RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 NFS1Q9Y697 457 aa13.05□□□□□ -0.32
SMARCA1-201ENST00000371121 KLRC4O43908 158 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 PPP1R37O75864 691 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 PAK1Q13153 545 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 NEDD9Q14511 834 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 ACCSLQ4AC99 568 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 OTUD6BQ8N6M0 293 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 DUSP9Q99956 384 aaKnown RBP13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 TLR10Q9BXR5 811 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 ARHGAP20Q9P2F6 1191 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 TPX2Q9ULW0 747 aaKnown RBP13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 A0A1W2PQC6 194 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 SATB1Q01826 763 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 TBC1D8BQ0IIM8 1120 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 FILIP1LQ4L180 1135 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 RRAGBQ5VZM2 374 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 ALS2CLQ60I27 953 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 KCPQ6ZWJ8 1503 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 B4DLN1 442 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 MOCS3O95396 460 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 GCP02774 474 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 EPHB4P54760 987 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 HLFQ16534 295 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 CYB5D1Q6P9G0 228 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 ADSSL1Q8N142 457 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 VGLL2Q8N8G2 317 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 SGSM3Q96HU1 749 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 SH2D4AQ9H788 454 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 JADE2Q9NQC1 790 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 TBC1D2BQ9UPU7 963 aa13.04□□□□□ -0.32
SMARCA1-201ENST00000371121 SOS2Q07890 1332 aaPredicted RBP13.03□□□□□ -0.32
SMARCA1-201ENST00000371121 CKAP4Q07065 602 aaKnown RBP13.03□□□□□ -0.32
SMARCA1-201ENST00000371121 IFT88Q13099 833 aa13.03□□□□□ -0.32
SMARCA1-201ENST00000371121 TRIM29Q14134 588 aa13.03□□□□□ -0.32
SMARCA1-201ENST00000371121 ZNF658Q5TYW1 1059 aaPredicted RBP13.03□□□□□ -0.32
SMARCA1-201ENST00000371121 ZNF532Q9HCE3 1301 aa13.03□□□□□ -0.32
SMARCA1-201ENST00000371121 FAM107AO95990 144 aa13.03□□□□□ -0.32
SMARCA1-201ENST00000371121 SNRPA1P09661 255 aaKnown RBP13.03□□□□□ -0.32
SMARCA1-201ENST00000371121 SRGNP10124 158 aa13.03□□□□□ -0.32
SMARCA1-201ENST00000371121 GCFC2P16383 781 aaKnown RBP13.03□□□□□ -0.32
SMARCA1-201ENST00000371121 UAP1Q16222 522 aaPredicted RBP13.03□□□□□ -0.32
SMARCA1-201ENST00000371121 EMBQ6PCB8 327 aa13.03□□□□□ -0.32
SMARCA1-201ENST00000371121 SYNE4Q8N205 404 aa13.03□□□□□ -0.32
SMARCA1-201ENST00000371121 CYFIP2Q96F07 1278 aa13.03□□□□□ -0.32
SMARCA1-201ENST00000371121 CNOT8Q9UFF9 292 aaKnown RBP13.03□□□□□ -0.32
SMARCA1-201ENST00000371121 PHF8Q9UPP1 1060 aa13.03□□□□□ -0.32
SMARCA1-201ENST00000371121 DCDC2CA8MYV0 355 aa13.02□□□□□ -0.32
SMARCA1-201ENST00000371121 TRHP20396 242 aaPredicted RBP13.02□□□□□ -0.32
SMARCA1-201ENST00000371121 MDH1P40925 334 aaKnown RBP13.02□□□□□ -0.32
SMARCA1-201ENST00000371121 MATR3P43243 847 aaKnown RBP eCLIP13.02□□□□□ -0.322e-7■■■□□ 19.2
SMARCA1-201ENST00000371121 CEBPAP49715 358 aaPredicted RBP13.02□□□□□ -0.32
SMARCA1-201ENST00000371121 PLCB4Q15147 1175 aa13.02□□□□□ -0.32
SMARCA1-201ENST00000371121 B4GALNT4Q76KP1 1039 aa13.02□□□□□ -0.32
SMARCA1-201ENST00000371121 IQCA1Q86XH1 822 aa13.02□□□□□ -0.32
SMARCA1-201ENST00000371121 CD302Q8IX05 232 aa13.02□□□□□ -0.32
SMARCA1-201ENST00000371121 C4orf32Q8N8J7 132 aa13.02□□□□□ -0.32
SMARCA1-201ENST00000371121 HAUS2Q9NVX0 235 aa13.02□□□□□ -0.32
SMARCA1-201ENST00000371121 NFU1Q9UMS0 254 aa13.02□□□□□ -0.32
SMARCA1-201ENST00000371121 SLC12A7Q9Y666 1083 aa13.02□□□□□ -0.32
SMARCA1-201ENST00000371121 BAZ2BQ9UIF8 2168 aaKnown RBP13.02□□□□□ -0.32
SMARCA1-201ENST00000371121 BACH1O14867 736 aa13.02□□□□□ -0.32
SMARCA1-201ENST00000371121 CYP27B1O15528 508 aa13.02□□□□□ -0.32
SMARCA1-201ENST00000371121 SKAP2O75563 359 aaPredicted RBP13.02□□□□□ -0.32
SMARCA1-201ENST00000371121 LCA5LO95447 670 aa13.02□□□□□ -0.32
SMARCA1-201ENST00000371121 TTI2Q6NXR4 508 aa13.02□□□□□ -0.32
SMARCA1-201ENST00000371121 GPIHBP1Q8IV16 184 aa13.02□□□□□ -0.32
SMARCA1-201ENST00000371121 MTMR8Q96EF0 704 aa13.02□□□□□ -0.32
SMARCA1-201ENST00000371121 CCDC43Q96MW1 224 aaKnown RBP13.02□□□□□ -0.32
SMARCA1-201ENST00000371121 LUC7L2Q9Y383 392 aaKnown RBP13.02□□□□□ -0.32
SMARCA1-201ENST00000371121 MYH3P11055 1940 aa13.02□□□□□ -0.33
SMARCA1-201ENST00000371121 PRKAB2O43741 272 aa13.02□□□□□ -0.33
SMARCA1-201ENST00000371121 PRLRP16471 622 aa13.02□□□□□ -0.33
SMARCA1-201ENST00000371121 IBSPP21815 317 aaPredicted RBP13.02□□□□□ -0.33
SMARCA1-201ENST00000371121 CCNHP51946 323 aaPredicted RBP13.02□□□□□ -0.33
SMARCA1-201ENST00000371121 ATP2C1P98194 919 aaPredicted RBP13.02□□□□□ -0.33
SMARCA1-201ENST00000371121 ANKRD20A8PQ5CZ79 823 aa13.02□□□□□ -0.33
SMARCA1-201ENST00000371121 CCDC85AQ96PX6 553 aaPredicted RBP13.02□□□□□ -0.33
SMARCA1-201ENST00000371121 TACO1Q9BSH4 297 aaKnown RBP13.02□□□□□ -0.33
SMARCA1-201ENST00000371121 ESF1Q9H501 851 aaKnown RBP13.02□□□□□ -0.33
SMARCA1-201ENST00000371121 GGA2Q9UJY4 613 aa13.02□□□□□ -0.33
SMARCA1-201ENST00000371121 ABCC12Q96J65 1359 aa13.02□□□□□ -0.33
SMARCA1-201ENST00000371121 ADAMTSL3P82987 1691 aa13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 NR1D1P20393 614 aa13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 VAV2P52735 878 aa13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 ZNF174Q15697 407 aa13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 KLHDC7AQ5VTJ3 777 aa13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 NFXL1Q6ZNB6 911 aa13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 FNBP4Q8N3X1 1017 aaPredicted RBP13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 MREGQ8N565 214 aa13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 CASKIN2Q8WXE0 1202 aa13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 ODF2LQ9ULJ1 636 aa13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 EME2A4GXA9 379 aaPredicted RBP13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 BHMG1C9JSJ3 638 aaPredicted RBP13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 PTGDRQ13258 359 aa13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 EGFL6Q8IUX8 553 aa13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 RUBCNQ92622 972 aa13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 LEMD3Q9Y2U8 911 aa13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 BAZ2AQ9UIF9 1905 aaKnown RBP13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 GSG1L2A8MUP6 293 aa13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 KRT86O43790 486 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms