RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 ADGRL2O95490 1459 aa13.93□□□□□ -0.18
GPC4-201ENST00000370828 PDHA1P08559 390 aa13.93□□□□□ -0.18
GPC4-201ENST00000370828 MTF1Q14872 753 aa13.93□□□□□ -0.18
GPC4-201ENST00000370828 METTL22Q9BUU2 404 aaPredicted RBP13.93□□□□□ -0.18
GPC4-201ENST00000370828 GJB4Q9NTQ9 266 aa13.93□□□□□ -0.18
GPC4-201ENST00000370828 HDAC9Q9UKV0 1011 aa13.93□□□□□ -0.18
GPC4-201ENST00000370828 PPP1R9AQ9ULJ8 1098 aa13.93□□□□□ -0.18
GPC4-201ENST00000370828 N4BP1O75113 896 aaKnown RBP13.93□□□□□ -0.18
GPC4-201ENST00000370828 FGAP02671 866 aa13.93□□□□□ -0.18
GPC4-201ENST00000370828 CORO7P57737 925 aa13.93□□□□□ -0.18
GPC4-201ENST00000370828 HVCN1Q96D96 273 aa13.93□□□□□ -0.18
GPC4-201ENST00000370828 PLAAQ9Y263 795 aa13.93□□□□□ -0.18
GPC4-201ENST00000370828 UNC13AQ9UPW8 1703 aa13.93□□□□□ -0.18
GPC4-201ENST00000370828 DUOX2Q9NRD8 1548 aa13.93□□□□□ -0.18
GPC4-201ENST00000370828 GCKRQ14397 625 aa13.93□□□□□ -0.18
GPC4-201ENST00000370828 SNX29Q8TEQ0 813 aa13.93□□□□□ -0.18
GPC4-201ENST00000370828 ADGRG1Q9Y653 693 aa13.93□□□□□ -0.18
GPC4-201ENST00000370828 ABCC1P33527 1531 aa13.93□□□□□ -0.18
GPC4-201ENST00000370828 H0Y3Z8 333 aa13.92□□□□□ -0.18
GPC4-201ENST00000370828 IQCB1Q15051 598 aa13.92□□□□□ -0.18
GPC4-201ENST00000370828 COG1Q8WTW3 980 aa13.92□□□□□ -0.18
GPC4-201ENST00000370828 CNOT6LQ96LI5 555 aaKnown RBP13.92□□□□□ -0.18
GPC4-201ENST00000370828 FHOD1Q9Y613 1164 aa13.92□□□□□ -0.18
GPC4-201ENST00000370828 SYCP2Q9BX26 1530 aa13.92□□□□□ -0.18
GPC4-201ENST00000370828 DNMT1P26358 1616 aaKnown RBP13.92□□□□□ -0.18
GPC4-201ENST00000370828 PLTPP55058 493 aa13.92□□□□□ -0.18
GPC4-201ENST00000370828 AIFM3Q96NN9 605 aa13.92□□□□□ -0.18
GPC4-201ENST00000370828 NHEJ1Q9H9Q4 299 aaPredicted RBP13.92□□□□□ -0.18
GPC4-201ENST00000370828 SUGCTQ9HAC7 445 aa13.92□□□□□ -0.18
GPC4-201ENST00000370828 GAS8O95995 478 aa13.92□□□□□ -0.18
GPC4-201ENST00000370828 LDHCP07864 332 aa13.92□□□□□ -0.18
GPC4-201ENST00000370828 SLC20A2Q08357 652 aa13.92□□□□□ -0.18
GPC4-201ENST00000370828 ARHGEF25Q86VW2 580 aa13.92□□□□□ -0.18
GPC4-201ENST00000370828 NLRP14Q86W24 1093 aa13.92□□□□□ -0.18
GPC4-201ENST00000370828 TXNDC16Q9P2K2 825 aa13.92□□□□□ -0.18
GPC4-201ENST00000370828 HNRNPH1P31943 449 aaKnown RBP13.92□□□□□ -0.18
GPC4-201ENST00000370828 PTGDRQ13258 359 aa13.92□□□□□ -0.18
GPC4-201ENST00000370828 ACBD5Q5T8D3 534 aaPredicted RBP13.92□□□□□ -0.18
GPC4-201ENST00000370828 I3L4J1 428 aa13.91□□□□□ -0.18
GPC4-201ENST00000370828 MEFVO15553 781 aaPredicted RBP13.91□□□□□ -0.18
GPC4-201ENST00000370828 RNMTO43148 476 aaKnown RBP13.91□□□□□ -0.18
GPC4-201ENST00000370828 GUCY1A3Q02108 690 aa13.91□□□□□ -0.18
GPC4-201ENST00000370828 FMR1NBQ8N0W7 255 aaPredicted RBP13.91□□□□□ -0.18
GPC4-201ENST00000370828 DPF2Q92785 391 aa13.91□□□□□ -0.18
GPC4-201ENST00000370828 SLC39A2Q9NP94 309 aa13.91□□□□□ -0.18
GPC4-201ENST00000370828 ZNF518AQ6AHZ1 1483 aa13.91□□□□□ -0.18
GPC4-201ENST00000370828 THAP12O43422 761 aa13.91□□□□□ -0.18
GPC4-201ENST00000370828 USP14P54578 494 aa13.91□□□□□ -0.18
GPC4-201ENST00000370828 ARHGAP44Q17R89 818 aa13.91□□□□□ -0.18
GPC4-201ENST00000370828 ZNF654Q8IZM8 581 aa13.91□□□□□ -0.18
GPC4-201ENST00000370828 PI4K2BQ8TCG2 481 aa13.91□□□□□ -0.18
GPC4-201ENST00000370828 CCHCR1Q8TD31 782 aa13.91□□□□□ -0.18
GPC4-201ENST00000370828 TMED1Q13445 227 aa13.91□□□□□ -0.18
GPC4-201ENST00000370828 NYAP1Q6ZVC0 841 aa13.91□□□□□ -0.18
GPC4-201ENST00000370828 FAM89AQ96GI7 184 aa13.91□□□□□ -0.18
GPC4-201ENST00000370828 UTP6Q9NYH9 597 aaKnown RBP13.91□□□□□ -0.18
GPC4-201ENST00000370828 PSD3Q9NYI0 1048 aa13.91□□□□□ -0.18
GPC4-201ENST00000370828 ZNF532Q9HCE3 1301 aa13.91□□□□□ -0.18
GPC4-201ENST00000370828 ESYT3A0FGR9 886 aa13.91□□□□□ -0.18
GPC4-201ENST00000370828 SKIP12755 728 aa13.91□□□□□ -0.18
GPC4-201ENST00000370828 KRT5P13647 590 aa13.91□□□□□ -0.18
GPC4-201ENST00000370828 POGZQ7Z3K3 1410 aa13.91□□□□□ -0.18
GPC4-201ENST00000370828 KDM6BO15054 1643 aa13.9□□□□□ -0.18
GPC4-201ENST00000370828 ZRANB2O95218 330 aaKnown RBP eCLIP13.9□□□□□ -0.18
GPC4-201ENST00000370828 TOB2Q14106 344 aaPredicted RBP13.9□□□□□ -0.18
GPC4-201ENST00000370828 ZNF449Q6P9G9 518 aa13.9□□□□□ -0.18
GPC4-201ENST00000370828 CNOT10Q9H9A5 744 aaKnown RBP13.9□□□□□ -0.18
GPC4-201ENST00000370828 ZNF652Q9Y2D9 606 aa13.9□□□□□ -0.18
GPC4-201ENST00000370828 GMNCA6NCL1 334 aa13.9□□□□□ -0.18
GPC4-201ENST00000370828 H2AFZP0C0S5 128 aa13.9□□□□□ -0.18
GPC4-201ENST00000370828 KRT31Q15323 416 aa13.9□□□□□ -0.18
GPC4-201ENST00000370828 H2AFVQ71UI9 128 aa13.9□□□□□ -0.18
GPC4-201ENST00000370828 USP37Q86T82 979 aa13.9□□□□□ -0.18
GPC4-201ENST00000370828 LRRC8CQ8TDW0 803 aa13.9□□□□□ -0.18
GPC4-201ENST00000370828 FBXO41Q8TF61 875 aa13.9□□□□□ -0.18
GPC4-201ENST00000370828 WDR7Q9Y4E6 1490 aa13.9□□□□□ -0.18
GPC4-201ENST00000370828 MYO1FO00160 1098 aa13.9□□□□□ -0.18
GPC4-201ENST00000370828 EIF4A3P38919 411 aaKnown RBP13.9□□□□□ -0.18
GPC4-201ENST00000370828 BEND6Q5SZJ8 279 aaPredicted RBP13.9□□□□□ -0.18
GPC4-201ENST00000370828 PPP1R21Q6ZMI0 780 aa13.9□□□□□ -0.18
GPC4-201ENST00000370828 TTC16Q8NEE8 873 aa13.9□□□□□ -0.18
GPC4-201ENST00000370828 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.9□□□□□ -0.18
GPC4-201ENST00000370828 HAUS7Q99871 368 aa13.9□□□□□ -0.18
GPC4-201ENST00000370828 NUF2Q9BZD4 464 aa13.9□□□□□ -0.18
GPC4-201ENST00000370828 SH2D3CQ8N5H7 860 aa13.9□□□□□ -0.18
GPC4-201ENST00000370828 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.9□□□□□ -0.18
GPC4-201ENST00000370828 USTQ9Y2C2 406 aa13.9□□□□□ -0.18
GPC4-201ENST00000370828 HOXB7P09629 217 aa13.89□□□□□ -0.19
GPC4-201ENST00000370828 GDAP1Q8TB36 358 aa13.89□□□□□ -0.19
GPC4-201ENST00000370828 RPAP1Q9BWH6 1393 aaPredicted RBP13.89□□□□□ -0.19
GPC4-201ENST00000370828 ADCY8P40145 1251 aa13.89□□□□□ -0.19
GPC4-201ENST00000370828 PPP4R3AQ6IN85 833 aa13.89□□□□□ -0.19
GPC4-201ENST00000370828 TMED8Q6PL24 325 aaPredicted RBP13.89□□□□□ -0.19
GPC4-201ENST00000370828 HAUS1Q96CS2 278 aa13.89□□□□□ -0.19
GPC4-201ENST00000370828 GPHNQ9NQX3 736 aaPredicted RBP13.89□□□□□ -0.19
GPC4-201ENST00000370828 INTUQ9ULD6 942 aa13.89□□□□□ -0.19
GPC4-201ENST00000370828 DAAM1Q9Y4D1 1078 aa13.89□□□□□ -0.19
GPC4-201ENST00000370828 TEX33O43247 280 aa13.89□□□□□ -0.19
GPC4-201ENST00000370828 PPP2R5EQ16537 467 aa13.89□□□□□ -0.19
GPC4-201ENST00000370828 NUGGCQ68CJ6 796 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms