RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 VPS16Q9H269 839 aa12.21□□□□□ -0.45
LCN2-202ENST00000372998 DCP1AQ9NPI6 582 aaPredicted RBP12.21□□□□□ -0.45
LCN2-202ENST00000372998 LUC7LQ9NQ29 371 aaKnown RBP12.21□□□□□ -0.45
LCN2-202ENST00000372998 MINPP1Q9UNW1 487 aa12.21□□□□□ -0.45
LCN2-202ENST00000372998 SAR1BQ9Y6B6 198 aa12.21□□□□□ -0.45
LCN2-202ENST00000372998 UBE2Q2LH0YL09 131 aa12.2□□□□□ -0.46
LCN2-202ENST00000372998 FANCGO15287 622 aa12.2□□□□□ -0.46
LCN2-202ENST00000372998 SRGNP10124 158 aa12.2□□□□□ -0.46
LCN2-202ENST00000372998 PRLRP16471 622 aa12.2□□□□□ -0.46
LCN2-202ENST00000372998 CCNE1P24864 410 aa12.2□□□□□ -0.46
LCN2-202ENST00000372998 PRCPP42785 496 aa12.2□□□□□ -0.46
LCN2-202ENST00000372998 MTF1Q14872 753 aa12.2□□□□□ -0.46
LCN2-202ENST00000372998 PAPD7Q5XG87 772 aaKnown RBP12.2□□□□□ -0.46
LCN2-202ENST00000372998 CCDC84Q86UT8 332 aaPredicted RBP12.2□□□□□ -0.46
LCN2-202ENST00000372998 NLRP3Q96P20 1036 aa12.2□□□□□ -0.46
LCN2-202ENST00000372998 NAP1L4Q99733 375 aaKnown RBP12.2□□□□□ -0.46
LCN2-202ENST00000372998 C7orf25Q9BPX7 421 aa12.2□□□□□ -0.46
LCN2-202ENST00000372998 SPZ1Q9BXG8 430 aa12.2□□□□□ -0.46
LCN2-202ENST00000372998 ANKZF1Q9H8Y5 726 aa12.2□□□□□ -0.46
LCN2-202ENST00000372998 C6orf50Q9HD87 102 aa12.2□□□□□ -0.46
LCN2-202ENST00000372998 KBTBD4Q9NVX7 518 aa12.2□□□□□ -0.46
LCN2-202ENST00000372998 TAB2Q9NYJ8 693 aa12.2□□□□□ -0.46
LCN2-202ENST00000372998 TNRC6CQ9HCJ0 1690 aaKnown RBP12.19□□□□□ -0.46
LCN2-202ENST00000372998 PRDM1O75626 825 aa12.19□□□□□ -0.46
LCN2-202ENST00000372998 SASH3O75995 380 aa12.19□□□□□ -0.46
LCN2-202ENST00000372998 PLCG2P16885 1265 aa12.19□□□□□ -0.46
LCN2-202ENST00000372998 ACTN2P35609 894 aa12.19□□□□□ -0.46
LCN2-202ENST00000372998 ARHGAP25P42331 645 aa12.19□□□□□ -0.46
LCN2-202ENST00000372998 GYG1P46976 350 aa12.19□□□□□ -0.46
LCN2-202ENST00000372998 RPS8P62241 208 aaKnown RBP12.19□□□□□ -0.46
LCN2-202ENST00000372998 AMPD2Q01433 879 aa12.19□□□□□ -0.46
LCN2-202ENST00000372998 SEPT2Q15019 361 aa12.19□□□□□ -0.46
LCN2-202ENST00000372998 SPA17Q15506 151 aa12.19□□□□□ -0.46
LCN2-202ENST00000372998 SOGA3Q5TF21 947 aa12.19□□□□□ -0.46
LCN2-202ENST00000372998 TRAPPC11Q7Z392 1133 aa12.19□□□□□ -0.46
LCN2-202ENST00000372998 DZIP1Q86YF9 867 aaKnown RBP12.19□□□□□ -0.46
LCN2-202ENST00000372998 SLF2Q8IX21 1173 aa12.19□□□□□ -0.46
LCN2-202ENST00000372998 ZNF444Q8N0Y2 327 aaPredicted RBP12.19□□□□□ -0.46
LCN2-202ENST00000372998 C4orf32Q8N8J7 132 aa12.19□□□□□ -0.46
LCN2-202ENST00000372998 PNMA1Q8ND90 353 aa12.19□□□□□ -0.46
LCN2-202ENST00000372998 TRIM58Q8NG06 486 aa12.19□□□□□ -0.46
LCN2-202ENST00000372998 ZNF507Q8TCN5 953 aa12.19□□□□□ -0.46
LCN2-202ENST00000372998 JAKMIP2Q96AA8 810 aa12.19□□□□□ -0.46
LCN2-202ENST00000372998 CALML4Q96GE6 196 aa12.19□□□□□ -0.46
LCN2-202ENST00000372998 RNF14Q9UBS8 474 aa12.19□□□□□ -0.46
LCN2-202ENST00000372998 STK17AQ9UEE5 414 aa12.19□□□□□ -0.46
LCN2-202ENST00000372998 PUF60Q9UHX1 559 aaKnown RBP12.19□□□□□ -0.46
LCN2-202ENST00000372998 TSKSQ9UJT2 592 aa12.19□□□□□ -0.46
LCN2-202ENST00000372998 ADAM21Q9UKJ8 722 aa12.19□□□□□ -0.46
LCN2-202ENST00000372998 NAV1Q8NEY1 1877 aa12.19□□□□□ -0.46
LCN2-202ENST00000372998 COL16A1Q07092 1604 aaPredicted RBP12.19□□□□□ -0.46
LCN2-202ENST00000372998 CNTNAP4Q9C0A0 1308 aa12.18□□□□□ -0.46
LCN2-202ENST00000372998 COL24A1Q17RW2 1714 aa12.18□□□□□ -0.46
LCN2-202ENST00000372998 NRAPQ86VF7 1730 aa12.18□□□□□ -0.46
LCN2-202ENST00000372998 PVALEFA0A1B0GWK0 134 aa12.18□□□□□ -0.46
LCN2-202ENST00000372998 ESYT2A0FGR8 921 aa12.18□□□□□ -0.46
LCN2-202ENST00000372998 FAM205CA6NFA0 338 aa12.18□□□□□ -0.46
LCN2-202ENST00000372998 ERICH4A6NGS2 130 aa12.18□□□□□ -0.46
LCN2-202ENST00000372998 TULP2O00295 520 aa12.18□□□□□ -0.46
LCN2-202ENST00000372998 TACC1O75410 805 aa12.18□□□□□ -0.46
LCN2-202ENST00000372998 AARSP49588 968 aaKnown RBP eCLIP12.18□□□□□ -0.46
LCN2-202ENST00000372998 USP14P54578 494 aa12.18□□□□□ -0.46
LCN2-202ENST00000372998 HNRNPH2P55795 449 aaKnown RBP12.18□□□□□ -0.46
LCN2-202ENST00000372998 PPP4CP60510 307 aa12.18□□□□□ -0.46
LCN2-202ENST00000372998 ERVK-24P63145 666 aa12.18□□□□□ -0.46
LCN2-202ENST00000372998 DYNLL1P63167 89 aaKnown RBP12.18□□□□□ -0.46
LCN2-202ENST00000372998 MECOMQ03112 1051 aa12.18□□□□□ -0.46
LCN2-202ENST00000372998 KIF5AQ12840 1032 aa12.18□□□□□ -0.46
LCN2-202ENST00000372998 PSMD2Q13200 908 aa12.18□□□□□ -0.46
LCN2-202ENST00000372998 CASP8Q14790 479 aa12.18□□□□□ -0.46
LCN2-202ENST00000372998 NONOQ15233 471 aaKnown RBP eCLIP12.18□□□□□ -0.46
LCN2-202ENST00000372998 ZSCAN26Q16670 478 aa12.18□□□□□ -0.46
LCN2-202ENST00000372998 EARS2Q5JPH6 523 aaKnown RBP12.18□□□□□ -0.46
LCN2-202ENST00000372998 CCDC122Q5T0U0 273 aa12.18□□□□□ -0.46
LCN2-202ENST00000372998 ADGRA1Q86SQ6 560 aa12.18□□□□□ -0.46
LCN2-202ENST00000372998 CSGALNACT2Q8N6G5 542 aa12.18□□□□□ -0.46
LCN2-202ENST00000372998 P2RX5Q93086 422 aa12.18□□□□□ -0.46
LCN2-202ENST00000372998 ERGIC2Q96RQ1 377 aa12.18□□□□□ -0.46
LCN2-202ENST00000372998 SLF1Q9BQI6 1058 aa12.18□□□□□ -0.46
LCN2-202ENST00000372998 MKNK2Q9HBH9 465 aa12.18□□□□□ -0.46
LCN2-202ENST00000372998 BARHL2Q9NY43 387 aa12.18□□□□□ -0.46
LCN2-202ENST00000372998 LEMD3Q9Y2U8 911 aa12.18□□□□□ -0.46
LCN2-202ENST00000372998 M0R2N6 131 aa12.17□□□□□ -0.46
LCN2-202ENST00000372998 OR52Z1P0C646 297 aa12.17□□□□□ -0.46
LCN2-202ENST00000372998 TRIM21P19474 475 aaKnown RBP12.17□□□□□ -0.46
LCN2-202ENST00000372998 HNRNPH3P31942 346 aaKnown RBP12.17□□□□□ -0.46
LCN2-202ENST00000372998 MTIF2P46199 727 aaKnown RBP12.17□□□□□ -0.46
LCN2-202ENST00000372998 TBC1D8BQ0IIM8 1120 aa12.17□□□□□ -0.46
LCN2-202ENST00000372998 TMEM266Q2M3C6 531 aa12.17□□□□□ -0.46
LCN2-202ENST00000372998 RC3H1Q5TC82 1133 aaKnown RBP12.17□□□□□ -0.46
LCN2-202ENST00000372998 C12orf60Q5U649 245 aa12.17□□□□□ -0.46
LCN2-202ENST00000372998 TTI2Q6NXR4 508 aa12.17□□□□□ -0.46
LCN2-202ENST00000372998 BARGINQ6ZT62 677 aa12.17□□□□□ -0.46
LCN2-202ENST00000372998 CABP7Q86V35 215 aa12.17□□□□□ -0.46
LCN2-202ENST00000372998 ACRBPQ8NEB7 543 aa12.17□□□□□ -0.46
LCN2-202ENST00000372998 ALS2CR12Q96Q35 445 aa12.17□□□□□ -0.46
LCN2-202ENST00000372998 TUBGCP2Q9BSJ2 902 aa12.17□□□□□ -0.46
LCN2-202ENST00000372998 BLZF1Q9H2G9 400 aa12.17□□□□□ -0.46
LCN2-202ENST00000372998 ABCB6Q9NP58 842 aa12.17□□□□□ -0.46
LCN2-202ENST00000372998 SEC63Q9UGP8 760 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms