RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 SYDE2Q5VT97 1194 aa21.15■□□□□ 0.98
VEGFA-206ENST00000372077 C12orf42Q96LP6 360 aa21.15■□□□□ 0.98
VEGFA-206ENST00000372077 ZKSCAN5Q9Y2L8 839 aa21.15■□□□□ 0.98
VEGFA-206ENST00000372077 KIF28PB7ZC32 967 aa21.15■□□□□ 0.98
VEGFA-206ENST00000372077 hCG_1984214I3L0E3 225 aa21.15■□□□□ 0.98
VEGFA-206ENST00000372077 STXBP3O00186 592 aa21.15■□□□□ 0.98
VEGFA-206ENST00000372077 U2AF2P26368 475 aaKnown RBP eCLIP21.15■□□□□ 0.982e-48■□□□□ 11.2
VEGFA-206ENST00000372077 ZNF713Q8N859 430 aaPredicted RBP21.15■□□□□ 0.98
VEGFA-206ENST00000372077 GPKOWQ92917 476 aaPredicted RBP eCLIP21.15■□□□□ 0.989e-7■□□□□ 11
VEGFA-206ENST00000372077 STAT2P52630 851 aa21.14■□□□□ 0.98
VEGFA-206ENST00000372077 FMR1Q06787 632 aaKnown RBP eCLIP21.14■□□□□ 0.98
VEGFA-206ENST00000372077 NPY5RQ15761 445 aa21.14■□□□□ 0.98
VEGFA-206ENST00000372077 LDLRAD1Q5T700 205 aa21.14■□□□□ 0.98
VEGFA-206ENST00000372077 ZBTB5O15062 677 aa21.14■□□□□ 0.97
VEGFA-206ENST00000372077 TTLL12Q14166 644 aaPredicted RBP21.14■□□□□ 0.97
VEGFA-206ENST00000372077 SAFBQ15424 915 aaKnown RBP eCLIP21.14■□□□□ 0.97
VEGFA-206ENST00000372077 TYW1BQ6NUM6 668 aa21.14■□□□□ 0.97
VEGFA-206ENST00000372077 BRAPQ7Z569 592 aa21.14■□□□□ 0.97
VEGFA-206ENST00000372077 CHURC1Q8WUH1 139 aa21.14■□□□□ 0.97
VEGFA-206ENST00000372077 FEM1BQ9UK73 627 aa21.14■□□□□ 0.97
VEGFA-206ENST00000372077 UNCXA6NJT0 531 aa21.14■□□□□ 0.97
VEGFA-206ENST00000372077 PDE4CQ08493 712 aa21.14■□□□□ 0.97
VEGFA-206ENST00000372077 HEATR3Q7Z4Q2 680 aa21.14■□□□□ 0.97
VEGFA-206ENST00000372077 FAM160B2Q86V87 743 aa21.14■□□□□ 0.97
VEGFA-206ENST00000372077 DIS3L2Q8IYB7 885 aaKnown RBP21.14■□□□□ 0.97
VEGFA-206ENST00000372077 SYAP1Q96A49 352 aaPredicted RBP21.14■□□□□ 0.97
VEGFA-206ENST00000372077 FOXP1Q9H334 677 aaPredicted RBP21.14■□□□□ 0.97
VEGFA-206ENST00000372077 UQCRHLA0A096LP55 91 aa21.13■□□□□ 0.97
VEGFA-206ENST00000372077 AP5Z1O43299 807 aa21.13■□□□□ 0.97
VEGFA-206ENST00000372077 UQCRHP07919 91 aa21.13■□□□□ 0.97
VEGFA-206ENST00000372077 SH3D19Q5HYK7 790 aa21.13■□□□□ 0.97
VEGFA-206ENST00000372077 PRR12Q9ULL5 1215 aa21.13■□□□□ 0.97
VEGFA-206ENST00000372077 TRIM75PA6NK02 468 aa21.13■□□□□ 0.97
VEGFA-206ENST00000372077 CLMNQ96JQ2 1002 aa21.13■□□□□ 0.97
VEGFA-206ENST00000372077 BTBD18B2RXH4 712 aa21.12■□□□□ 0.97
VEGFA-206ENST00000372077 PPP1R11O60927 126 aaPredicted RBP21.12■□□□□ 0.97
VEGFA-206ENST00000372077 PPATQ06203 517 aa21.12■□□□□ 0.97
VEGFA-206ENST00000372077 DGKZQ13574 1117 aa21.12■□□□□ 0.97
VEGFA-206ENST00000372077 ERO1BQ86YB8 467 aa21.12■□□□□ 0.97
VEGFA-206ENST00000372077 CCDC148Q8NFR7 591 aa21.12■□□□□ 0.97
VEGFA-206ENST00000372077 SPDYE5A6NIY4 337 aa21.12■□□□□ 0.97
VEGFA-206ENST00000372077 LIG1P18858 919 aa21.12■□□□□ 0.97
VEGFA-206ENST00000372077 VCAM1P19320 739 aa21.12■□□□□ 0.97
VEGFA-206ENST00000372077 NLRP5P59047 1200 aa21.12■□□□□ 0.97
VEGFA-206ENST00000372077 FKBP1BP68106 108 aa21.12■□□□□ 0.97
VEGFA-206ENST00000372077 IKQ13123 557 aaPredicted RBP21.12■□□□□ 0.97
VEGFA-206ENST00000372077 QRICH1Q2TAL8 776 aa21.12■□□□□ 0.97
VEGFA-206ENST00000372077 RBM46Q8TBY0 533 aaKnown RBP21.12■□□□□ 0.97
VEGFA-206ENST00000372077 ELP3Q9H9T3 547 aa21.12■□□□□ 0.97
VEGFA-206ENST00000372077 CALML3P27482 149 aa21.11■□□□□ 0.97
VEGFA-206ENST00000372077 CDC37Q16543 378 aaPredicted RBP21.11■□□□□ 0.97
VEGFA-206ENST00000372077 CHADLQ6NUI6 762 aa21.11■□□□□ 0.97
VEGFA-206ENST00000372077 OXER1Q8TDS5 423 aa21.11■□□□□ 0.97
VEGFA-206ENST00000372077 KRT2P35908 639 aa21.11■□□□□ 0.97
VEGFA-206ENST00000372077 GALNT17Q6IS24 598 aa21.11■□□□□ 0.97
VEGFA-206ENST00000372077 DAGLBQ8NCG7 672 aa21.11■□□□□ 0.97
VEGFA-206ENST00000372077 CCDC12Q8WUD4 166 aaPredicted RBP21.11■□□□□ 0.97
VEGFA-206ENST00000372077 ZMYND12Q9H0C1 365 aa21.11■□□□□ 0.97
VEGFA-206ENST00000372077 MYH15Q9Y2K3 1946 aa21.11■□□□□ 0.97
VEGFA-206ENST00000372077 ITGBL1O95965 494 aaPredicted RBP21.1■□□□□ 0.97
VEGFA-206ENST00000372077 CNKSR2Q8WXI2 1034 aa21.1■□□□□ 0.97
VEGFA-206ENST00000372077 ESYT2A0FGR8 921 aa21.1■□□□□ 0.97
VEGFA-206ENST00000372077 HMGCS2P54868 508 aa21.1■□□□□ 0.97
VEGFA-206ENST00000372077 CCDC183Q5T5S1 534 aa21.1■□□□□ 0.97
VEGFA-206ENST00000372077 ATL3Q6DD88 541 aa21.1■□□□□ 0.97
VEGFA-206ENST00000372077 TNFRSF25Q93038 417 aa21.1■□□□□ 0.97
VEGFA-206ENST00000372077 FTOQ9C0B1 505 aaKnown RBP eCLIP21.1■□□□□ 0.975e-19■□□□□ 10.1
VEGFA-206ENST00000372077 NAPAP54920 295 aa21.1■□□□□ 0.97
VEGFA-206ENST00000372077 PPP1R18Q6NYC8 613 aa21.1■□□□□ 0.97
VEGFA-206ENST00000372077 NOSTRINQ8IVI9 506 aa21.1■□□□□ 0.97
VEGFA-206ENST00000372077 COA7Q96BR5 231 aa21.1■□□□□ 0.97
VEGFA-206ENST00000372077 RANBP17Q9H2T7 1088 aaKnown RBP21.1■□□□□ 0.97
VEGFA-206ENST00000372077 ZNF408Q9H9D4 720 aa21.1■□□□□ 0.97
VEGFA-206ENST00000372077 BRMS1Q9HCU9 246 aa21.1■□□□□ 0.97
VEGFA-206ENST00000372077 FBXO28Q9NVF7 368 aa21.1■□□□□ 0.97
VEGFA-206ENST00000372077 CCDC39Q9UFE4 941 aa21.1■□□□□ 0.97
VEGFA-206ENST00000372077 PCDHA4Q9UN74 947 aa21.1■□□□□ 0.97
VEGFA-206ENST00000372077 NR5A1Q13285 461 aa21.09■□□□□ 0.97
VEGFA-206ENST00000372077 GNL2Q13823 731 aaKnown RBP21.09■□□□□ 0.97
VEGFA-206ENST00000372077 MYSM1Q5VVJ2 828 aa21.09■□□□□ 0.97
VEGFA-206ENST00000372077 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.09■□□□□ 0.97
VEGFA-206ENST00000372077 ERCC4Q92889 916 aaPredicted RBP21.09■□□□□ 0.97
VEGFA-206ENST00000372077 RPAP3Q9H6T3 665 aaPredicted RBP21.09■□□□□ 0.97
VEGFA-206ENST00000372077 KRT85P78386 507 aa21.09■□□□□ 0.97
VEGFA-206ENST00000372077 GBA2Q9HCG7 927 aaPredicted RBP21.09■□□□□ 0.97
VEGFA-206ENST00000372077 M0R2N6 131 aa21.08■□□□□ 0.97
VEGFA-206ENST00000372077 CXCL11O14625 94 aa21.08■□□□□ 0.97
VEGFA-206ENST00000372077 TPM2P07951 284 aa21.08■□□□□ 0.97
VEGFA-206ENST00000372077 PPIL2Q13356 520 aa21.08■□□□□ 0.97
VEGFA-206ENST00000372077 BLIDQ8IZY5 108 aa21.08■□□□□ 0.97
VEGFA-206ENST00000372077 KIFC2Q96AC6 838 aa21.08■□□□□ 0.97
VEGFA-206ENST00000372077 TMOD4Q9NZQ9 345 aa21.08■□□□□ 0.97
VEGFA-206ENST00000372077 PTPRFP10586 1907 aa21.08■□□□□ 0.96
VEGFA-206ENST00000372077 ADAMTS3O15072 1205 aa21.08■□□□□ 0.96
VEGFA-206ENST00000372077 UBE2HP62256 183 aa21.08■□□□□ 0.96
VEGFA-206ENST00000372077 PRPF38AQ8NAV1 312 aaKnown RBP21.08■□□□□ 0.96
VEGFA-206ENST00000372077 ZNF396Q96N95 335 aaPredicted RBP21.08■□□□□ 0.96
VEGFA-206ENST00000372077 SLF1Q9BQI6 1058 aa21.08■□□□□ 0.96
VEGFA-206ENST00000372077 KCNH4Q9UQ05 1017 aa21.08■□□□□ 0.96
VEGFA-206ENST00000372077 SMCO2A6NFE2 343 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms