RNA–Protein interactions for RNA: ENST00000369510.8

VANGL1-204, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VANGL1, Length 8,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-204ENST00000369510 NBPF20Q3BBV1 942 aa9.47□□□□□ -0.89
VANGL1-204ENST00000369510 PARP10Q53GL7 1025 aa9.47□□□□□ -0.89
VANGL1-204ENST00000369510 ZSWIM4Q9H7M6 989 aa9.47□□□□□ -0.89
VANGL1-204ENST00000369510 PIK3CDO00329 1044 aa9.47□□□□□ -0.89
VANGL1-204ENST00000369510 IRX1P78414 480 aaPredicted RBP9.47□□□□□ -0.89
VANGL1-204ENST00000369510 KLHL24Q6TFL4 600 aa9.47□□□□□ -0.89
VANGL1-204ENST00000369510 POMGNT1Q8WZA1 660 aa9.47□□□□□ -0.89
VANGL1-204ENST00000369510 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.47□□□□□ -0.895e-6■■■□□ 16.3
VANGL1-204ENST00000369510 CABP1Q9NZU7 370 aa9.47□□□□□ -0.89
VANGL1-204ENST00000369510 KIF17Q9P2E2 1029 aa9.47□□□□□ -0.89
VANGL1-204ENST00000369510 CCDC169A6NNP5 214 aa9.47□□□□□ -0.89
VANGL1-204ENST00000369510 S100A1P23297 94 aa9.47□□□□□ -0.89
VANGL1-204ENST00000369510 PPP2R3AQ06190 1150 aa9.47□□□□□ -0.89
VANGL1-204ENST00000369510 ELMSAN1Q6PJG2 1045 aa9.47□□□□□ -0.89
VANGL1-204ENST00000369510 FAM178BQ8IXR5 827 aa9.47□□□□□ -0.89
VANGL1-204ENST00000369510 FBXO18Q8NFZ0 1043 aa9.47□□□□□ -0.89
VANGL1-204ENST00000369510 TMOD3Q9NYL9 352 aa9.47□□□□□ -0.89
VANGL1-204ENST00000369510 RAPGEF3O95398 923 aa9.46□□□□□ -0.89
VANGL1-204ENST00000369510 MSH2P43246 934 aa9.46□□□□□ -0.89
VANGL1-204ENST00000369510 AKNAD1Q5T1N1 836 aa9.46□□□□□ -0.89
VANGL1-204ENST00000369510 RNF169Q8NCN4 708 aa9.46□□□□□ -0.89
VANGL1-204ENST00000369510 PRDM5Q9NQX1 630 aaPredicted RBP9.46□□□□□ -0.89
VANGL1-204ENST00000369510 IDH3BO43837 385 aa9.46□□□□□ -0.89
VANGL1-204ENST00000369510 ZFP42Q96MM3 310 aa9.46□□□□□ -0.89
VANGL1-204ENST00000369510 NAPGQ99747 312 aaPredicted RBP9.46□□□□□ -0.89
VANGL1-204ENST00000369510 IL1RAPL2Q9NP60 686 aa9.46□□□□□ -0.89
VANGL1-204ENST00000369510 SNAPC4Q5SXM2 1469 aa9.46□□□□□ -0.89
VANGL1-204ENST00000369510 KIAA1107Q9UPP5 1409 aa9.46□□□□□ -0.89
VANGL1-204ENST00000369510 ASZ1Q8WWH4 475 aa9.46□□□□□ -0.89
VANGL1-204ENST00000369510 MRPS27Q92552 414 aaKnown RBP9.46□□□□□ -0.89
VANGL1-204ENST00000369510 GPBP1L1Q9HC44 474 aaPredicted RBP9.46□□□□□ -0.89
VANGL1-204ENST00000369510 ASIC3Q9UHC3 531 aa9.46□□□□□ -0.89
VANGL1-204ENST00000369510 TRIM27P14373 513 aa9.46□□□□□ -0.9
VANGL1-204ENST00000369510 TSTA3Q13630 321 aaPredicted RBP9.46□□□□□ -0.9
VANGL1-204ENST00000369510 KLC3Q6P597 504 aa9.46□□□□□ -0.9
VANGL1-204ENST00000369510 VIPAS39Q9H9C1 493 aa9.46□□□□□ -0.9
VANGL1-204ENST00000369510 CFTRP13569 1480 aa9.46□□□□□ -0.9
VANGL1-204ENST00000369510 TROQ12816 1431 aaPredicted RBP9.46□□□□□ -0.9
VANGL1-204ENST00000369510 GOLGA5Q8TBA6 731 aa9.46□□□□□ -0.9
VANGL1-204ENST00000369510 CNOT10Q9H9A5 744 aaKnown RBP9.46□□□□□ -0.9
VANGL1-204ENST00000369510 RNF14Q9UBS8 474 aa9.46□□□□□ -0.9
VANGL1-204ENST00000369510 SYT1P21579 422 aa9.46□□□□□ -0.9
VANGL1-204ENST00000369510 CCT7Q99832 543 aa9.46□□□□□ -0.9
VANGL1-204ENST00000369510 SH3GL1Q99961 368 aa9.46□□□□□ -0.9
VANGL1-204ENST00000369510 NUP85Q9BW27 656 aa9.46□□□□□ -0.9
VANGL1-204ENST00000369510 GDPD2Q9HCC8 539 aa9.46□□□□□ -0.9
VANGL1-204ENST00000369510 SLC4A7Q9Y6M7 1214 aa9.46□□□□□ -0.9
VANGL1-204ENST00000369510 GLRX3O76003 335 aaKnown RBP9.45□□□□□ -0.9
VANGL1-204ENST00000369510 SYKP43405 635 aa9.45□□□□□ -0.9
VANGL1-204ENST00000369510 FAM200AQ8TCP9 573 aa9.45□□□□□ -0.9
VANGL1-204ENST00000369510 PPP1R13BQ96KQ4 1090 aa9.45□□□□□ -0.9
VANGL1-204ENST00000369510 CLCN1P35523 988 aa9.45□□□□□ -0.9
VANGL1-204ENST00000369510 PURAQ00577 322 aaKnown RBP9.45□□□□□ -0.9
VANGL1-204ENST00000369510 KRT17Q04695 432 aa9.45□□□□□ -0.9
VANGL1-204ENST00000369510 HPS5Q9UPZ3 1129 aa9.45□□□□□ -0.9
VANGL1-204ENST00000369510 CCDC141Q6ZP82 1450 aa9.45□□□□□ -0.9
VANGL1-204ENST00000369510 KIF14Q15058 1648 aa9.45□□□□□ -0.9
VANGL1-204ENST00000369510 PRR23AA6NEV1 266 aa9.45□□□□□ -0.9
VANGL1-204ENST00000369510 BCRP11274 1271 aa9.45□□□□□ -0.9
VANGL1-204ENST00000369510 SLC9C1Q4G0N8 1177 aa9.45□□□□□ -0.9
VANGL1-204ENST00000369510 ATP8B4Q8TF62 1192 aa9.45□□□□□ -0.9
VANGL1-204ENST00000369510 PIK3R5Q8WYR1 880 aa9.45□□□□□ -0.9
VANGL1-204ENST00000369510 LZTS1Q9Y250 596 aa9.45□□□□□ -0.9
VANGL1-204ENST00000369510 STK38LQ9Y2H1 464 aa9.45□□□□□ -0.9
VANGL1-204ENST00000369510 CAPN7Q9Y6W3 813 aa9.45□□□□□ -0.9
VANGL1-204ENST00000369510 RALBP11234 206 aa9.45□□□□□ -0.9
VANGL1-204ENST00000369510 EIF2S3P41091 472 aaKnown RBP9.45□□□□□ -0.9
VANGL1-204ENST00000369510 CHMP4BP1P59074 171 aa9.45□□□□□ -0.9
VANGL1-204ENST00000369510 KLHL12Q53G59 568 aa9.45□□□□□ -0.9
VANGL1-204ENST00000369510 LRRC8CQ8TDW0 803 aa9.45□□□□□ -0.9
VANGL1-204ENST00000369510 SOX13Q9UN79 622 aa9.45□□□□□ -0.9
VANGL1-204ENST00000369510 THUMPD2Q9BTF0 503 aaKnown RBP9.45□□□□□ -0.9
VANGL1-204ENST00000369510 A0A087WUV0 522 aaPredicted RBP9.45□□□□□ -0.9
VANGL1-204ENST00000369510 BRD3Q15059 726 aa9.45□□□□□ -0.9
VANGL1-204ENST00000369510 GNAT3A8MTJ3 354 aa9.45□□□□□ -0.9
VANGL1-204ENST00000369510 ARID5AQ03989 594 aa9.45□□□□□ -0.9
VANGL1-204ENST00000369510 NSMCE4AQ9NXX6 385 aa9.45□□□□□ -0.9
VANGL1-204ENST00000369510 NR1I2O75469 434 aa9.44□□□□□ -0.9
VANGL1-204ENST00000369510 IFIT1P09914 478 aaKnown RBP9.44□□□□□ -0.9
VANGL1-204ENST00000369510 CCDC166P0CW27 439 aa9.44□□□□□ -0.9
VANGL1-204ENST00000369510 TFAP4Q01664 338 aa9.44□□□□□ -0.9
VANGL1-204ENST00000369510 GOLGA8FQ08AF8 430 aa9.44□□□□□ -0.9
VANGL1-204ENST00000369510 TADA2BQ86TJ2 420 aa9.44□□□□□ -0.9
VANGL1-204ENST00000369510 WARS2Q9UGM6 360 aaKnown RBP9.44□□□□□ -0.9
VANGL1-204ENST00000369510 TBC1D8O95759 1140 aa9.44□□□□□ -0.9
VANGL1-204ENST00000369510 CLTAP09496 248 aa9.44□□□□□ -0.9
VANGL1-204ENST00000369510 RSAD2Q8WXG1 361 aa9.44□□□□□ -0.9
VANGL1-204ENST00000369510 FHDC1Q9C0D6 1143 aaPredicted RBP9.44□□□□□ -0.9
VANGL1-204ENST00000369510 GID8Q9NWU2 228 aa9.44□□□□□ -0.9
VANGL1-204ENST00000369510 TRIM33Q9UPN9 1127 aa9.44□□□□□ -0.9
VANGL1-204ENST00000369510 DIAPH2O60879 1101 aa9.44□□□□□ -0.9
VANGL1-204ENST00000369510 SMNDC1O75940 238 aaKnown RBP eCLIP9.44□□□□□ -0.9
VANGL1-204ENST00000369510 PRPF6O94906 941 aaKnown RBP9.44□□□□□ -0.9
VANGL1-204ENST00000369510 RWDD2BP57060 319 aa9.44□□□□□ -0.9
VANGL1-204ENST00000369510 AP1B1Q10567 949 aa9.44□□□□□ -0.9
VANGL1-204ENST00000369510 EPC1Q9H2F5 836 aa9.44□□□□□ -0.9
VANGL1-204ENST00000369510 SUN2Q9UH99 717 aa9.44□□□□□ -0.9
VANGL1-204ENST00000369510 DNMBPQ6XZF7 1577 aa9.44□□□□□ -0.9
VANGL1-204ENST00000369510 ANGPT2O15123 496 aa9.44□□□□□ -0.9
VANGL1-204ENST00000369510 ART3Q13508 389 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms