RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 PRDM10Q9NQV6 1147 aa21.56■■□□□ 1.04
CDX4-201ENST00000373514 TNPO2O14787 897 aaKnown RBP21.55■■□□□ 1.04
CDX4-201ENST00000373514 CYTH3O43739 400 aa21.55■■□□□ 1.04
CDX4-201ENST00000373514 FMNL1O95466 1100 aaPredicted RBP21.55■■□□□ 1.04
CDX4-201ENST00000373514 CALM1P0DP23 149 aa21.55■■□□□ 1.04
CDX4-201ENST00000373514 CALM2P0DP24 149 aa21.55■■□□□ 1.04
CDX4-201ENST00000373514 CALM3P0DP25 149 aa21.55■■□□□ 1.04
CDX4-201ENST00000373514 ERCC3P19447 782 aa21.55■■□□□ 1.04
CDX4-201ENST00000373514 NEK4P51957 841 aa21.55■■□□□ 1.04
CDX4-201ENST00000373514 FCGRTP55899 365 aa21.55■■□□□ 1.04
CDX4-201ENST00000373514 SYNE3Q6ZMZ3 975 aa21.55■■□□□ 1.04
CDX4-201ENST00000373514 NCAPG2Q86XI2 1143 aa21.55■■□□□ 1.04
CDX4-201ENST00000373514 FANCBQ8NB91 859 aa21.55■■□□□ 1.04
CDX4-201ENST00000373514 JMJD4Q9H9V9 463 aa21.55■■□□□ 1.04
CDX4-201ENST00000373514 TRIM17Q9Y577 477 aa21.55■■□□□ 1.04
CDX4-201ENST00000373514 CDC27P30260 824 aa21.55■■□□□ 1.04
CDX4-201ENST00000373514 STAT3P40763 770 aa21.55■■□□□ 1.04
CDX4-201ENST00000373514 RABEP1Q15276 862 aa21.55■■□□□ 1.04
CDX4-201ENST00000373514 OTOP1Q7RTM1 612 aa21.55■■□□□ 1.04
CDX4-201ENST00000373514 GPR142Q7Z601 462 aa21.55■■□□□ 1.04
CDX4-201ENST00000373514 RIOX2Q8IUF8 465 aa21.55■■□□□ 1.04
CDX4-201ENST00000373514 PIBF1Q8WXW3 757 aa21.55■■□□□ 1.04
CDX4-201ENST00000373514 MAP3K14Q99558 947 aa21.55■■□□□ 1.04
CDX4-201ENST00000373514 TEX13BQ9BXU2 312 aa21.55■■□□□ 1.04
CDX4-201ENST00000373514 HOMER2Q9NSB8 354 aa21.55■■□□□ 1.04
CDX4-201ENST00000373514 NID2Q14112 1375 aa21.54■■□□□ 1.04
CDX4-201ENST00000373514 ATP2A1O14983 1001 aa21.54■■□□□ 1.04
CDX4-201ENST00000373514 KIF5BP33176 963 aa21.54■■□□□ 1.04
CDX4-201ENST00000373514 CCNA1P78396 465 aa21.54■■□□□ 1.04
CDX4-201ENST00000373514 RTN1Q16799 776 aa21.54■■□□□ 1.04
CDX4-201ENST00000373514 TMTC3Q6ZXV5 915 aa21.54■■□□□ 1.04
CDX4-201ENST00000373514 FAM217BQ9NTX9 383 aaPredicted RBP21.54■■□□□ 1.04
CDX4-201ENST00000373514 GABRQQ9UN88 632 aa21.54■■□□□ 1.04
CDX4-201ENST00000373514 CNTNAP5Q8WYK1 1306 aa21.53■■□□□ 1.04
CDX4-201ENST00000373514 METAP2P50579 478 aaKnown RBP eCLIP21.53■■□□□ 1.04
CDX4-201ENST00000373514 STK3Q13188 491 aa21.53■■□□□ 1.04
CDX4-201ENST00000373514 QRICH1Q2TAL8 776 aa21.53■■□□□ 1.04
CDX4-201ENST00000373514 HOMER1Q86YM7 354 aa21.53■■□□□ 1.04
CDX4-201ENST00000373514 CCAR1Q8IX12 1150 aaKnown RBP21.53■■□□□ 1.04
CDX4-201ENST00000373514 CCDC82Q8N4S0 544 aa21.53■■□□□ 1.04
CDX4-201ENST00000373514 SRBD1Q8N5C6 995 aaKnown RBP21.53■■□□□ 1.04
CDX4-201ENST00000373514 PIGSQ96S52 555 aa21.53■■□□□ 1.04
CDX4-201ENST00000373514 CCPG1Q9ULG6 757 aa21.53■■□□□ 1.04
CDX4-201ENST00000373514 TPCN1Q9ULQ1 816 aa21.53■■□□□ 1.04
CDX4-201ENST00000373514 LARGE1O95461 756 aa21.52■■□□□ 1.04
CDX4-201ENST00000373514 ICAM1P05362 532 aa21.52■■□□□ 1.04
CDX4-201ENST00000373514 FDX1P10109 184 aa21.52■■□□□ 1.04
CDX4-201ENST00000373514 PDIA3P30101 505 aaKnown RBP21.52■■□□□ 1.04
CDX4-201ENST00000373514 MAPK4P31152 587 aa21.52■■□□□ 1.04
CDX4-201ENST00000373514 OAZ1P54368 228 aa21.52■■□□□ 1.04
CDX4-201ENST00000373514 EVCP57679 992 aa21.52■■□□□ 1.04
CDX4-201ENST00000373514 CCT2P78371 535 aaKnown RBP21.52■■□□□ 1.04
CDX4-201ENST00000373514 PRKCZQ05513 592 aa21.52■■□□□ 1.04
CDX4-201ENST00000373514 USH1GQ495M9 461 aa21.52■■□□□ 1.04
CDX4-201ENST00000373514 CTU1Q7Z7A3 348 aaKnown RBP21.52■■□□□ 1.04
CDX4-201ENST00000373514 SHCBP1Q8NEM2 672 aa21.52■■□□□ 1.04
CDX4-201ENST00000373514 RIOX1Q9H6W3 641 aa21.52■■□□□ 1.04
CDX4-201ENST00000373514 NCOA5Q9HCD5 579 aaKnown RBP21.52■■□□□ 1.04
CDX4-201ENST00000373514 CWC22Q9HCG8 908 aaKnown RBP21.52■■□□□ 1.04
CDX4-201ENST00000373514 PPP1R11O60927 126 aaPredicted RBP21.51■■□□□ 1.03
CDX4-201ENST00000373514 ALAS1P13196 640 aa21.51■■□□□ 1.03
CDX4-201ENST00000373514 BECN1Q14457 450 aa21.51■■□□□ 1.03
CDX4-201ENST00000373514 PLEKHH3Q7Z736 793 aa21.51■■□□□ 1.03
CDX4-201ENST00000373514 MTMR8Q96EF0 704 aa21.51■■□□□ 1.03
CDX4-201ENST00000373514 ALDH8A1Q9H2A2 487 aaPredicted RBP21.51■■□□□ 1.03
CDX4-201ENST00000373514 hCG_1642624A0A1W2PR95 340 aa21.5■■□□□ 1.03
CDX4-201ENST00000373514 RCAN1P53805 252 aa21.5■■□□□ 1.03
CDX4-201ENST00000373514 MUM1L1Q5H9M0 696 aa21.5■■□□□ 1.03
CDX4-201ENST00000373514 SPZ1Q9BXG8 430 aa21.5■■□□□ 1.03
CDX4-201ENST00000373514 RNF146Q9NTX7 359 aa21.5■■□□□ 1.03
CDX4-201ENST00000373514 RBM28Q9NW13 759 aaKnown RBP21.5■■□□□ 1.03
CDX4-201ENST00000373514 MCM3APO60318 1980 aa21.5■■□□□ 1.03
CDX4-201ENST00000373514 PPFIA3O75145 1194 aa21.5■■□□□ 1.03
CDX4-201ENST00000373514 SLC25A27O95847 323 aa21.5■■□□□ 1.03
CDX4-201ENST00000373514 ADD1P35611 737 aaKnown RBP21.5■■□□□ 1.03
CDX4-201ENST00000373514 COL13A1Q5TAT6 717 aaPredicted RBP21.5■■□□□ 1.03
CDX4-201ENST00000373514 COA7Q96BR5 231 aa21.5■■□□□ 1.03
CDX4-201ENST00000373514 SRRDQ9UH36 339 aa21.5■■□□□ 1.03
CDX4-201ENST00000373514 HTTP42858 3142 aa21.49■■□□□ 1.03
CDX4-201ENST00000373514 LRRC37A2A6NM11 1700 aa21.49■■□□□ 1.03
CDX4-201ENST00000373514 ZBTB5O15062 677 aa21.49■■□□□ 1.03
CDX4-201ENST00000373514 GNAQP50148 359 aa21.49■■□□□ 1.03
CDX4-201ENST00000373514 SNX21Q969T3 373 aa21.49■■□□□ 1.03
CDX4-201ENST00000373514 MROH8Q9H579 483 aa21.49■■□□□ 1.03
CDX4-201ENST00000373514 PTCH2Q9Y6C5 1203 aa21.49■■□□□ 1.03
CDX4-201ENST00000373514 DTNBO60941 627 aa21.48■■□□□ 1.03
CDX4-201ENST00000373514 PTPREP23469 700 aa21.48■■□□□ 1.03
CDX4-201ENST00000373514 FLT3LGP49771 235 aa21.48■■□□□ 1.03
CDX4-201ENST00000373514 FUT2Q10981 343 aa21.48■■□□□ 1.03
CDX4-201ENST00000373514 MORN1Q5T089 497 aa21.48■■□□□ 1.03
CDX4-201ENST00000373514 TRERF1Q96PN7 1200 aa21.48■■□□□ 1.03
CDX4-201ENST00000373514 GJD2Q9UKL4 321 aa21.48■■□□□ 1.03
CDX4-201ENST00000373514 IVNS1ABPQ9Y6Y0 642 aa21.48■■□□□ 1.03
CDX4-201ENST00000373514 NFIBO00712 420 aa21.47■■□□□ 1.03
CDX4-201ENST00000373514 CD2BP2O95400 341 aaKnown RBP21.47■■□□□ 1.03
CDX4-201ENST00000373514 GRB14Q14449 540 aa21.47■■□□□ 1.03
CDX4-201ENST00000373514 FBXO11Q86XK2 927 aa21.47■■□□□ 1.03
CDX4-201ENST00000373514 ZNF274Q96GC6 653 aaPredicted RBP21.47■■□□□ 1.03
CDX4-201ENST00000373514 MMP19Q99542 508 aa21.47■■□□□ 1.03
CDX4-201ENST00000373514 LZTS2Q9BRK4 669 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms