RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 C8orf37Q96NL8 207 aa12.94□□□□□ -0.34
PRKN-206ENST00000366898 NKIRAS1Q9NYS0 192 aa12.94□□□□□ -0.34
PRKN-206ENST00000366898 WWC3Q9ULE0 1092 aa12.94□□□□□ -0.34
PRKN-206ENST00000366898 SLC4A7Q9Y6M7 1214 aa12.94□□□□□ -0.34
PRKN-206ENST00000366898 TTC36A6NLP5 189 aa12.94□□□□□ -0.34
PRKN-206ENST00000366898 PDIA3P30101 505 aaKnown RBP12.94□□□□□ -0.34
PRKN-206ENST00000366898 SSRP1Q08945 709 aaKnown RBP12.94□□□□□ -0.34
PRKN-206ENST00000366898 DDB1Q16531 1140 aa12.94□□□□□ -0.34
PRKN-206ENST00000366898 HOOK3Q86VS8 718 aa12.94□□□□□ -0.34
PRKN-206ENST00000366898 ANKRD13CQ8N6S4 541 aa12.94□□□□□ -0.34
PRKN-206ENST00000366898 STMN4Q9H169 189 aaPredicted RBP12.94□□□□□ -0.34
PRKN-206ENST00000366898 H7C1W4 665 aa12.94□□□□□ -0.34
PRKN-206ENST00000366898 CDC25CP30307 473 aa12.94□□□□□ -0.34
PRKN-206ENST00000366898 SLC8A3P57103 927 aa12.94□□□□□ -0.34
PRKN-206ENST00000366898 TTF1Q15361 905 aaPredicted RBP12.94□□□□□ -0.34
PRKN-206ENST00000366898 PTPROQ16827 1216 aa12.94□□□□□ -0.34
PRKN-206ENST00000366898 SH2D3CQ8N5H7 860 aa12.94□□□□□ -0.34
PRKN-206ENST00000366898 AIFM3Q96NN9 605 aa12.94□□□□□ -0.34
PRKN-206ENST00000366898 SPATA31A3Q5VYP0 1347 aa12.94□□□□□ -0.34
PRKN-206ENST00000366898 C1orf167Q5SNV9 1468 aa12.94□□□□□ -0.34
PRKN-206ENST00000366898 ZMYM1Q5SVZ6 1142 aa12.93□□□□□ -0.34
PRKN-206ENST00000366898 AMOTL1Q8IY63 956 aa12.93□□□□□ -0.34
PRKN-206ENST00000366898 NSUN7Q8NE18 718 aaKnown RBP12.93□□□□□ -0.34
PRKN-206ENST00000366898 HVCN1Q96D96 273 aa12.93□□□□□ -0.34
PRKN-206ENST00000366898 SLC40A1Q9NP59 571 aa12.93□□□□□ -0.34
PRKN-206ENST00000366898 AP5Z1O43299 807 aa12.93□□□□□ -0.34
PRKN-206ENST00000366898 C2orf54Q08AI8 447 aa12.93□□□□□ -0.34
PRKN-206ENST00000366898 MRRFQ96E11 262 aaKnown RBP12.93□□□□□ -0.34
PRKN-206ENST00000366898 C3P01024 1663 aa12.93□□□□□ -0.34
PRKN-206ENST00000366898 NDUFA8P51970 172 aa12.93□□□□□ -0.34
PRKN-206ENST00000366898 CCZ1BP86790 482 aa12.93□□□□□ -0.34
PRKN-206ENST00000366898 CCZ1P86791 482 aaPredicted RBP12.93□□□□□ -0.34
PRKN-206ENST00000366898 MIER3Q7Z3K6 550 aa12.93□□□□□ -0.34
PRKN-206ENST00000366898 DYDC2Q96IM9 177 aa12.93□□□□□ -0.34
PRKN-206ENST00000366898 LBHD1Q9BQE6 289 aaPredicted RBP12.93□□□□□ -0.34
PRKN-206ENST00000366898 DDX23Q9BUQ8 820 aaKnown RBP12.93□□□□□ -0.34
PRKN-206ENST00000366898 DSCC1Q9BVC3 393 aa12.93□□□□□ -0.34
PRKN-206ENST00000366898 KCNH3Q9ULD8 1083 aa12.93□□□□□ -0.34
PRKN-206ENST00000366898 UBR1Q8IWV7 1749 aa12.92□□□□□ -0.34
PRKN-206ENST00000366898 PLEKHG2Q9H7P9 1386 aa12.92□□□□□ -0.34
PRKN-206ENST00000366898 G3V3G9 751 aa12.92□□□□□ -0.34
PRKN-206ENST00000366898 CXCR5P32302 372 aa12.92□□□□□ -0.34
PRKN-206ENST00000366898 FOXO4P98177 505 aa12.92□□□□□ -0.34
PRKN-206ENST00000366898 DCAF8Q5TAQ9 597 aa12.92□□□□□ -0.34
PRKN-206ENST00000366898 TOGARAM2Q6ZUX3 1019 aa12.92□□□□□ -0.34
PRKN-206ENST00000366898 STAMQ92783 540 aa12.92□□□□□ -0.34
PRKN-206ENST00000366898 TSPYL2Q9H2G4 693 aaPredicted RBP12.92□□□□□ -0.34
PRKN-206ENST00000366898 KLHL14Q9P2G3 628 aa12.92□□□□□ -0.34
PRKN-206ENST00000366898 VIRMAQ69YN4 1812 aaKnown RBP12.92□□□□□ -0.34
PRKN-206ENST00000366898 POLR2DO15514 142 aaKnown RBP12.92□□□□□ -0.34
PRKN-206ENST00000366898 GNAT1P11488 350 aa12.92□□□□□ -0.34
PRKN-206ENST00000366898 RBM5P52756 815 aaKnown RBP eCLIP12.92□□□□□ -0.34
PRKN-206ENST00000366898 SLMAPQ14BN4 828 aa12.92□□□□□ -0.34
PRKN-206ENST00000366898 VPS36Q86VN1 386 aa12.92□□□□□ -0.34
PRKN-206ENST00000366898 FGD4Q96M96 766 aa12.92□□□□□ -0.34
PRKN-206ENST00000366898 SEC31BQ9NQW1 1179 aa12.92□□□□□ -0.34
PRKN-206ENST00000366898 KNDC1Q76NI1 1749 aa12.92□□□□□ -0.34
PRKN-206ENST00000366898 PFKFB2O60825 505 aa12.92□□□□□ -0.34
PRKN-206ENST00000366898 SRGAP2O75044 1071 aa12.92□□□□□ -0.34
PRKN-206ENST00000366898 SEC24CP53992 1094 aa12.92□□□□□ -0.34
PRKN-206ENST00000366898 DYNC1I2Q13409 638 aaKnown RBP12.92□□□□□ -0.34
PRKN-206ENST00000366898 WTAPQ15007 396 aa12.92□□□□□ -0.34
PRKN-206ENST00000366898 DNAJC8O75937 253 aaPredicted RBP12.91□□□□□ -0.34
PRKN-206ENST00000366898 SASH3O75995 380 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 TBC1D8BQ0IIM8 1120 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 PHLDB3Q6NSJ2 640 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 NYAP1Q6ZVC0 841 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 ATG9AQ7Z3C6 839 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 ZC3H18Q86VM9 953 aaKnown RBP12.91□□□□□ -0.34
PRKN-206ENST00000366898 FCHSD1Q86WN1 690 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 WASF1Q92558 559 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 PAPOLBQ9NRJ5 636 aaKnown RBP12.91□□□□□ -0.34
PRKN-206ENST00000366898 PPP1R9AQ9ULJ8 1098 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 RGPD8O14715 1765 aaPredicted RBP12.91□□□□□ -0.34
PRKN-206ENST00000366898 TMEM110-MUSTN1A8MSY1 372 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 RGS16O15492 202 aaPredicted RBP12.91□□□□□ -0.34
PRKN-206ENST00000366898 CAVIN4Q5BKX8 364 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 ANO1Q5XXA6 986 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 ARMCX5Q6P1M9 558 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 APBB1IPQ7Z5R6 666 aaPredicted RBP12.91□□□□□ -0.34
PRKN-206ENST00000366898 PARD3BQ8TEW8 1205 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 ELAC2Q9BQ52 826 aaKnown RBP12.91□□□□□ -0.34
PRKN-206ENST00000366898 EPB41L5Q9HCM4 733 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 INTUQ9ULD6 942 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 KCNJ14Q9UNX9 436 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 MON2Q7Z3U7 1717 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 UQCRFS1P1P0C7P4 283 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 PDHBP11177 359 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 CASP14P31944 242 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 MAGEA1P43355 309 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 BCAMP50895 628 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 CTSWP56202 376 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 SNX1Q13596 522 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 CFAP221Q4G0U5 840 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 MYLK4Q86YV6 388 aaPredicted RBP12.91□□□□□ -0.34
PRKN-206ENST00000366898 ZBTB38Q8NAP3 1195 aaPredicted RBP12.91□□□□□ -0.34
PRKN-206ENST00000366898 PGBD1Q96JS3 809 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 CLIC4Q9Y696 253 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 FAM170AA1A519 330 aa12.91□□□□□ -0.34
PRKN-206ENST00000366898 RFX5P48382 616 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms