RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 GMPSP49915 693 aaPredicted RBP12.1□□□□□ -0.47
TPM3-212ENST00000368533 NAPAP54920 295 aa12.1□□□□□ -0.47
TPM3-212ENST00000368533 NPY5RQ15761 445 aa12.1□□□□□ -0.47
TPM3-212ENST00000368533 PFKFB3Q16875 520 aaPredicted RBP12.1□□□□□ -0.47
TPM3-212ENST00000368533 MICALL2Q8IY33 904 aa12.1□□□□□ -0.47
TPM3-212ENST00000368533 GMLQ99445 158 aa12.1□□□□□ -0.47
TPM3-212ENST00000368533 SKILP12757 684 aa12.1□□□□□ -0.47
TPM3-212ENST00000368533 ICA1Q05084 483 aa12.1□□□□□ -0.47
TPM3-212ENST00000368533 ABCB5Q2M3G0 1257 aa12.1□□□□□ -0.47
TPM3-212ENST00000368533 ENGASEQ8NFI3 743 aa12.1□□□□□ -0.47
TPM3-212ENST00000368533 MAP3K14Q99558 947 aa12.1□□□□□ -0.47
TPM3-212ENST00000368533 MYOZ2Q9NPC6 264 aa12.1□□□□□ -0.47
TPM3-212ENST00000368533 POLR3EQ9NVU0 708 aa12.1□□□□□ -0.47
TPM3-212ENST00000368533 ZNF446Q9NWS9 450 aa12.1□□□□□ -0.47
TPM3-212ENST00000368533 ZNF541Q9H0D2 1346 aa12.1□□□□□ -0.47
TPM3-212ENST00000368533 MYH8P13535 1937 aa12.1□□□□□ -0.47
TPM3-212ENST00000368533 PALM3A6NDB9 673 aaPredicted RBP12.09□□□□□ -0.47
TPM3-212ENST00000368533 USP17L10C9JJH3 530 aa12.09□□□□□ -0.47
TPM3-212ENST00000368533 PFKFB1P16118 471 aa12.09□□□□□ -0.47
TPM3-212ENST00000368533 JAKMIP3Q5VZ66 844 aa12.09□□□□□ -0.47
TPM3-212ENST00000368533 TMED8Q6PL24 325 aaPredicted RBP12.09□□□□□ -0.47
TPM3-212ENST00000368533 GLIS2Q9BZE0 524 aaPredicted RBP12.09□□□□□ -0.47
TPM3-212ENST00000368533 TMEM260Q9NX78 707 aa12.09□□□□□ -0.47
TPM3-212ENST00000368533 QSER1Q2KHR3 1735 aa12.09□□□□□ -0.47
TPM3-212ENST00000368533 ZNF202O95125 648 aa12.09□□□□□ -0.47
TPM3-212ENST00000368533 SLC20A2Q08357 652 aa12.09□□□□□ -0.47
TPM3-212ENST00000368533 SLC39A14Q15043 492 aa12.09□□□□□ -0.47
TPM3-212ENST00000368533 PTPAQ15257 358 aa12.09□□□□□ -0.47
TPM3-212ENST00000368533 INF2Q27J81 1249 aa12.09□□□□□ -0.47
TPM3-212ENST00000368533 DPCR1Q3MIW9 517 aa12.09□□□□□ -0.47
TPM3-212ENST00000368533 SHC4Q6S5L8 630 aa12.09□□□□□ -0.47
TPM3-212ENST00000368533 C10orf67Q8IYJ2 551 aa12.09□□□□□ -0.47
TPM3-212ENST00000368533 GRAMD1CQ8IYS0 662 aa12.09□□□□□ -0.47
TPM3-212ENST00000368533 FMR1NBQ8N0W7 255 aaPredicted RBP12.09□□□□□ -0.47
TPM3-212ENST00000368533 ACER1Q8TDN7 264 aa12.09□□□□□ -0.47
TPM3-212ENST00000368533 IDI2Q9BXS1 227 aa12.09□□□□□ -0.47
TPM3-212ENST00000368533 BIN2Q9UBW5 565 aaPredicted RBP12.09□□□□□ -0.47
TPM3-212ENST00000368533 FOXN1O15353 648 aa12.09□□□□□ -0.47
TPM3-212ENST00000368533 AXDND1Q5T1B0 1012 aaPredicted RBP12.09□□□□□ -0.47
TPM3-212ENST00000368533 TCP11L1Q9NUJ3 509 aa12.09□□□□□ -0.47
TPM3-212ENST00000368533 SEC63Q9UGP8 760 aaKnown RBP12.09□□□□□ -0.47
TPM3-212ENST00000368533 MYH15Q9Y2K3 1946 aa12.08□□□□□ -0.48
TPM3-212ENST00000368533 SLC1A4P43007 532 aa12.08□□□□□ -0.48
TPM3-212ENST00000368533 LRRC8AQ8IWT6 810 aa12.08□□□□□ -0.48
TPM3-212ENST00000368533 DHX40Q8IX18 779 aaKnown RBP12.08□□□□□ -0.48
TPM3-212ENST00000368533 ZNF397Q8NF99 534 aaPredicted RBP12.08□□□□□ -0.48
TPM3-212ENST00000368533 STAMQ92783 540 aa12.08□□□□□ -0.48
TPM3-212ENST00000368533 KIAA1468Q9P260 1216 aa12.08□□□□□ -0.48
TPM3-212ENST00000368533 NID2Q14112 1375 aa12.08□□□□□ -0.48
TPM3-212ENST00000368533 LOC102724159A0A0B4J2E5 919 aa12.08□□□□□ -0.48
TPM3-212ENST00000368533 A0A1W2PRG0 241 aa12.08□□□□□ -0.48
TPM3-212ENST00000368533 TPM4P67936 248 aa12.08□□□□□ -0.48
TPM3-212ENST00000368533 RASA3Q14644 834 aa12.08□□□□□ -0.48
TPM3-212ENST00000368533 PWP2Q15269 919 aaKnown RBP12.08□□□□□ -0.48
TPM3-212ENST00000368533 UBE2SQ16763 222 aa12.08□□□□□ -0.48
TPM3-212ENST00000368533 USH1GQ495M9 461 aa12.08□□□□□ -0.48
TPM3-212ENST00000368533 CEP135Q66GS9 1140 aa12.08□□□□□ -0.48
TPM3-212ENST00000368533 LRRN4CLQ8ND94 238 aa12.08□□□□□ -0.48
TPM3-212ENST00000368533 PLIN2Q99541 437 aa12.08□□□□□ -0.48
TPM3-212ENST00000368533 FOXP1Q9H334 677 aaPredicted RBP12.08□□□□□ -0.48
TPM3-212ENST00000368533 BRMS1Q9HCU9 246 aa12.08□□□□□ -0.48
TPM3-212ENST00000368533 SWAP70Q9UH65 585 aa12.08□□□□□ -0.48
TPM3-212ENST00000368533 LCMT1Q9UIC8 334 aa12.08□□□□□ -0.48
TPM3-212ENST00000368533 CNOT7Q9UIV1 285 aaKnown RBP12.08□□□□□ -0.48
TPM3-212ENST00000368533 CENPFP49454 3210 aa12.08□□□□□ -0.48
TPM3-212ENST00000368533 VWA3AA6NCI4 1184 aa12.07□□□□□ -0.48
TPM3-212ENST00000368533 YEATS4O95619 227 aa12.07□□□□□ -0.48
TPM3-212ENST00000368533 CASP1P29466 404 aa12.07□□□□□ -0.48
TPM3-212ENST00000368533 SIAH1Q8IUQ4 282 aa12.07□□□□□ -0.48
TPM3-212ENST00000368533 ADGRF4Q8IZF3 695 aa12.07□□□□□ -0.48
TPM3-212ENST00000368533 RRP36Q96EU6 259 aaKnown RBP12.07□□□□□ -0.48
TPM3-212ENST00000368533 DHX36Q9H2U1 1008 aaKnown RBP12.07□□□□□ -0.48
TPM3-212ENST00000368533 IFNKQ9P0W0 207 aa12.07□□□□□ -0.48
TPM3-212ENST00000368533 SMCO2A6NFE2 343 aa12.07□□□□□ -0.48
TPM3-212ENST00000368533 STXBP3O00186 592 aa12.07□□□□□ -0.48
TPM3-212ENST00000368533 MYO1BO43795 1136 aa12.07□□□□□ -0.48
TPM3-212ENST00000368533 LMOD1P29536 600 aaPredicted RBP12.07□□□□□ -0.48
TPM3-212ENST00000368533 RCAN1P53805 252 aa12.07□□□□□ -0.48
TPM3-212ENST00000368533 HDLBPQ00341 1268 aaKnown RBP12.07□□□□□ -0.48
TPM3-212ENST00000368533 PPP2R5BQ15173 497 aa12.07□□□□□ -0.48
TPM3-212ENST00000368533 SLFN13Q68D06 897 aa12.07□□□□□ -0.48
TPM3-212ENST00000368533 TMC6Q7Z403 805 aa12.07□□□□□ -0.48
TPM3-212ENST00000368533 TEX2Q8IWB9 1127 aa12.07□□□□□ -0.48
TPM3-212ENST00000368533 BLIDQ8IZY5 108 aa12.07□□□□□ -0.48
TPM3-212ENST00000368533 MRFAP1L1Q96HT8 127 aa12.07□□□□□ -0.48
TPM3-212ENST00000368533 EPSTI1Q96J88 318 aa12.07□□□□□ -0.48
TPM3-212ENST00000368533 CNTNAP1P78357 1384 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 A0A1W2PQ27 194 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 A0A1W2PQ64 194 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 A0A1W2PQD8 194 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 SYKP43405 635 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 SOGA3Q5TF21 947 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 ANKS1AQ92625 1134 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 GJA10Q969M2 543 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 CSRNP2Q9H175 543 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 ZCCHC17Q9NP64 241 aaKnown RBP12.06□□□□□ -0.48
TPM3-212ENST00000368533 TRIM75PA6NK02 468 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 PRR29P0C7W0 189 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 CYP2C19P33261 490 aa12.06□□□□□ -0.48
TPM3-212ENST00000368533 FKBP1AP62942 108 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms