RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 LRRC26Q2I0M4 334 aa17.22■□□□□ 0.35
SF3B5-201ENST00000367569 RALYLQ86SE5 291 aaKnown RBP17.22■□□□□ 0.35
SF3B5-201ENST00000367569 DPP9Q86TI2 863 aa17.22■□□□□ 0.35
SF3B5-201ENST00000367569 LRCH3Q96II8 777 aa17.22■□□□□ 0.35
SF3B5-201ENST00000367569 ZSCAN10Q96SZ4 725 aaPredicted RBP17.22■□□□□ 0.35
SF3B5-201ENST00000367569 UBAC1Q9BSL1 405 aa17.22■□□□□ 0.35
SF3B5-201ENST00000367569 KRT23Q9C075 422 aa17.22■□□□□ 0.35
SF3B5-201ENST00000367569 SENP2Q9HC62 589 aa17.22■□□□□ 0.35
SF3B5-201ENST00000367569 TCP11L1Q9NUJ3 509 aa17.22■□□□□ 0.35
SF3B5-201ENST00000367569 FEM1BQ9UK73 627 aa17.22■□□□□ 0.35
SF3B5-201ENST00000367569 RIPK3Q9Y572 518 aa17.22■□□□□ 0.35
SF3B5-201ENST00000367569 MCM3APO60318 1980 aa17.21■□□□□ 0.35
SF3B5-201ENST00000367569 SLC27A2O14975 620 aa17.21■□□□□ 0.35
SF3B5-201ENST00000367569 MAGEA10P43363 369 aaPredicted RBP17.21■□□□□ 0.35
SF3B5-201ENST00000367569 PPP4R3BQ5MIZ7 849 aa17.21■□□□□ 0.35
SF3B5-201ENST00000367569 CASC1Q6TDU7 716 aa17.21■□□□□ 0.35
SF3B5-201ENST00000367569 IQCA1Q86XH1 822 aa17.21■□□□□ 0.35
SF3B5-201ENST00000367569 DCAF4Q8WV16 495 aa17.21■□□□□ 0.35
SF3B5-201ENST00000367569 CNNM2Q9H8M5 875 aa17.21■□□□□ 0.35
SF3B5-201ENST00000367569 SYNPO2Q9UMS6 1093 aa17.21■□□□□ 0.35
SF3B5-201ENST00000367569 ADAMTS5Q9UNA0 930 aa17.21■□□□□ 0.35
SF3B5-201ENST00000367569 PGK2P07205 417 aa17.2■□□□□ 0.34
SF3B5-201ENST00000367569 PDHBP11177 359 aa17.2■□□□□ 0.34
SF3B5-201ENST00000367569 CYBAP13498 195 aa17.2■□□□□ 0.34
SF3B5-201ENST00000367569 STAT3P40763 770 aa17.2■□□□□ 0.34
SF3B5-201ENST00000367569 ANTXR2P58335 489 aa17.2■□□□□ 0.34
SF3B5-201ENST00000367569 OLFML2BQ68BL8 750 aa17.2■□□□□ 0.34
SF3B5-201ENST00000367569 CREB3L3Q68CJ9 461 aa17.2■□□□□ 0.34
SF3B5-201ENST00000367569 PRPF38AQ8NAV1 312 aaKnown RBP17.2■□□□□ 0.34
SF3B5-201ENST00000367569 PNMA1Q8ND90 353 aa17.2■□□□□ 0.34
SF3B5-201ENST00000367569 SENP6Q9GZR1 1112 aaPredicted RBP17.2■□□□□ 0.34
SF3B5-201ENST00000367569 MROH8Q9H579 483 aa17.2■□□□□ 0.34
SF3B5-201ENST00000367569 KAT14Q9H8E8 782 aa17.2■□□□□ 0.34
SF3B5-201ENST00000367569 GPHNQ9NQX3 736 aaPredicted RBP17.2■□□□□ 0.34
SF3B5-201ENST00000367569 PRR12Q9ULL5 1215 aa17.2■□□□□ 0.34
SF3B5-201ENST00000367569 MSCO60682 206 aa17.19■□□□□ 0.34
SF3B5-201ENST00000367569 ZBED4O75132 1171 aa17.19■□□□□ 0.34
SF3B5-201ENST00000367569 TRDNQ13061 729 aa17.19■□□□□ 0.34
SF3B5-201ENST00000367569 ERICH6BQ5W0A0 696 aa17.19■□□□□ 0.34
SF3B5-201ENST00000367569 RIOX2Q8IUF8 465 aa17.19■□□□□ 0.34
SF3B5-201ENST00000367569 AGBL1Q96MI9 1066 aa17.19■□□□□ 0.34
SF3B5-201ENST00000367569 MMP19Q99542 508 aa17.19■□□□□ 0.34
SF3B5-201ENST00000367569 TEX13BQ9BXU2 312 aa17.19■□□□□ 0.34
SF3B5-201ENST00000367569 SLC38A10Q9HBR0 1119 aa17.19■□□□□ 0.34
SF3B5-201ENST00000367569 LRRC37A2A6NM11 1700 aa17.18■□□□□ 0.34
SF3B5-201ENST00000367569 DNAH12Q6ZR08 3092 aa17.18■□□□□ 0.34
SF3B5-201ENST00000367569 PRAMEF19Q5SWL8 479 aa17.18■□□□□ 0.34
SF3B5-201ENST00000367569 IFIT1BQ5T764 474 aaKnown RBP17.18■□□□□ 0.34
SF3B5-201ENST00000367569 ANO1Q5XXA6 986 aa17.18■□□□□ 0.34
SF3B5-201ENST00000367569 FAM160B2Q86V87 743 aa17.18■□□□□ 0.34
SF3B5-201ENST00000367569 MB21D2Q8IYB1 491 aaPredicted RBP17.18■□□□□ 0.34
SF3B5-201ENST00000367569 NCOA7Q8NI08 942 aa17.18■□□□□ 0.34
SF3B5-201ENST00000367569 LRRC2Q9BYS8 371 aa17.18■□□□□ 0.34
SF3B5-201ENST00000367569 IFIT3O14879 490 aaKnown RBP17.17■□□□□ 0.34
SF3B5-201ENST00000367569 ZNF543Q08ER8 600 aa17.17■□□□□ 0.34
SF3B5-201ENST00000367569 SEC23AQ15436 765 aa17.17■□□□□ 0.34
SF3B5-201ENST00000367569 GJC2Q5T442 439 aaPredicted RBP17.17■□□□□ 0.34
SF3B5-201ENST00000367569 SYDE2Q5VT97 1194 aa17.17■□□□□ 0.34
SF3B5-201ENST00000367569 RAB11FIP4Q86YS3 637 aa17.17■□□□□ 0.34
SF3B5-201ENST00000367569 ABRAQ8N0Z2 381 aa17.17■□□□□ 0.34
SF3B5-201ENST00000367569 CHURC1Q8WUH1 139 aa17.17■□□□□ 0.34
SF3B5-201ENST00000367569 UBA5Q9GZZ9 404 aa17.17■□□□□ 0.34
SF3B5-201ENST00000367569 ZNF536O15090 1300 aa17.17■□□□□ 0.34
SF3B5-201ENST00000367569 DNM1LO00429 736 aa17.16■□□□□ 0.34
SF3B5-201ENST00000367569 SLC25A27O95847 323 aa17.16■□□□□ 0.34
SF3B5-201ENST00000367569 FCER1AP12319 257 aa17.16■□□□□ 0.34
SF3B5-201ENST00000367569 ALAS1P13196 640 aa17.16■□□□□ 0.34
SF3B5-201ENST00000367569 ATN1P54259 1190 aaPredicted RBP17.16■□□□□ 0.34
SF3B5-201ENST00000367569 TMEM67Q5HYA8 995 aa17.16■□□□□ 0.34
SF3B5-201ENST00000367569 DGKHQ86XP1 1220 aa17.16■□□□□ 0.34
SF3B5-201ENST00000367569 MAML3Q96JK9 1138 aa17.16■□□□□ 0.34
SF3B5-201ENST00000367569 TCEANC2Q96MN5 208 aa17.16■□□□□ 0.34
SF3B5-201ENST00000367569 TTC14Q96N46 770 aa17.16■□□□□ 0.34
SF3B5-201ENST00000367569 MYL10Q9BUA6 226 aa17.16■□□□□ 0.34
SF3B5-201ENST00000367569 UBE2OQ9C0C9 1292 aaKnown RBP17.16■□□□□ 0.34
SF3B5-201ENST00000367569 RNF146Q9NTX7 359 aa17.16■□□□□ 0.34
SF3B5-201ENST00000367569 SLC5A4Q9NY91 659 aa17.16■□□□□ 0.34
SF3B5-201ENST00000367569 SEPT4O43236 478 aa17.15■□□□□ 0.34
SF3B5-201ENST00000367569 PRC1O43663 620 aa17.15■□□□□ 0.34
SF3B5-201ENST00000367569 DHX16O60231 1041 aaKnown RBP17.15■□□□□ 0.34
SF3B5-201ENST00000367569 SNHG28P0DPA3 235 aa17.15■□□□□ 0.34
SF3B5-201ENST00000367569 MDM2Q00987 491 aaPredicted RBP17.15■□□□□ 0.34
SF3B5-201ENST00000367569 KCTD2Q14681 263 aa17.15■□□□□ 0.34
SF3B5-201ENST00000367569 NECTIN1Q15223 517 aa17.15■□□□□ 0.34
SF3B5-201ENST00000367569 RASEFQ8IZ41 740 aa17.15■□□□□ 0.34
SF3B5-201ENST00000367569 TDHQ8IZJ6 230 aa17.15■□□□□ 0.34
SF3B5-201ENST00000367569 CCPG1Q9ULG6 757 aa17.15■□□□□ 0.34
SF3B5-201ENST00000367569 WTAPQ15007 396 aa17.14■□□□□ 0.33
SF3B5-201ENST00000367569 LRIT3Q3SXY7 679 aa17.14■□□□□ 0.33
SF3B5-201ENST00000367569 CCDC178Q5BJE1 867 aa17.14■□□□□ 0.33
SF3B5-201ENST00000367569 MUM1L1Q5H9M0 696 aa17.14■□□□□ 0.33
SF3B5-201ENST00000367569 STAG2Q8N3U4 1231 aa17.14■□□□□ 0.33
SF3B5-201ENST00000367569 ARRDC4Q8NCT1 418 aa17.14■□□□□ 0.33
SF3B5-201ENST00000367569 DDX49Q9Y6V7 483 aaKnown RBP17.14■□□□□ 0.33
SF3B5-201ENST00000367569 BAZ2BQ9UIF8 2168 aaKnown RBP17.13■□□□□ 0.33
SF3B5-201ENST00000367569 ERICH2A1L162 156 aa17.13■□□□□ 0.33
SF3B5-201ENST00000367569 CPA1P15085 419 aa17.13■□□□□ 0.33
SF3B5-201ENST00000367569 RXRAP19793 462 aa17.13■□□□□ 0.33
SF3B5-201ENST00000367569 ZNF792Q3KQV3 632 aa17.13■□□□□ 0.33
SF3B5-201ENST00000367569 ADCK5Q3MIX3 580 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms