RNA–Protein interactions for RNA: ENST00000372994.1

C9orf16-201, Transcript of chromosome 9 open reading frame 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf16, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-201ENST00000372994 ANKRD35Q8N283 1001 aa17.68■□□□□ 0.42
C9orf16-201ENST00000372994 NEDD4P46934 1319 aa17.68■□□□□ 0.42
C9orf16-201ENST00000372994 SNAI1O95863 264 aaPredicted RBP17.67■□□□□ 0.42
C9orf16-201ENST00000372994 TAL1P17542 331 aaPredicted RBP17.67■□□□□ 0.42
C9orf16-201ENST00000372994 IMMTQ16891 758 aaKnown RBP17.67■□□□□ 0.42
C9orf16-201ENST00000372994 LRRC26Q2I0M4 334 aa17.67■□□□□ 0.42
C9orf16-201ENST00000372994 CCDC96Q2M329 555 aa17.67■□□□□ 0.42
C9orf16-201ENST00000372994 GJC2Q5T442 439 aaPredicted RBP17.67■□□□□ 0.42
C9orf16-201ENST00000372994 ANO1Q5XXA6 986 aa17.67■□□□□ 0.42
C9orf16-201ENST00000372994 TTBK2Q6IQ55 1244 aa17.67■□□□□ 0.42
C9orf16-201ENST00000372994 FGD4Q96M96 766 aa17.67■□□□□ 0.42
C9orf16-201ENST00000372994 SENP6Q9GZR1 1112 aaPredicted RBP17.67■□□□□ 0.42
C9orf16-201ENST00000372994 ACAD9Q9H845 621 aa17.67■□□□□ 0.42
C9orf16-201ENST00000372994 RBM27Q9P2N5 1060 aaKnown RBP17.67■□□□□ 0.42
C9orf16-201ENST00000372994 MTMR7Q9Y216 660 aa17.67■□□□□ 0.42
C9orf16-201ENST00000372994 CNPY2Q9Y2B0 182 aa17.67■□□□□ 0.42
C9orf16-201ENST00000372994 SNHG28P0DPA3 235 aa17.66■□□□□ 0.42
C9orf16-201ENST00000372994 PDHBP11177 359 aa17.66■□□□□ 0.42
C9orf16-201ENST00000372994 CCDC178Q5BJE1 867 aa17.66■□□□□ 0.42
C9orf16-201ENST00000372994 ANKS1AQ92625 1134 aa17.66■□□□□ 0.42
C9orf16-201ENST00000372994 TRERF1Q96PN7 1200 aa17.66■□□□□ 0.42
C9orf16-201ENST00000372994 HOMER2Q9NSB8 354 aa17.66■□□□□ 0.42
C9orf16-201ENST00000372994 RNF146Q9NTX7 359 aa17.66■□□□□ 0.42
C9orf16-201ENST00000372994 RAD50Q92878 1312 aa17.66■□□□□ 0.42
C9orf16-201ENST00000372994 LAMA3Q16787 3333 aa17.65■□□□□ 0.42
C9orf16-201ENST00000372994 KBTBD13C9JR72 458 aa17.65■□□□□ 0.42
C9orf16-201ENST00000372994 KDM4AO75164 1064 aa17.65■□□□□ 0.42
C9orf16-201ENST00000372994 ICAM1P05362 532 aa17.65■□□□□ 0.42
C9orf16-201ENST00000372994 RARBP10826 455 aa17.65■□□□□ 0.42
C9orf16-201ENST00000372994 AKR1A1P14550 325 aa17.65■□□□□ 0.42
C9orf16-201ENST00000372994 CHMLP26374 656 aa17.65■□□□□ 0.42
C9orf16-201ENST00000372994 SLC16A2P36021 539 aa17.65■□□□□ 0.42
C9orf16-201ENST00000372994 FXR1P51114 621 aaKnown RBP eCLIP17.65■□□□□ 0.42
C9orf16-201ENST00000372994 SNAP25P60880 206 aa17.65■□□□□ 0.42
C9orf16-201ENST00000372994 LRRC41Q15345 812 aa17.65■□□□□ 0.42
C9orf16-201ENST00000372994 CCDC174Q6PII3 467 aa17.65■□□□□ 0.42
C9orf16-201ENST00000372994 IQCA1Q86XH1 822 aa17.65■□□□□ 0.42
C9orf16-201ENST00000372994 FAM133AQ8N9E0 248 aa17.65■□□□□ 0.42
C9orf16-201ENST00000372994 RUFY2Q8WXA3 655 aa17.65■□□□□ 0.42
C9orf16-201ENST00000372994 ZKSCAN3Q9BRR0 538 aa17.65■□□□□ 0.42
C9orf16-201ENST00000372994 RANBP17Q9H2T7 1088 aaKnown RBP17.65■□□□□ 0.42
C9orf16-201ENST00000372994 A1CFQ9NQ94 594 aaKnown RBP17.65■□□□□ 0.42
C9orf16-201ENST00000372994 ZSWIM5Q9P217 1185 aa17.65■□□□□ 0.42
C9orf16-201ENST00000372994 MCM3APO60318 1980 aa17.65■□□□□ 0.42
C9orf16-201ENST00000372994 SZT2Q5T011 3432 aa17.65■□□□□ 0.42
C9orf16-201ENST00000372994 ALAS1P13196 640 aa17.64■□□□□ 0.41
C9orf16-201ENST00000372994 CNTN2Q02246 1040 aa17.64■□□□□ 0.41
C9orf16-201ENST00000372994 ZNF543Q08ER8 600 aa17.64■□□□□ 0.41
C9orf16-201ENST00000372994 SYDE2Q5VT97 1194 aa17.64■□□□□ 0.41
C9orf16-201ENST00000372994 CNNM2Q9H8M5 875 aa17.64■□□□□ 0.41
C9orf16-201ENST00000372994 GPCPD1Q9NPB8 672 aa17.64■□□□□ 0.41
C9orf16-201ENST00000372994 XPNPEP3Q9NQH7 507 aa17.64■□□□□ 0.41
C9orf16-201ENST00000372994 FRMPD2Q68DX3 1309 aaPredicted RBP17.64■□□□□ 0.41
C9orf16-201ENST00000372994 B4E1Z4 1266 aa17.63■□□□□ 0.41
C9orf16-201ENST00000372994 POTEB2H3BUK9 544 aa17.63■□□□□ 0.41
C9orf16-201ENST00000372994 ACVR2BQ13705 512 aa17.63■□□□□ 0.41
C9orf16-201ENST00000372994 MUM1L1Q5H9M0 696 aa17.63■□□□□ 0.41
C9orf16-201ENST00000372994 GPATCH4Q5T3I0 446 aaKnown RBP17.63■□□□□ 0.41
C9orf16-201ENST00000372994 ZSCAN10Q96SZ4 725 aaPredicted RBP17.63■□□□□ 0.41
C9orf16-201ENST00000372994 GDF15Q99988 308 aa17.63■□□□□ 0.41
C9orf16-201ENST00000372994 KRT23Q9C075 422 aa17.63■□□□□ 0.41
C9orf16-201ENST00000372994 ABHD16BQ9H3Z7 469 aa17.63■□□□□ 0.41
C9orf16-201ENST00000372994 FAM184BQ9ULE4 1060 aa17.63■□□□□ 0.41
C9orf16-201ENST00000372994 CCPG1Q9ULG6 757 aa17.63■□□□□ 0.41
C9orf16-201ENST00000372994 ZMYND8Q9ULU4 1186 aaPredicted RBP17.63■□□□□ 0.41
C9orf16-201ENST00000372994 A0A1W2PPC1 479 aa17.62■□□□□ 0.41
C9orf16-201ENST00000372994 SYN1P17600 705 aa17.62■□□□□ 0.41
C9orf16-201ENST00000372994 BMP8BP34820 402 aa17.62■□□□□ 0.41
C9orf16-201ENST00000372994 SLC39A5Q6ZMH5 540 aa17.62■□□□□ 0.41
C9orf16-201ENST00000372994 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.62■□□□□ 0.41
C9orf16-201ENST00000372994 CYP39A1Q9NYL5 469 aa17.62■□□□□ 0.41
C9orf16-201ENST00000372994 SOWAHBA6NEL2 793 aa17.61■□□□□ 0.41
C9orf16-201ENST00000372994 SGSM2O43147 1006 aa17.61■□□□□ 0.41
C9orf16-201ENST00000372994 PGK1P00558 417 aa17.61■□□□□ 0.41
C9orf16-201ENST00000372994 MYCNP04198 464 aaPredicted RBP17.61■□□□□ 0.41
C9orf16-201ENST00000372994 ADCYAP1R1P41586 468 aa17.61■□□□□ 0.41
C9orf16-201ENST00000372994 ATN1P54259 1190 aaPredicted RBP17.61■□□□□ 0.41
C9orf16-201ENST00000372994 PTH1RQ03431 593 aa17.61■□□□□ 0.41
C9orf16-201ENST00000372994 SNX17Q15036 470 aa17.61■□□□□ 0.41
C9orf16-201ENST00000372994 C1orf53Q5VUE5 145 aa17.61■□□□□ 0.41
C9orf16-201ENST00000372994 ARMCX2Q7L311 632 aa17.61■□□□□ 0.41
C9orf16-201ENST00000372994 RNF180Q86T96 592 aa17.61■□□□□ 0.41
C9orf16-201ENST00000372994 CCDC144CPQ8IYA2 1237 aa17.61■□□□□ 0.41
C9orf16-201ENST00000372994 ENAHQ8N8S7 591 aaPredicted RBP17.61■□□□□ 0.41
C9orf16-201ENST00000372994 PNMA1Q8ND90 353 aa17.61■□□□□ 0.41
C9orf16-201ENST00000372994 KATNBL1Q9H079 304 aa17.61■□□□□ 0.41
C9orf16-201ENST00000372994 ZHX1Q9UKY1 873 aaPredicted RBP17.61■□□□□ 0.41
C9orf16-201ENST00000372994 PNMA2Q9UL42 364 aa17.61■□□□□ 0.41
C9orf16-201ENST00000372994 PHF24Q9UPV7 400 aa17.61■□□□□ 0.41
C9orf16-201ENST00000372994 ASB14A6NK59 587 aa17.6■□□□□ 0.41
C9orf16-201ENST00000372994 ADAMTS4O75173 837 aa17.6■□□□□ 0.41
C9orf16-201ENST00000372994 DUSP11O75319 330 aaKnown RBP17.6■□□□□ 0.41
C9orf16-201ENST00000372994 KAT14Q9H8E8 782 aa17.6■□□□□ 0.41
C9orf16-201ENST00000372994 U3KPZ7 1027 aaPredicted RBP17.6■□□□□ 0.41
C9orf16-201ENST00000372994 TNKSO95271 1327 aa17.6■□□□□ 0.41
C9orf16-201ENST00000372994 LAMA2P24043 3122 aaKnown RBP17.59■□□□□ 0.41
C9orf16-201ENST00000372994 ASTN1O14525 1302 aa17.59■□□□□ 0.41
C9orf16-201ENST00000372994 CYP21A2P08686 494 aa17.59■□□□□ 0.41
C9orf16-201ENST00000372994 MAGEA10P43363 369 aaPredicted RBP17.59■□□□□ 0.41
C9orf16-201ENST00000372994 RTP1P59025 263 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms