ENST00000373995 MAP2K2P36507 400 aa14.3□□□□□ -0.12
A1CF-203ENST00000373995 SREBF2Q12772 1141 aa14.3□□□□□ -0.12
A1CF-203ENST00000373995 ASPRV1Q53RT3 343 aa14.3□□□□□ -0.12
A1CF-203ENST00000373995 SYNE3Q6ZMZ3 975 aa14.3□□□□□ -0.12
A1CF-203ENST00000373995 CATSPERGQ6ZRH7 1159 aa14.3□□□□□ -0.12
A1CF-203ENST00000373995 KCTD1Q719H9 257 aa14.3□□□□□ -0.12
A1CF-203ENST00000373995 FANCBQ8NB91 859 aa14.3□□□□□ -0.12
A1CF-203ENST00000373995 NUP133Q8WUM0 1156 aa14.3□□□□□ -0.12
A1CF-203ENST00000373995 FAM217BQ9NTX9 383 aaPredicted RBP14.3□□□□□ -0.12
A1CF-203ENST00000373995 LIMCH1Q9UPQ0 1083 aa14.3□□□□□ -0.12
A1CF-203ENST00000373995 PARP1P09874 1014 aaKnown RBP14.3□□□□□ -0.12
A1CF-203ENST00000373995 ME3Q16798 604 aa14.3□□□□□ -0.12
A1CF-203ENST00000373995 RAB11FIP4Q86YS3 637 aa14.3□□□□□ -0.12
A1CF-203ENST00000373995 REM2Q8IYK8 340 aaPredicted RBP14.3□□□□□ -0.12
A1CF-203ENST00000373995 STAG2Q8N3U4 1231 aa14.3□□□□□ -0.12
A1CF-203ENST00000373995 ATL2Q8NHH9 583 aa14.3□□□□□ -0.12
A1CF-203ENST00000373995 CCDC97Q96F63 343 aaPredicted RBP14.3□□□□□ -0.12
A1CF-203ENST00000373995 ZCCHC17Q9NP64 241 aaKnown RBP14.3□□□□□ -0.12
A1CF-203ENST00000373995 DONSONQ9NYP3 566 aa14.3□□□□□ -0.12
A1CF-203ENST00000373995 RLFQ13129 1914 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 USP17L15C9J2P7 530 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 USP17L13C9JLJ4 530 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 USP17L11C9JVI0 530 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 USP17L18D6R9N7 530 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 USP17L22D6RA61 530 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 USP17L17D6RBQ6 530 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 USP17L19D6RCP7 530 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 USP17L20D6RJB6 530 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 MARCH6O60337 910 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 GOLGA8HP0CJ92 632 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 USP17L24Q0WX57 530 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 PPP2R5BQ15173 497 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 BTNL9Q6UXG8 535 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 IFNL1Q8IU54 200 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 PPME1Q9Y570 386 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 FRMPD2Q68DX3 1309 aaPredicted RBP14.29□□□□□ -0.12
A1CF-203ENST00000373995 TMEM232C9JQI7 657 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 PDHXO00330 501 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 LARGE1O95461 756 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 CAPN2P17655 700 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 CDC27P30260 824 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 KIF5BP33176 963 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 MCM2P49736 904 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 METAP2P50579 478 aaKnown RBP eCLIP14.29□□□□□ -0.12
A1CF-203ENST00000373995 STAT2P52630 851 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 SLC35G1Q2M3R5 365 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 TTBK2Q6IQ55 1244 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 DNAJC5GQ8N7S2 189 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 CTCFLQ8NI51 663 aaPredicted RBP14.29□□□□□ -0.12
A1CF-203ENST00000373995 TANGO6Q9C0B7 1094 aa14.29□□□□□ -0.12
A1CF-203ENST00000373995 MYPNQ86TC9 1320 aa14.28□□□□□ -0.12
A1CF-203ENST00000373995 PARP14Q460N5 1801 aa14.28□□□□□ -0.12
A1CF-203ENST00000373995 GOLGA8AA7E2F4 631 aa14.28□□□□□ -0.12
A1CF-203ENST00000373995 KLRF2D3W0D1 207 aa14.28□□□□□ -0.12
A1CF-203ENST00000373995 PFKFB2O60825 505 aa14.28□□□□□ -0.12
A1CF-203ENST00000373995 PABPC4Q13310 644 aaKnown RBP eCLIP14.28□□□□□ -0.12
A1CF-203ENST00000373995 CCDC144CPQ8IYA2 1237 aa14.28□□□□□ -0.12
A1CF-203ENST00000373995 CXorf38Q8TB03 319 aa14.28□□□□□ -0.12
A1CF-203ENST00000373995 SNX21Q969T3 373 aa14.28□□□□□ -0.12
A1CF-203ENST00000373995 ASCC2Q9H1I8 757 aaPredicted RBP14.28□□□□□ -0.12
A1CF-203ENST00000373995 FBXO28Q9NVF7 368 aa14.28□□□□□ -0.12
A1CF-203ENST00000373995 FEM1BQ9UK73 627 aa14.28□□□□□ -0.12
A1CF-203ENST00000373995 SMC3Q9UQE7 1217 aa14.28□□□□□ -0.12
A1CF-203ENST00000373995 FLOT1O75955 427 aa14.27□□□□□ -0.12
A1CF-203ENST00000373995 FUT2Q10981 343 aa14.27□□□□□ -0.12
A1CF-203ENST00000373995 RTN1Q16799 776 aa14.27□□□□□ -0.12
A1CF-203ENST00000373995 C1QTNF12Q5T7M4 302 aa14.27□□□□□ -0.12
A1CF-203ENST00000373995 POTEEQ6S8J3 1075 aa14.27□□□□□ -0.12
A1CF-203ENST00000373995 LBX2Q6XYB7 198 aa14.27□□□□□ -0.12
A1CF-203ENST00000373995 TMTC3Q6ZXV5 915 aa14.27□□□□□ -0.12
A1CF-203ENST00000373995 GPCPD1Q9NPB8 672 aa14.27□□□□□ -0.12
A1CF-203ENST00000373995 PPP1R9AQ9ULJ8 1098 aa14.27□□□□□ -0.12
A1CF-203ENST00000373995 ADAMTS5Q9UNA0 930 aa14.27□□□□□ -0.12
A1CF-203ENST00000373995 CYTH3O43739 400 aa14.27□□□□□ -0.13
A1CF-203ENST00000373995 SMARCA1P28370 1054 aa14.27□□□□□ -0.13
A1CF-203ENST00000373995 ST3GAL1Q11201 340 aa14.27□□□□□ -0.13
A1CF-203ENST00000373995 SCRN1Q12765 414 aa14.27□□□□□ -0.13
A1CF-203ENST00000373995 COG2Q14746 738 aa14.27□□□□□ -0.13
A1CF-203ENST00000373995 NTRK3Q16288 839 aa14.27□□□□□ -0.13
A1CF-203ENST00000373995 GET4Q7L5D6 327 aaPredicted RBP14.27□□□□□ -0.13
A1CF-203ENST00000373995 FAM160B2Q86V87 743 aa14.27□□□□□ -0.13
A1CF-203ENST00000373995 CHURC1Q8WUH1 139 aa14.27□□□□□ -0.13
A1CF-203ENST00000373995 GTF3C6Q969F1 213 aa14.27□□□□□ -0.13
A1CF-203ENST00000373995 ZBTB9Q96C00 473 aa14.27□□□□□ -0.13
A1CF-203ENST00000373995 SLF1Q9BQI6 1058 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms