RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 NT5DC4Q86YG4 428 aa7.27□□□□□ -1.25
CHD6-202ENST00000373222 SRBD1Q8N5C6 995 aaKnown RBP7.27□□□□□ -1.25
CHD6-202ENST00000373222 RASGRP4Q8TDF6 673 aa7.27□□□□□ -1.25
CHD6-202ENST00000373222 TIGD1Q96MW7 591 aa7.27□□□□□ -1.25
CHD6-202ENST00000373222 ZSCAN10Q96SZ4 725 aaPredicted RBP7.27□□□□□ -1.25
CHD6-202ENST00000373222 DESI2Q9BSY9 194 aa7.27□□□□□ -1.25
CHD6-202ENST00000373222 CPVLQ9H3G5 476 aa7.27□□□□□ -1.25
CHD6-202ENST00000373222 ZSWIM4Q9H7M6 989 aa7.27□□□□□ -1.25
CHD6-202ENST00000373222 NFE2L3Q9Y4A8 694 aa7.27□□□□□ -1.25
CHD6-202ENST00000373222 IKBKBO14920 756 aa7.26□□□□□ -1.25
CHD6-202ENST00000373222 TEX33O43247 280 aa7.26□□□□□ -1.25
CHD6-202ENST00000373222 ERCC6LQ2NKX8 1250 aa7.26□□□□□ -1.25
CHD6-202ENST00000373222 PARP10Q53GL7 1025 aa7.26□□□□□ -1.25
CHD6-202ENST00000373222 IFIT1BQ5T764 474 aaKnown RBP7.26□□□□□ -1.25
CHD6-202ENST00000373222 TMEM139Q8IV31 216 aa7.26□□□□□ -1.25
CHD6-202ENST00000373222 JMYQ8N9B5 988 aa7.26□□□□□ -1.25
CHD6-202ENST00000373222 ZNF775Q96BV0 537 aaPredicted RBP7.26□□□□□ -1.25
CHD6-202ENST00000373222 NSUN4Q96CB9 384 aaKnown RBP7.26□□□□□ -1.25
CHD6-202ENST00000373222 DYNLL2Q96FJ2 89 aa7.26□□□□□ -1.25
CHD6-202ENST00000373222 BLZF1Q9H2G9 400 aa7.26□□□□□ -1.25
CHD6-202ENST00000373222 ST7Q9NRC1 585 aa7.26□□□□□ -1.25
CHD6-202ENST00000373222 PCNTO95613 3336 aa7.26□□□□□ -1.25
CHD6-202ENST00000373222 VWA3AA6NCI4 1184 aa7.26□□□□□ -1.25
CHD6-202ENST00000373222 KIF3CO14782 793 aa7.26□□□□□ -1.25
CHD6-202ENST00000373222 IBSPP21815 317 aaPredicted RBP7.26□□□□□ -1.25
CHD6-202ENST00000373222 SAFBQ15424 915 aaKnown RBP eCLIP7.26□□□□□ -1.25
CHD6-202ENST00000373222 DIXDC1Q155Q3 683 aa7.26□□□□□ -1.25
CHD6-202ENST00000373222 FBXO38Q6PIJ6 1188 aa7.26□□□□□ -1.25
CHD6-202ENST00000373222 TOGARAM2Q6ZUX3 1019 aa7.26□□□□□ -1.25
CHD6-202ENST00000373222 VSTM4Q8IW00 320 aa7.26□□□□□ -1.25
CHD6-202ENST00000373222 RPUSD2Q8IZ73 545 aaKnown RBP7.26□□□□□ -1.25
CHD6-202ENST00000373222 SLC44A5Q8NCS7 719 aa7.26□□□□□ -1.25
CHD6-202ENST00000373222 ESR2Q92731 530 aa7.26□□□□□ -1.25
CHD6-202ENST00000373222 SYMPKQ92797 1274 aaKnown RBP7.26□□□□□ -1.25
CHD6-202ENST00000373222 GPKOWQ92917 476 aaPredicted RBP eCLIP7.26□□□□□ -1.256e-6■□□□□ 11.1
CHD6-202ENST00000373222 CDC5LQ99459 802 aaKnown RBP7.26□□□□□ -1.25
CHD6-202ENST00000373222 FOXP1Q9H334 677 aaPredicted RBP7.26□□□□□ -1.25
CHD6-202ENST00000373222 ZHX1Q9UKY1 873 aaPredicted RBP7.26□□□□□ -1.25
CHD6-202ENST00000373222 NOVA2Q9UNW9 492 aaKnown RBP7.26□□□□□ -1.25
CHD6-202ENST00000373222 RPS6KL1Q9Y6S9 549 aa7.26□□□□□ -1.25
CHD6-202ENST00000373222 SPATA31A5Q5VU36 1347 aa7.26□□□□□ -1.25
CHD6-202ENST00000373222 SPATA31A7Q8IWB4 1347 aa7.26□□□□□ -1.25
CHD6-202ENST00000373222 DLEC1Q9Y238 1755 aa7.26□□□□□ -1.25
CHD6-202ENST00000373222 SBF2Q86WG5 1849 aa7.26□□□□□ -1.25
CHD6-202ENST00000373222 COL22A1Q8NFW1 1626 aaPredicted RBP7.26□□□□□ -1.25
CHD6-202ENST00000373222 CCDC88AQ3V6T2 1871 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 TNRC6CQ9HCJ0 1690 aaKnown RBP7.25□□□□□ -1.25
CHD6-202ENST00000373222 LOC100996750A0A140TA64 210 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 NRG2O14511 850 aaPredicted RBP7.25□□□□□ -1.25
CHD6-202ENST00000373222 TFRCP02786 760 aaKnown RBP7.25□□□□□ -1.25
CHD6-202ENST00000373222 ZSCAN20P17040 1043 aaPredicted RBP7.25□□□□□ -1.25
CHD6-202ENST00000373222 GNAT2P19087 354 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 APLP1P51693 650 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 GSDMDP57764 484 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 IL17AQ16552 155 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 RILPL1Q5EBL4 403 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 ZFYVE27Q5T4F4 411 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 STAG2Q8N3U4 1231 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 CPLX3Q8WVH0 158 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 PHF20Q9BVI0 1012 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 KRTAP4-6Q9BYQ5 205 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 HMX1Q9NP08 348 aaPredicted RBP7.25□□□□□ -1.25
CHD6-202ENST00000373222 DCP1AQ9NPI6 582 aaPredicted RBP7.25□□□□□ -1.25
CHD6-202ENST00000373222 BSDC1Q9NW68 430 aaPredicted RBP7.25□□□□□ -1.25
CHD6-202ENST00000373222 DNAI1Q9UI46 699 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 G3BP2Q9UN86 482 aaKnown RBP7.25□□□□□ -1.25
CHD6-202ENST00000373222 MAPK8IP1Q9UQF2 711 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 PAXBP1Q9Y5B6 917 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 FAM205AQ6ZU69 1335 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 NID2Q14112 1375 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 KIAA1551Q9HCM1 1747 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 NEMFO60524 1076 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 EIF3JO75822 258 aaKnown RBP7.25□□□□□ -1.25
CHD6-202ENST00000373222 SARSP49591 514 aaKnown RBP7.25□□□□□ -1.25
CHD6-202ENST00000373222 MORC3Q14149 939 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 NFIXQ14938 502 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 SLC35G1Q2M3R5 365 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 PLEKHG6Q3KR16 790 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 TYW1BQ6NUM6 668 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 TRIM65Q6PJ69 517 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 OLFM4Q6UX06 510 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 PIK3AP1Q6ZUJ8 805 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 HOMER1Q86YM7 354 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 REXO1L1PQ8IX06 675 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 EEF2KMTQ96G04 330 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 WDR24Q96S15 920 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 MTRQ99707 1265 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 MAF1Q9H063 256 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 IRF2BPLQ9H1B7 796 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 NPDC1Q9NQX5 325 aaPredicted RBP7.25□□□□□ -1.25
CHD6-202ENST00000373222 IMPACTQ9P2X3 320 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 VPS9D1Q9Y2B5 631 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 SRPRBQ9Y5M8 271 aaKnown RBP7.25□□□□□ -1.25
CHD6-202ENST00000373222 COL4A3BPQ9Y5P4 624 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 CNTNAP5Q8WYK1 1306 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 LAMB1P07942 1786 aa7.25□□□□□ -1.25
CHD6-202ENST00000373222 USP17L3A6NCW0 530 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 USP17L4A6NCW7 530 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 PP2D1A8MPX8 630 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 SH3BP5O60239 455 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms