RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 TBC1D9BQ66K14 1250 aa7.28□□□□□ -1.24
CHD6-203ENST00000373233 CCDC82Q8N4S0 544 aa7.28□□□□□ -1.24
CHD6-203ENST00000373233 SPAG5Q96R06 1193 aa7.28□□□□□ -1.24
CHD6-203ENST00000373233 OSBPL1AQ9BXW6 950 aa7.28□□□□□ -1.24
CHD6-203ENST00000373233 RXRBP28702 533 aa7.28□□□□□ -1.24
CHD6-203ENST00000373233 CTDSPL2Q05D32 466 aa7.28□□□□□ -1.24
CHD6-203ENST00000373233 TRIM28Q13263 835 aaKnown RBP7.28□□□□□ -1.24
CHD6-203ENST00000373233 ATG9AQ7Z3C6 839 aa7.28□□□□□ -1.24
CHD6-203ENST00000373233 MYO1EQ12965 1108 aa7.28□□□□□ -1.24
CHD6-203ENST00000373233 RABL6Q3YEC7 729 aaPredicted RBP7.28□□□□□ -1.24
CHD6-203ENST00000373233 NCBP1Q09161 790 aaKnown RBP7.28□□□□□ -1.24
CHD6-203ENST00000373233 ITPK1Q13572 414 aa7.28□□□□□ -1.24
CHD6-203ENST00000373233 C16orf87Q6PH81 154 aa7.28□□□□□ -1.24
CHD6-203ENST00000373233 MCM9Q9NXL9 1143 aa7.28□□□□□ -1.24
CHD6-203ENST00000373233 BIN2Q9UBW5 565 aaPredicted RBP7.28□□□□□ -1.24
CHD6-203ENST00000373233 CNTNAP4Q9C0A0 1308 aa7.28□□□□□ -1.24
CHD6-203ENST00000373233 SERPINI2O75830 405 aa7.28□□□□□ -1.24
CHD6-203ENST00000373233 CD2BP2O95400 341 aaKnown RBP7.28□□□□□ -1.24
CHD6-203ENST00000373233 TSPY3P0CV98 308 aa7.28□□□□□ -1.24
CHD6-203ENST00000373233 TSPY8P0CW00 308 aa7.28□□□□□ -1.24
CHD6-203ENST00000373233 LMBRD1Q9NUN5 540 aa7.28□□□□□ -1.24
CHD6-203ENST00000373233 PTPDC1A2A3K4 754 aa7.28□□□□□ -1.24
CHD6-203ENST00000373233 B4E1Z4 1266 aa7.28□□□□□ -1.24
CHD6-203ENST00000373233 FLOT1O75955 427 aa7.28□□□□□ -1.24
CHD6-203ENST00000373233 CFAP157Q5JU67 520 aa7.28□□□□□ -1.24
CHD6-203ENST00000373233 E7EWF7 191 aa7.28□□□□□ -1.24
CHD6-203ENST00000373233 S100BP04271 92 aaPredicted RBP7.28□□□□□ -1.24
CHD6-203ENST00000373233 PYM1Q9BRP8 204 aaKnown RBP7.28□□□□□ -1.24
CHD6-203ENST00000373233 HSPD1P10809 573 aaKnown RBP7.28□□□□□ -1.24
CHD6-203ENST00000373233 LMOD1P29536 600 aaPredicted RBP7.28□□□□□ -1.24
CHD6-203ENST00000373233 SND1Q7KZF4 910 aaKnown RBP eCLIP7.28□□□□□ -1.24
CHD6-203ENST00000373233 CYLC1P35663 651 aaPredicted RBP7.27□□□□□ -1.24
CHD6-203ENST00000373233 IFT20Q8IY31 132 aa7.27□□□□□ -1.24
CHD6-203ENST00000373233 TRIM58Q8NG06 486 aa7.27□□□□□ -1.24
CHD6-203ENST00000373233 TROVE2P10155 538 aaKnown RBP eCLIP7.27□□□□□ -1.25
CHD6-203ENST00000373233 KRT13P13646 458 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 CLCN6P51797 869 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 PI16Q6UXB8 463 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 RUFY4Q6ZNE9 571 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 KIAA0825Q8IV33 1275 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 TMTC2Q8N394 836 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 FBXO41Q8TF61 875 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 TSGA10Q9BZW7 698 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 ZSWIM6Q9HCJ5 1215 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 RHBDL2Q9NX52 303 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 AATFQ9NY61 560 aaKnown RBP eCLIP7.27□□□□□ -1.25
CHD6-203ENST00000373233 ANGEL1Q9UNK9 670 aaKnown RBP7.27□□□□□ -1.25
CHD6-203ENST00000373233 ATP8B1O43520 1251 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 ZSCAN20P17040 1043 aaPredicted RBP7.27□□□□□ -1.25
CHD6-203ENST00000373233 KANK3Q6NY19 840 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 CNGA4Q8IV77 575 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 PPANQ9NQ55 473 aaKnown RBP7.27□□□□□ -1.25
CHD6-203ENST00000373233 IMPACTQ9P2X3 320 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 FAN1Q9Y2M0 1017 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 TACC3Q9Y6A5 838 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 MAST3O60307 1309 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 XDHP47989 1333 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 CNGA1P29973 690 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 TCP11Q8WWU5 503 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 ALG1Q9BT22 464 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 TMEM51Q9NW97 253 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 SAP30BPQ9UHR5 308 aaKnown RBP7.27□□□□□ -1.25
CHD6-203ENST00000373233 ZNF804BA4D1E1 1349 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 TRPC3Q13507 836 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 NAIF1Q69YI7 327 aaPredicted RBP7.27□□□□□ -1.25
CHD6-203ENST00000373233 ZC3H18Q86VM9 953 aaKnown RBP7.27□□□□□ -1.25
CHD6-203ENST00000373233 VPS52Q8N1B4 723 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 LLPHQ9BRT6 129 aaKnown RBP7.27□□□□□ -1.25
CHD6-203ENST00000373233 BSDC1Q9NW68 430 aaPredicted RBP7.27□□□□□ -1.25
CHD6-203ENST00000373233 ETAA1Q9NY74 926 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 RASSF10A6NK89 507 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 PPEF1O14829 653 aaPredicted RBP7.27□□□□□ -1.25
CHD6-203ENST00000373233 CAMTA2O94983 1202 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 SPAG1Q07617 926 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 ZNF34Q8IZ26 560 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 NCOA5Q9HCD5 579 aaKnown RBP7.27□□□□□ -1.25
CHD6-203ENST00000373233 MTMR3Q13615 1198 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 CCHCR1Q8TD31 782 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 MAP4K1Q92918 833 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 KIF9Q9HAQ2 790 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 TFIP11Q9UBB9 837 aaKnown RBP7.27□□□□□ -1.25
CHD6-203ENST00000373233 SCINQ9Y6U3 715 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 PAK2Q13177 524 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 SLFNL1Q499Z3 407 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 SLC44A4Q53GD3 710 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 ACTR5Q9H9F9 607 aaPredicted RBP7.27□□□□□ -1.25
CHD6-203ENST00000373233 MTRF1LQ9UGC7 380 aaKnown RBP7.27□□□□□ -1.25
CHD6-203ENST00000373233 SAMM50Q9Y512 469 aa7.27□□□□□ -1.25
CHD6-203ENST00000373233 SKIP12755 728 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 ADRA2BP18089 450 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 PPARDQ03181 441 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 RASGRF1Q13972 1273 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 CCDC122Q5T0U0 273 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 DPP8Q6V1X1 898 aaPredicted RBP7.26□□□□□ -1.25
CHD6-203ENST00000373233 ZBTB10Q96DT7 871 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 TLDC2A0PJX2 215 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 H0YIN7 160 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 RNF40O75150 1001 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 MCAMP43121 646 aa7.26□□□□□ -1.25
CHD6-203ENST00000373233 TMED10P49755 219 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms