RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 NUP62CLQ9H1M0 184 aa18.45■□□□□ 0.54
C9orf78-201ENST00000372447 DDX19AQ9NUU7 478 aaKnown RBP18.45■□□□□ 0.54
C9orf78-201ENST00000372447 DACT1Q9NYF0 836 aa18.45■□□□□ 0.54
C9orf78-201ENST00000372447 STK36Q9NRP7 1315 aa18.44■□□□□ 0.54
C9orf78-201ENST00000372447 MYH15Q9Y2K3 1946 aa18.44■□□□□ 0.54
C9orf78-201ENST00000372447 CATSPERGQ6ZRH7 1159 aa18.44■□□□□ 0.54
C9orf78-201ENST00000372447 KCTD1Q719H9 257 aa18.44■□□□□ 0.54
C9orf78-201ENST00000372447 DCAF4Q8WV16 495 aa18.44■□□□□ 0.54
C9orf78-201ENST00000372447 FUCA2Q9BTY2 467 aa18.44■□□□□ 0.54
C9orf78-201ENST00000372447 GJB4Q9NTQ9 266 aa18.44■□□□□ 0.54
C9orf78-201ENST00000372447 USP17L15C9J2P7 530 aa18.43■□□□□ 0.54
C9orf78-201ENST00000372447 USP17L13C9JLJ4 530 aa18.43■□□□□ 0.54
C9orf78-201ENST00000372447 USP17L11C9JVI0 530 aa18.43■□□□□ 0.54
C9orf78-201ENST00000372447 USP17L18D6R9N7 530 aa18.43■□□□□ 0.54
C9orf78-201ENST00000372447 USP17L22D6RA61 530 aa18.43■□□□□ 0.54
C9orf78-201ENST00000372447 USP17L17D6RBQ6 530 aa18.43■□□□□ 0.54
C9orf78-201ENST00000372447 USP17L19D6RCP7 530 aa18.43■□□□□ 0.54
C9orf78-201ENST00000372447 USP17L20D6RJB6 530 aa18.43■□□□□ 0.54
C9orf78-201ENST00000372447 IFNAR1P17181 557 aa18.43■□□□□ 0.54
C9orf78-201ENST00000372447 SSRP1Q08945 709 aaKnown RBP18.43■□□□□ 0.54
C9orf78-201ENST00000372447 USP17L24Q0WX57 530 aa18.43■□□□□ 0.54
C9orf78-201ENST00000372447 RTN1Q16799 776 aa18.43■□□□□ 0.54
C9orf78-201ENST00000372447 TRIM44Q96DX7 344 aaPredicted RBP18.43■□□□□ 0.54
C9orf78-201ENST00000372447 TANGO6Q9C0B7 1094 aa18.43■□□□□ 0.54
C9orf78-201ENST00000372447 RTEL1Q9NZ71 1219 aa18.43■□□□□ 0.54
C9orf78-201ENST00000372447 SLC45A1Q9Y2W3 748 aa18.43■□□□□ 0.54
C9orf78-201ENST00000372447 LOC285556D6RIA3 1793 aa18.43■□□□□ 0.54
C9orf78-201ENST00000372447 FRMPD2Q68DX3 1309 aaPredicted RBP18.43■□□□□ 0.54
C9orf78-201ENST00000372447 CCDC196A0A1B0GTZ2 297 aa18.42■□□□□ 0.54
C9orf78-201ENST00000372447 FMNL1O95466 1100 aaPredicted RBP18.42■□□□□ 0.54
C9orf78-201ENST00000372447 GOLGA8HP0CJ92 632 aa18.42■□□□□ 0.54
C9orf78-201ENST00000372447 NUP133Q8WUM0 1156 aa18.42■□□□□ 0.54
C9orf78-201ENST00000372447 AIFM3Q96NN9 605 aa18.42■□□□□ 0.54
C9orf78-201ENST00000372447 ASCC2Q9H1I8 757 aaPredicted RBP18.42■□□□□ 0.54
C9orf78-201ENST00000372447 KIF28PB7ZC32 967 aa18.42■□□□□ 0.54
C9orf78-201ENST00000372447 TMEM232C9JQI7 657 aa18.42■□□□□ 0.54
C9orf78-201ENST00000372447 NR1I2O75469 434 aa18.42■□□□□ 0.54
C9orf78-201ENST00000372447 DDAH1O94760 285 aa18.42■□□□□ 0.54
C9orf78-201ENST00000372447 CYP2C8P10632 490 aa18.42■□□□□ 0.54
C9orf78-201ENST00000372447 ZNF543Q08ER8 600 aa18.42■□□□□ 0.54
C9orf78-201ENST00000372447 PABPC4Q13310 644 aaKnown RBP eCLIP18.42■□□□□ 0.544e-7■■■□□ 16.8
C9orf78-201ENST00000372447 CCDC96Q2M329 555 aa18.42■□□□□ 0.54
C9orf78-201ENST00000372447 MYSM1Q5VVJ2 828 aa18.42■□□□□ 0.54
C9orf78-201ENST00000372447 TTBK2Q6IQ55 1244 aa18.42■□□□□ 0.54
C9orf78-201ENST00000372447 SLC26A6Q9BXS9 759 aa18.42■□□□□ 0.54
C9orf78-201ENST00000372447 GPCPD1Q9NPB8 672 aa18.42■□□□□ 0.54
C9orf78-201ENST00000372447 FBXO28Q9NVF7 368 aa18.42■□□□□ 0.54
C9orf78-201ENST00000372447 FLOT1O75955 427 aa18.41■□□□□ 0.54
C9orf78-201ENST00000372447 KRT40Q6A162 431 aa18.41■□□□□ 0.54
C9orf78-201ENST00000372447 STAG2Q8N3U4 1231 aa18.41■□□□□ 0.54
C9orf78-201ENST00000372447 FANCBQ8NB91 859 aa18.41■□□□□ 0.54
C9orf78-201ENST00000372447 WASF1Q92558 559 aa18.41■□□□□ 0.54
C9orf78-201ENST00000372447 P2RX7Q99572 595 aaKnown RBP18.41■□□□□ 0.54
C9orf78-201ENST00000372447 TNMDQ9H2S6 317 aa18.41■□□□□ 0.54
C9orf78-201ENST00000372447 CLSTN2Q9H4D0 955 aa18.41■□□□□ 0.54
C9orf78-201ENST00000372447 ZCCHC17Q9NP64 241 aaKnown RBP18.41■□□□□ 0.54
C9orf78-201ENST00000372447 MAD2L2Q9UI95 211 aa18.41■□□□□ 0.54
C9orf78-201ENST00000372447 PARP1P09874 1014 aaKnown RBP18.4■□□□□ 0.54
C9orf78-201ENST00000372447 CCDC192P0DO97 292 aa18.4■□□□□ 0.54
C9orf78-201ENST00000372447 OSBPP22059 807 aa18.4■□□□□ 0.54
C9orf78-201ENST00000372447 IRX3P78415 501 aaPredicted RBP18.4■□□□□ 0.54
C9orf78-201ENST00000372447 TRIM29Q14134 588 aa18.4■□□□□ 0.54
C9orf78-201ENST00000372447 COG2Q14746 738 aa18.4■□□□□ 0.54
C9orf78-201ENST00000372447 GRM4Q14833 912 aa18.4■□□□□ 0.54
C9orf78-201ENST00000372447 CAMK4Q16566 473 aa18.4■□□□□ 0.54
C9orf78-201ENST00000372447 UVSSAQ2YD98 709 aa18.4■□□□□ 0.54
C9orf78-201ENST00000372447 PDLIM2Q96JY6 352 aa18.4■□□□□ 0.54
C9orf78-201ENST00000372447 MAP3K14Q99558 947 aa18.4■□□□□ 0.54
C9orf78-201ENST00000372447 RTN4Q9NQC3 1192 aaKnown RBP18.4■□□□□ 0.54
C9orf78-201ENST00000372447 POLR3EQ9NVU0 708 aa18.4■□□□□ 0.54
C9orf78-201ENST00000372447 FEM1BQ9UK73 627 aa18.4■□□□□ 0.54
C9orf78-201ENST00000372447 THSD7BQ9C0I4 1608 aa18.4■□□□□ 0.54
C9orf78-201ENST00000372447 PALM3A6NDB9 673 aaPredicted RBP18.4■□□□□ 0.54
C9orf78-201ENST00000372447 CALM1P0DP23 149 aa18.4■□□□□ 0.54
C9orf78-201ENST00000372447 CALM2P0DP24 149 aa18.4■□□□□ 0.54
C9orf78-201ENST00000372447 CALM3P0DP25 149 aa18.4■□□□□ 0.54
C9orf78-201ENST00000372447 ME1P48163 572 aa18.4■□□□□ 0.54
C9orf78-201ENST00000372447 PPP2R5BQ15173 497 aa18.4■□□□□ 0.54
C9orf78-201ENST00000372447 TAF1CQ15572 869 aaPredicted RBP18.4■□□□□ 0.54
C9orf78-201ENST00000372447 GPATCH4Q5T3I0 446 aaKnown RBP18.4■□□□□ 0.54
C9orf78-201ENST00000372447 CCAR1Q8IX12 1150 aaKnown RBP18.4■□□□□ 0.54
C9orf78-201ENST00000372447 TRIM22Q8IYM9 498 aa18.4■□□□□ 0.54
C9orf78-201ENST00000372447 LINC00301Q8NCQ3 95 aa18.4■□□□□ 0.54
C9orf78-201ENST00000372447 RNF186Q9NXI6 227 aa18.4■□□□□ 0.54
C9orf78-201ENST00000372447 HOXC10Q9NYD6 342 aa18.4■□□□□ 0.54
C9orf78-201ENST00000372447 PNMA3Q9UL41 463 aa18.4■□□□□ 0.54
C9orf78-201ENST00000372447 CLIC4Q9Y696 253 aa18.4■□□□□ 0.54
C9orf78-201ENST00000372447 YEATS4O95619 227 aa18.39■□□□□ 0.53
C9orf78-201ENST00000372447 ALDH1A1P00352 501 aa18.39■□□□□ 0.53
C9orf78-201ENST00000372447 DSG3P32926 999 aa18.39■□□□□ 0.53
C9orf78-201ENST00000372447 SLC16A2P36021 539 aa18.39■□□□□ 0.53
C9orf78-201ENST00000372447 STAT2P52630 851 aa18.39■□□□□ 0.53
C9orf78-201ENST00000372447 ASPRV1Q53RT3 343 aa18.39■□□□□ 0.53
C9orf78-201ENST00000372447 POTEEQ6S8J3 1075 aa18.39■□□□□ 0.53
C9orf78-201ENST00000372447 SAMD1Q6SPF0 538 aaPredicted RBP18.39■□□□□ 0.53
C9orf78-201ENST00000372447 RBM43Q6ZSC3 357 aaKnown RBP18.39■□□□□ 0.53
C9orf78-201ENST00000372447 NBPF11Q86T75 865 aa18.39■□□□□ 0.53
C9orf78-201ENST00000372447 SLF1Q9BQI6 1058 aa18.39■□□□□ 0.53
C9orf78-201ENST00000372447 UBA5Q9GZZ9 404 aa18.39■□□□□ 0.53
C9orf78-201ENST00000372447 CPVLQ9H3G5 476 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms