RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 IRF5Q13568 498 aa21.76■■□□□ 1.07
LMNA-204ENST00000368298 ADGRF4Q8IZF3 695 aa21.76■■□□□ 1.07
LMNA-204ENST00000368298 ABRAQ8N0Z2 381 aa21.76■■□□□ 1.07
LMNA-204ENST00000368298 CPXCR1Q8N123 301 aa21.76■■□□□ 1.07
LMNA-204ENST00000368298 SOCS4Q8WXH5 440 aa21.76■■□□□ 1.07
LMNA-204ENST00000368298 RIOX1Q9H6W3 641 aa21.76■■□□□ 1.07
LMNA-204ENST00000368298 RIPK3Q9Y572 518 aa21.76■■□□□ 1.07
LMNA-204ENST00000368298 SLC15A5A6NIM6 579 aa21.75■■□□□ 1.07
LMNA-204ENST00000368298 ECM2O94769 699 aaPredicted RBP21.75■■□□□ 1.07
LMNA-204ENST00000368298 PTPREP23469 700 aa21.75■■□□□ 1.07
LMNA-204ENST00000368298 PRKCZQ05513 592 aa21.75■■□□□ 1.07
LMNA-204ENST00000368298 SYNE3Q6ZMZ3 975 aa21.75■■□□□ 1.07
LMNA-204ENST00000368298 NCAPG2Q86XI2 1143 aa21.75■■□□□ 1.07
LMNA-204ENST00000368298 FANCBQ8NB91 859 aa21.75■■□□□ 1.07
LMNA-204ENST00000368298 CTCFLQ8NI51 663 aaPredicted RBP21.75■■□□□ 1.07
LMNA-204ENST00000368298 NUP133Q8WUM0 1156 aa21.75■■□□□ 1.07
LMNA-204ENST00000368298 MTMR8Q96EF0 704 aa21.75■■□□□ 1.07
LMNA-204ENST00000368298 MYL10Q9BUA6 226 aa21.75■■□□□ 1.07
LMNA-204ENST00000368298 ALDH8A1Q9H2A2 487 aaPredicted RBP21.75■■□□□ 1.07
LMNA-204ENST00000368298 GABRQQ9UN88 632 aa21.75■■□□□ 1.07
LMNA-204ENST00000368298 ZNF236Q9UL36 1845 aa21.75■■□□□ 1.07
LMNA-204ENST00000368298 RBM25P49756 843 aaKnown RBP21.74■■□□□ 1.07
LMNA-204ENST00000368298 FLT3LGP49771 235 aa21.74■■□□□ 1.07
LMNA-204ENST00000368298 FGD1P98174 961 aa21.74■■□□□ 1.07
LMNA-204ENST00000368298 GRB14Q14449 540 aa21.74■■□□□ 1.07
LMNA-204ENST00000368298 TKFCQ3LXA3 575 aa21.74■■□□□ 1.07
LMNA-204ENST00000368298 CHST13Q8NET6 341 aa21.74■■□□□ 1.07
LMNA-204ENST00000368298 BRF1Q92994 677 aa21.74■■□□□ 1.07
LMNA-204ENST00000368298 NUDT12Q9BQG2 462 aa21.74■■□□□ 1.07
LMNA-204ENST00000368298 UPF3BQ9BZI7 483 aaKnown RBP21.74■■□□□ 1.07
LMNA-204ENST00000368298 CPVLQ9H3G5 476 aa21.74■■□□□ 1.07
LMNA-204ENST00000368298 JMJD4Q9H9V9 463 aa21.74■■□□□ 1.07
LMNA-204ENST00000368298 IVNS1ABPQ9Y6Y0 642 aa21.74■■□□□ 1.07
LMNA-204ENST00000368298 XRCC5P13010 732 aaKnown RBP21.73■■□□□ 1.07
LMNA-204ENST00000368298 GNAQP50148 359 aa21.73■■□□□ 1.07
LMNA-204ENST00000368298 SNAP25P60880 206 aa21.73■■□□□ 1.07
LMNA-204ENST00000368298 SLC35G1Q2M3R5 365 aa21.73■■□□□ 1.07
LMNA-204ENST00000368298 AGBL1Q96MI9 1066 aa21.73■■□□□ 1.07
LMNA-204ENST00000368298 LZTS2Q9BRK4 669 aa21.73■■□□□ 1.07
LMNA-204ENST00000368298 FBXO40Q9UH90 709 aa21.73■■□□□ 1.07
LMNA-204ENST00000368298 TOB2Q14106 344 aaPredicted RBP21.72■■□□□ 1.07
LMNA-204ENST00000368298 PPP2R5BQ15173 497 aa21.72■■□□□ 1.07
LMNA-204ENST00000368298 NBPF11Q86T75 865 aa21.72■■□□□ 1.07
LMNA-204ENST00000368298 SPZ1Q9BXG8 430 aa21.72■■□□□ 1.07
LMNA-204ENST00000368298 PTCH2Q9Y6C5 1203 aa21.72■■□□□ 1.07
LMNA-204ENST00000368298 KLF18A0A0U1RQI7 1052 aa21.71■■□□□ 1.07
LMNA-204ENST00000368298 ZBTB43O43298 467 aa21.71■■□□□ 1.07
LMNA-204ENST00000368298 CYTH3O43739 400 aa21.71■■□□□ 1.07
LMNA-204ENST00000368298 HOXC6P09630 235 aa21.71■■□□□ 1.07
LMNA-204ENST00000368298 FCER1AP12319 257 aa21.71■■□□□ 1.07
LMNA-204ENST00000368298 MAP2K5Q13163 448 aa21.71■■□□□ 1.07
LMNA-204ENST00000368298 WDR78Q5VTH9 848 aa21.71■■□□□ 1.07
LMNA-204ENST00000368298 CCDC174Q6PII3 467 aa21.71■■□□□ 1.07
LMNA-204ENST00000368298 PXYLP1Q8TE99 480 aa21.71■■□□□ 1.07
LMNA-204ENST00000368298 C22orf23Q9BZE7 217 aa21.71■■□□□ 1.07
LMNA-204ENST00000368298 UPF2Q9HAU5 1272 aaKnown RBP21.71■■□□□ 1.07
LMNA-204ENST00000368298 CWC22Q9HCG8 908 aaKnown RBP21.71■■□□□ 1.07
LMNA-204ENST00000368298 PDRG1Q9NUG6 133 aa21.71■■□□□ 1.07
LMNA-204ENST00000368298 NID2Q14112 1375 aa21.71■■□□□ 1.07
LMNA-204ENST00000368298 RXRAP19793 462 aa21.71■■□□□ 1.07
LMNA-204ENST00000368298 APOBRQ0VD83 1088 aa21.71■■□□□ 1.07
LMNA-204ENST00000368298 CDC37Q16543 378 aaPredicted RBP21.71■■□□□ 1.07
LMNA-204ENST00000368298 MICU3Q86XE3 530 aa21.71■■□□□ 1.07
LMNA-204ENST00000368298 RAET1EQ8TD07 263 aa21.71■■□□□ 1.07
LMNA-204ENST00000368298 RBM28Q9NW13 759 aaKnown RBP21.71■■□□□ 1.07
LMNA-204ENST00000368298 CCPG1Q9ULG6 757 aa21.71■■□□□ 1.07
LMNA-204ENST00000368298 ZNFX1Q9P2E3 1918 aaKnown RBP21.7■■□□□ 1.07
LMNA-204ENST00000368298 SMCHD1A6NHR9 2005 aa21.7■■□□□ 1.06
LMNA-204ENST00000368298 ZBTB5O15062 677 aa21.7■■□□□ 1.06
LMNA-204ENST00000368298 RGS2P41220 211 aa21.7■■□□□ 1.06
LMNA-204ENST00000368298 KIF2CQ99661 725 aa21.7■■□□□ 1.06
LMNA-204ENST00000368298 VAT1LQ9HCJ6 419 aa21.7■■□□□ 1.06
LMNA-204ENST00000368298 HPS5Q9UPZ3 1129 aa21.7■■□□□ 1.06
LMNA-204ENST00000368298 ADORA2AP29274 412 aa21.69■■□□□ 1.06
LMNA-204ENST00000368298 QRICH1Q2TAL8 776 aa21.69■■□□□ 1.06
LMNA-204ENST00000368298 TMTC3Q6ZXV5 915 aa21.69■■□□□ 1.06
LMNA-204ENST00000368298 SRBD1Q8N5C6 995 aaKnown RBP21.69■■□□□ 1.06
LMNA-204ENST00000368298 TRERF1Q96PN7 1200 aa21.69■■□□□ 1.06
LMNA-204ENST00000368298 MMP19Q99542 508 aa21.69■■□□□ 1.06
LMNA-204ENST00000368298 MAF1Q9H063 256 aa21.69■■□□□ 1.06
LMNA-204ENST00000368298 ACAD9Q9H845 621 aa21.69■■□□□ 1.06
LMNA-204ENST00000368298 RNF146Q9NTX7 359 aa21.69■■□□□ 1.06
LMNA-204ENST00000368298 FAM217BQ9NTX9 383 aaPredicted RBP21.69■■□□□ 1.06
LMNA-204ENST00000368298 MYH6P13533 1939 aa21.68■■□□□ 1.06
LMNA-204ENST00000368298 DNAJC25-GNG10A0A024R161 153 aa21.68■■□□□ 1.06
LMNA-204ENST00000368298 DHX16O60231 1041 aaKnown RBP21.68■■□□□ 1.06
LMNA-204ENST00000368298 PLEKHA8P1O95397 391 aa21.68■■□□□ 1.06
LMNA-204ENST00000368298 ALAS1P13196 640 aa21.68■■□□□ 1.06
LMNA-204ENST00000368298 KCTD2Q14681 263 aa21.68■■□□□ 1.06
LMNA-204ENST00000368298 TRMT44Q8IYL2 757 aaKnown RBP21.68■■□□□ 1.06
LMNA-204ENST00000368298 SLAIN1Q8ND83 568 aa21.68■■□□□ 1.06
LMNA-204ENST00000368298 ZNF274Q96GC6 653 aaPredicted RBP21.68■■□□□ 1.06
LMNA-204ENST00000368298 APBA2Q99767 749 aa21.68■■□□□ 1.06
LMNA-204ENST00000368298 DIS3Q9Y2L1 958 aaKnown RBP21.68■■□□□ 1.06
LMNA-204ENST00000368298 PNMA6FA0A0J9YX94 578 aa21.67■■□□□ 1.06
LMNA-204ENST00000368298 ADCY3O60266 1144 aa21.67■■□□□ 1.06
LMNA-204ENST00000368298 COBLO75128 1261 aa21.67■■□□□ 1.06
LMNA-204ENST00000368298 IGHA2P01877 340 aa21.67■■□□□ 1.06
LMNA-204ENST00000368298 PDIA3P30101 505 aaKnown RBP21.67■■□□□ 1.06
LMNA-204ENST00000368298 GRK4P32298 578 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms