RNA–Protein interactions for RNA: ENST00000367393.7

C1orf53-201, Transcript of chromosome 1 open reading frame 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf53, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf53-201ENST00000367393 SNHG28P0DPA3 235 aa17.15■□□□□ 0.34
C1orf53-201ENST00000367393 ZNF543Q08ER8 600 aa17.15■□□□□ 0.34
C1orf53-201ENST00000367393 ZNF792Q3KQV3 632 aa17.15■□□□□ 0.34
C1orf53-201ENST00000367393 SYDE2Q5VT97 1194 aa17.15■□□□□ 0.34
C1orf53-201ENST00000367393 CCDC174Q6PII3 467 aa17.15■□□□□ 0.34
C1orf53-201ENST00000367393 CYB5R4Q7L1T6 521 aa17.15■□□□□ 0.34
C1orf53-201ENST00000367393 UBE2Q1Q7Z7E8 422 aa17.15■□□□□ 0.34
C1orf53-201ENST00000367393 PNMA1Q8ND90 353 aa17.15■□□□□ 0.34
C1orf53-201ENST00000367393 CHST13Q8NET6 341 aa17.15■□□□□ 0.34
C1orf53-201ENST00000367393 DDX11Q96FC9 970 aa17.15■□□□□ 0.34
C1orf53-201ENST00000367393 LSG1Q9H089 658 aaKnown RBP17.15■□□□□ 0.34
C1orf53-201ENST00000367393 KAT14Q9H8E8 782 aa17.15■□□□□ 0.34
C1orf53-201ENST00000367393 FBXO40Q9UH90 709 aa17.15■□□□□ 0.34
C1orf53-201ENST00000367393 DIS3Q9Y2L1 958 aaKnown RBP17.15■□□□□ 0.34
C1orf53-201ENST00000367393 TAF6LQ9Y6J9 622 aa17.15■□□□□ 0.34
C1orf53-201ENST00000367393 TNKSO95271 1327 aa17.15■□□□□ 0.34
C1orf53-201ENST00000367393 MCM3APO60318 1980 aa17.15■□□□□ 0.34
C1orf53-201ENST00000367393 FRMPD3Q5JV73 1810 aa17.14■□□□□ 0.34
C1orf53-201ENST00000367393 FARP2O94887 1054 aaPredicted RBP17.14■□□□□ 0.33
C1orf53-201ENST00000367393 CNGA1P29973 690 aa17.14■□□□□ 0.33
C1orf53-201ENST00000367393 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.14■□□□□ 0.33
C1orf53-201ENST00000367393 HOMER2Q9NSB8 354 aa17.14■□□□□ 0.33
C1orf53-201ENST00000367393 DNAJC25-GNG10A0A024R161 153 aa17.13■□□□□ 0.33
C1orf53-201ENST00000367393 ALAS1P13196 640 aa17.13■□□□□ 0.33
C1orf53-201ENST00000367393 SEC23AQ15436 765 aa17.13■□□□□ 0.33
C1orf53-201ENST00000367393 TKFCQ3LXA3 575 aa17.13■□□□□ 0.33
C1orf53-201ENST00000367393 GPATCH4Q5T3I0 446 aaKnown RBP17.13■□□□□ 0.33
C1orf53-201ENST00000367393 IFIT1BQ5T764 474 aaKnown RBP17.13■□□□□ 0.33
C1orf53-201ENST00000367393 LHX8Q68G74 356 aa17.13■□□□□ 0.33
C1orf53-201ENST00000367393 STOX1Q6ZVD7 989 aa17.13■□□□□ 0.33
C1orf53-201ENST00000367393 ANKRD35Q8N283 1001 aa17.13■□□□□ 0.33
C1orf53-201ENST00000367393 TRPV1Q8NER1 839 aa17.13■□□□□ 0.33
C1orf53-201ENST00000367393 NCOA7Q8NI08 942 aa17.13■□□□□ 0.33
C1orf53-201ENST00000367393 TRERF1Q96PN7 1200 aa17.13■□□□□ 0.33
C1orf53-201ENST00000367393 RANBP17Q9H2T7 1088 aaKnown RBP17.13■□□□□ 0.33
C1orf53-201ENST00000367393 OGDHLQ9ULD0 1010 aa17.13■□□□□ 0.33
C1orf53-201ENST00000367393 CDC45O75419 566 aa17.12■□□□□ 0.33
C1orf53-201ENST00000367393 GOLGA8HP0CJ92 632 aa17.12■□□□□ 0.33
C1orf53-201ENST00000367393 CYBAP13498 195 aa17.12■□□□□ 0.33
C1orf53-201ENST00000367393 PRAMEF19Q5SWL8 479 aa17.12■□□□□ 0.33
C1orf53-201ENST00000367393 ERICH6BQ5W0A0 696 aa17.12■□□□□ 0.33
C1orf53-201ENST00000367393 CASC1Q6TDU7 716 aa17.12■□□□□ 0.33
C1orf53-201ENST00000367393 RALYLQ86SE5 291 aaKnown RBP17.12■□□□□ 0.33
C1orf53-201ENST00000367393 ANKLE1Q8NAG6 615 aa17.12■□□□□ 0.33
C1orf53-201ENST00000367393 TINF2Q9BSI4 451 aa17.12■□□□□ 0.33
C1orf53-201ENST00000367393 ACAD9Q9H845 621 aa17.12■□□□□ 0.33
C1orf53-201ENST00000367393 ANO2Q9NQ90 1003 aa17.12■□□□□ 0.33
C1orf53-201ENST00000367393 RNF146Q9NTX7 359 aa17.12■□□□□ 0.33
C1orf53-201ENST00000367393 PPP4R2Q9NY27 417 aa17.12■□□□□ 0.33
C1orf53-201ENST00000367393 CCPG1Q9ULG6 757 aa17.12■□□□□ 0.33
C1orf53-201ENST00000367393 IFIT3O14879 490 aaKnown RBP17.11■□□□□ 0.33
C1orf53-201ENST00000367393 MYCNP04198 464 aaPredicted RBP17.11■□□□□ 0.33
C1orf53-201ENST00000367393 ICAM1P05362 532 aa17.11■□□□□ 0.33
C1orf53-201ENST00000367393 NECTIN1Q15223 517 aa17.11■□□□□ 0.33
C1orf53-201ENST00000367393 PAWRQ96IZ0 340 aaKnown RBP17.11■□□□□ 0.33
C1orf53-201ENST00000367393 UBA5Q9GZZ9 404 aa17.11■□□□□ 0.33
C1orf53-201ENST00000367393 DDX20Q9UHI6 824 aaKnown RBP17.11■□□□□ 0.33
C1orf53-201ENST00000367393 ERICH2A1L162 156 aa17.1■□□□□ 0.33
C1orf53-201ENST00000367393 SLC27A2O14975 620 aa17.1■□□□□ 0.33
C1orf53-201ENST00000367393 MUM1L1Q5H9M0 696 aa17.1■□□□□ 0.33
C1orf53-201ENST00000367393 CHST3Q7LGC8 479 aa17.1■□□□□ 0.33
C1orf53-201ENST00000367393 CPVLQ9H3G5 476 aa17.1■□□□□ 0.33
C1orf53-201ENST00000367393 BAZ2BQ9UIF8 2168 aaKnown RBP17.1■□□□□ 0.33
C1orf53-201ENST00000367393 SEPT4O43236 478 aa17.09■□□□□ 0.33
C1orf53-201ENST00000367393 MSCO60682 206 aa17.09■□□□□ 0.33
C1orf53-201ENST00000367393 PARP1P09874 1014 aaKnown RBP17.09■□□□□ 0.33
C1orf53-201ENST00000367393 MNX1P50219 401 aaPredicted RBP17.09■□□□□ 0.33
C1orf53-201ENST00000367393 ASPRV1Q53RT3 343 aa17.09■□□□□ 0.33
C1orf53-201ENST00000367393 CREB3L3Q68CJ9 461 aa17.09■□□□□ 0.33
C1orf53-201ENST00000367393 NECAB2Q7Z6G3 386 aa17.09■□□□□ 0.33
C1orf53-201ENST00000367393 ZNF467Q7Z7K2 595 aaPredicted RBP17.09■□□□□ 0.33
C1orf53-201ENST00000367393 MB21D2Q8IYB1 491 aaPredicted RBP17.09■□□□□ 0.33
C1orf53-201ENST00000367393 MSL3Q8N5Y2 521 aaKnown RBP17.09■□□□□ 0.33
C1orf53-201ENST00000367393 DIS3LQ8TF46 1054 aaKnown RBP17.09■□□□□ 0.33
C1orf53-201ENST00000367393 DPF3Q92784 378 aa17.09■□□□□ 0.33
C1orf53-201ENST00000367393 HTATIP2Q9BUP3 242 aa17.09■□□□□ 0.33
C1orf53-201ENST00000367393 A1CFQ9NQ94 594 aaKnown RBP17.09■□□□□ 0.33
C1orf53-201ENST00000367393 ALPK3Q96L96 1907 aa17.08■□□□□ 0.33
C1orf53-201ENST00000367393 POTEB2H3BUK9 544 aa17.08■□□□□ 0.32
C1orf53-201ENST00000367393 TAL1P17542 331 aaPredicted RBP17.08■□□□□ 0.32
C1orf53-201ENST00000367393 ANTXR2P58335 489 aa17.08■□□□□ 0.32
C1orf53-201ENST00000367393 CNTN2Q02246 1040 aa17.08■□□□□ 0.32
C1orf53-201ENST00000367393 WTAPQ15007 396 aa17.08■□□□□ 0.32
C1orf53-201ENST00000367393 SART3Q15020 963 aaKnown RBP17.08■□□□□ 0.32
C1orf53-201ENST00000367393 MAMDC4Q6UXC1 1216 aa17.08■□□□□ 0.32
C1orf53-201ENST00000367393 IGDCC4Q8TDY8 1250 aa17.08■□□□□ 0.32
C1orf53-201ENST00000367393 SENP2Q9HC62 589 aa17.08■□□□□ 0.32
C1orf53-201ENST00000367393 NRBP1Q9UHY1 535 aa17.08■□□□□ 0.32
C1orf53-201ENST00000367393 PNMA2Q9UL42 364 aa17.08■□□□□ 0.32
C1orf53-201ENST00000367393 LCTP09848 1927 aa17.08■□□□□ 0.32
C1orf53-201ENST00000367393 PFASO15067 1338 aa17.07■□□□□ 0.32
C1orf53-201ENST00000367393 SYNGAP1Q96PV0 1343 aa17.07■□□□□ 0.32
C1orf53-201ENST00000367393 SNAI1O95863 264 aaPredicted RBP17.07■□□□□ 0.32
C1orf53-201ENST00000367393 TMEM67Q5HYA8 995 aa17.07■□□□□ 0.32
C1orf53-201ENST00000367393 PRPF38BQ5VTL8 546 aaKnown RBP17.07■□□□□ 0.32
C1orf53-201ENST00000367393 ANO1Q5XXA6 986 aa17.07■□□□□ 0.32
C1orf53-201ENST00000367393 ADGRF4Q8IZF3 695 aa17.07■□□□□ 0.32
C1orf53-201ENST00000367393 STAG2Q8N3U4 1231 aa17.07■□□□□ 0.32
C1orf53-201ENST00000367393 FAM133AQ8N9E0 248 aa17.07■□□□□ 0.32
C1orf53-201ENST00000367393 FGD4Q96M96 766 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms