RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 IL17RBQ9NRM6 502 aa19.01■□□□□ 0.63
CKS1B-202ENST00000368436 ANAPC4Q9UJX5 808 aa19.01■□□□□ 0.63
CKS1B-202ENST00000368436 ZHX1Q9UKY1 873 aaPredicted RBP19.01■□□□□ 0.63
CKS1B-202ENST00000368436 ZNF536O15090 1300 aa19■□□□□ 0.63
CKS1B-202ENST00000368436 ITGB8P26012 769 aa19■□□□□ 0.63
CKS1B-202ENST00000368436 CST5P28325 142 aaPredicted RBP19■□□□□ 0.63
CKS1B-202ENST00000368436 SLC1A4P43007 532 aa19■□□□□ 0.63
CKS1B-202ENST00000368436 NOVP48745 357 aa19■□□□□ 0.63
CKS1B-202ENST00000368436 CTDSPL2Q05D32 466 aa19■□□□□ 0.63
CKS1B-202ENST00000368436 KCNA10Q16322 511 aa19■□□□□ 0.63
CKS1B-202ENST00000368436 ANKRD33Q7Z3H0 272 aa19■□□□□ 0.63
CKS1B-202ENST00000368436 FAM133AQ8N9E0 248 aa19■□□□□ 0.63
CKS1B-202ENST00000368436 NUP133Q8WUM0 1156 aa19■□□□□ 0.63
CKS1B-202ENST00000368436 TOX2Q96NM4 488 aa19■□□□□ 0.63
CKS1B-202ENST00000368436 CRBNQ96SW2 442 aa19■□□□□ 0.63
CKS1B-202ENST00000368436 KATNBL1Q9H079 304 aa19■□□□□ 0.63
CKS1B-202ENST00000368436 TSPY2A6NKD2 308 aa18.99■□□□□ 0.63
CKS1B-202ENST00000368436 ADCY6O43306 1168 aa18.99■□□□□ 0.63
CKS1B-202ENST00000368436 FGRP09769 529 aa18.99■□□□□ 0.63
CKS1B-202ENST00000368436 MCCP23508 829 aa18.99■□□□□ 0.63
CKS1B-202ENST00000368436 PDE1AP54750 535 aa18.99■□□□□ 0.63
CKS1B-202ENST00000368436 HDAC1Q13547 482 aaPredicted RBP18.99■□□□□ 0.63
CKS1B-202ENST00000368436 ALX1Q15699 326 aa18.99■□□□□ 0.63
CKS1B-202ENST00000368436 CCDC144BQ3MJ40 725 aa18.99■□□□□ 0.63
CKS1B-202ENST00000368436 VPS53Q5VIR6 699 aa18.99■□□□□ 0.63
CKS1B-202ENST00000368436 RCSD1Q6JBY9 416 aa18.99■□□□□ 0.63
CKS1B-202ENST00000368436 ARMCX2Q7L311 632 aa18.99■□□□□ 0.63
CKS1B-202ENST00000368436 GUCD1Q96NT3 240 aa18.99■□□□□ 0.63
CKS1B-202ENST00000368436 UPF3AQ9H1J1 476 aaKnown RBP18.99■□□□□ 0.63
CKS1B-202ENST00000368436 ACAD9Q9H845 621 aa18.99■□□□□ 0.63
CKS1B-202ENST00000368436 STARD7Q9NQZ5 370 aa18.99■□□□□ 0.63
CKS1B-202ENST00000368436 HELLSQ9NRZ9 838 aa18.99■□□□□ 0.63
CKS1B-202ENST00000368436 ZBTB47Q9UFB7 747 aaPredicted RBP18.99■□□□□ 0.63
CKS1B-202ENST00000368436 STX8Q9UNK0 236 aa18.99■□□□□ 0.63
CKS1B-202ENST00000368436 MYADML2A6NDP7 307 aa18.98■□□□□ 0.63
CKS1B-202ENST00000368436 ORC4O43929 436 aa18.98■□□□□ 0.63
CKS1B-202ENST00000368436 NMT2O60551 498 aa18.98■□□□□ 0.63
CKS1B-202ENST00000368436 PQBP1O60828 265 aaKnown RBP18.98■□□□□ 0.63
CKS1B-202ENST00000368436 GJA9P57773 515 aa18.98■□□□□ 0.63
CKS1B-202ENST00000368436 CNTN2Q02246 1040 aa18.98■□□□□ 0.63
CKS1B-202ENST00000368436 FAAP100Q0VG06 881 aa18.98■□□□□ 0.63
CKS1B-202ENST00000368436 TKFCQ3LXA3 575 aa18.98■□□□□ 0.63
CKS1B-202ENST00000368436 TICAM2Q86XR7 235 aa18.98■□□□□ 0.63
CKS1B-202ENST00000368436 CCDC144CPQ8IYA2 1237 aa18.98■□□□□ 0.63
CKS1B-202ENST00000368436 AGBL1Q96MI9 1066 aa18.98■□□□□ 0.63
CKS1B-202ENST00000368436 A1CFQ9NQ94 594 aaKnown RBP18.98■□□□□ 0.63
CKS1B-202ENST00000368436 HOMER2Q9NSB8 354 aa18.98■□□□□ 0.63
CKS1B-202ENST00000368436 DLL1O00548 723 aa18.97■□□□□ 0.63
CKS1B-202ENST00000368436 RAG1P15918 1043 aa18.97■□□□□ 0.63
CKS1B-202ENST00000368436 NKX3-2P78367 333 aa18.97■□□□□ 0.63
CKS1B-202ENST00000368436 IRX5P78411 483 aaPredicted RBP18.97■□□□□ 0.63
CKS1B-202ENST00000368436 KCTD1Q719H9 257 aa18.97■□□□□ 0.63
CKS1B-202ENST00000368436 PCSK9Q8NBP7 692 aaKnown RBP18.97■□□□□ 0.63
CKS1B-202ENST00000368436 RNF146Q9NTX7 359 aa18.97■□□□□ 0.63
CKS1B-202ENST00000368436 TMEM39AQ9NV64 488 aa18.97■□□□□ 0.63
CKS1B-202ENST00000368436 PRR12Q9ULL5 1215 aa18.97■□□□□ 0.63
CKS1B-202ENST00000368436 ISY1Q9ULR0 285 aaKnown RBP18.97■□□□□ 0.63
CKS1B-202ENST00000368436 ELP1O95163 1332 aa18.97■□□□□ 0.63
CKS1B-202ENST00000368436 LCTP09848 1927 aa18.96■□□□□ 0.63
CKS1B-202ENST00000368436 SOWAHBA6NEL2 793 aa18.96■□□□□ 0.63
CKS1B-202ENST00000368436 DCDC2CA8MYV0 355 aa18.96■□□□□ 0.63
CKS1B-202ENST00000368436 RANBP6O60518 1105 aaKnown RBP18.96■□□□□ 0.63
CKS1B-202ENST00000368436 C6orf222P0C671 652 aaPredicted RBP18.96■□□□□ 0.63
CKS1B-202ENST00000368436 CDK7P50613 346 aa18.96■□□□□ 0.63
CKS1B-202ENST00000368436 EPHB4P54760 987 aa18.96■□□□□ 0.63
CKS1B-202ENST00000368436 SMAD3P84022 425 aaKnown RBP18.96■□□□□ 0.63
CKS1B-202ENST00000368436 IKQ13123 557 aaPredicted RBP18.96■□□□□ 0.63
CKS1B-202ENST00000368436 ZNF697Q5TEC3 545 aa18.96■□□□□ 0.63
CKS1B-202ENST00000368436 CHMP4CQ96CF2 233 aa18.96■□□□□ 0.63
CKS1B-202ENST00000368436 GLT1D1Q96MS3 346 aa18.96■□□□□ 0.63
CKS1B-202ENST00000368436 TRERF1Q96PN7 1200 aa18.96■□□□□ 0.63
CKS1B-202ENST00000368436 SPC25Q9HBM1 224 aa18.96■□□□□ 0.63
CKS1B-202ENST00000368436 LRRC37A2A6NM11 1700 aa18.96■□□□□ 0.63
CKS1B-202ENST00000368436 CTAGE5O15320 804 aa18.95■□□□□ 0.62
CKS1B-202ENST00000368436 ASGR1P07306 291 aa18.95■□□□□ 0.62
CKS1B-202ENST00000368436 MCMDC2Q4G0Z9 681 aa18.95■□□□□ 0.62
CKS1B-202ENST00000368436 FAM227BQ96M60 508 aa18.95■□□□□ 0.62
CKS1B-202ENST00000368436 ASB14A6NK59 587 aa18.94■□□□□ 0.62
CKS1B-202ENST00000368436 FGAP02671 866 aa18.94■□□□□ 0.62
CKS1B-202ENST00000368436 ALAS1P13196 640 aa18.94■□□□□ 0.62
CKS1B-202ENST00000368436 FPGSQ05932 587 aa18.94■□□□□ 0.62
CKS1B-202ENST00000368436 RASGRP2Q7LDG7 609 aa18.94■□□□□ 0.62
CKS1B-202ENST00000368436 DCAF4Q8WV16 495 aa18.94■□□□□ 0.62
CKS1B-202ENST00000368436 FAM161BQ96MY7 647 aa18.94■□□□□ 0.62
CKS1B-202ENST00000368436 TBX21Q9UL17 535 aa18.94■□□□□ 0.62
CKS1B-202ENST00000368436 ASTN1O14525 1302 aa18.94■□□□□ 0.62
CKS1B-202ENST00000368436 MROH7Q68CQ1 1323 aa18.94■□□□□ 0.62
CKS1B-202ENST00000368436 A0A0D9SFI3 127 aa18.93■□□□□ 0.62
CKS1B-202ENST00000368436 TIMP1P01033 207 aa18.93■□□□□ 0.62
CKS1B-202ENST00000368436 SNAP25P60880 206 aa18.93■□□□□ 0.62
CKS1B-202ENST00000368436 MUM1L1Q5H9M0 696 aa18.93■□□□□ 0.62
CKS1B-202ENST00000368436 GNASQ5JWF2 1037 aa18.93■□□□□ 0.62
CKS1B-202ENST00000368436 CCDC174Q6PII3 467 aa18.93■□□□□ 0.62
CKS1B-202ENST00000368436 BTNL9Q6UXG8 535 aa18.93■□□□□ 0.62
CKS1B-202ENST00000368436 SEMA6BQ9H3T3 888 aa18.93■□□□□ 0.62
CKS1B-202ENST00000368436 TCP11L1Q9NUJ3 509 aa18.93■□□□□ 0.62
CKS1B-202ENST00000368436 CYP39A1Q9NYL5 469 aa18.93■□□□□ 0.62
CKS1B-202ENST00000368436 ZMYM6O95789 1325 aa18.93■□□□□ 0.62
CKS1B-202ENST00000368436 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.92■□□□□ 0.62
CKS1B-202ENST00000368436 ARVCFO00192 962 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms