RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 FOXP1Q9H334 677 aaPredicted RBP17.2■□□□□ 0.34
FBXO28-201ENST00000366862 DZIP3Q86Y13 1208 aaKnown RBP17.19■□□□□ 0.34
FBXO28-201ENST00000366862 CTAGE3PQ8IX95 158 aa17.19■□□□□ 0.34
FBXO28-201ENST00000366862 NIP7Q9Y221 180 aaKnown RBP eCLIP17.19■□□□□ 0.34
FBXO28-201ENST00000366862 CTTNBP2Q8WZ74 1663 aa17.19■□□□□ 0.34
FBXO28-201ENST00000366862 ADD1P35611 737 aaKnown RBP17.19■□□□□ 0.34
FBXO28-201ENST00000366862 BLIDQ8IZY5 108 aa17.19■□□□□ 0.34
FBXO28-201ENST00000366862 NDUFB9Q9Y6M9 179 aa17.19■□□□□ 0.34
FBXO28-201ENST00000366862 BTBD18B2RXH4 712 aa17.19■□□□□ 0.34
FBXO28-201ENST00000366862 B4DLN1 442 aa17.19■□□□□ 0.34
FBXO28-201ENST00000366862 TAF5LO75529 589 aa17.19■□□□□ 0.34
FBXO28-201ENST00000366862 ZAP70P43403 619 aa17.19■□□□□ 0.34
FBXO28-201ENST00000366862 GALNT17Q6IS24 598 aa17.19■□□□□ 0.34
FBXO28-201ENST00000366862 TRIM42Q8IWZ5 723 aa17.19■□□□□ 0.34
FBXO28-201ENST00000366862 RAB20Q9NX57 234 aa17.19■□□□□ 0.34
FBXO28-201ENST00000366862 NOVA2Q9UNW9 492 aaKnown RBP17.19■□□□□ 0.34
FBXO28-201ENST00000366862 LAMC3Q9Y6N6 1575 aa17.19■□□□□ 0.34
FBXO28-201ENST00000366862 STRN3Q13033 797 aa17.19■□□□□ 0.34
FBXO28-201ENST00000366862 DYNC1I2Q13409 638 aaKnown RBP17.19■□□□□ 0.34
FBXO28-201ENST00000366862 CCDC93Q567U6 631 aa17.19■□□□□ 0.34
FBXO28-201ENST00000366862 SRLQ86TD4 932 aa17.19■□□□□ 0.34
FBXO28-201ENST00000366862 NLRP7Q8WX94 980 aa17.19■□□□□ 0.34
FBXO28-201ENST00000366862 RSAD2Q8WXG1 361 aa17.19■□□□□ 0.34
FBXO28-201ENST00000366862 BPIFA3Q9BQP9 254 aa17.19■□□□□ 0.34
FBXO28-201ENST00000366862 KDM5AP29375 1690 aaKnown RBP17.19■□□□□ 0.34
FBXO28-201ENST00000366862 DHX9Q08211 1270 aaKnown RBP17.18■□□□□ 0.34
FBXO28-201ENST00000366862 ANKRD20A4Q4UJ75 823 aa17.18■□□□□ 0.34
FBXO28-201ENST00000366862 ANKRD20A8PQ5CZ79 823 aa17.18■□□□□ 0.34
FBXO28-201ENST00000366862 ANKRD20A2Q5SQ80 823 aa17.18■□□□□ 0.34
FBXO28-201ENST00000366862 ANKRD20A1Q5TYW2 823 aa17.18■□□□□ 0.34
FBXO28-201ENST00000366862 FANCBQ8NB91 859 aa17.18■□□□□ 0.34
FBXO28-201ENST00000366862 EAF2Q96CJ1 260 aaPredicted RBP17.18■□□□□ 0.34
FBXO28-201ENST00000366862 TRPM2O94759 1503 aa17.18■□□□□ 0.34
FBXO28-201ENST00000366862 SART1O43290 800 aaKnown RBP17.18■□□□□ 0.34
FBXO28-201ENST00000366862 CREB3O43889 395 aa17.18■□□□□ 0.34
FBXO28-201ENST00000366862 N4BP1O75113 896 aaKnown RBP17.18■□□□□ 0.34
FBXO28-201ENST00000366862 HSPA6P17066 643 aa17.18■□□□□ 0.34
FBXO28-201ENST00000366862 ANKRD13CQ8N6S4 541 aa17.18■□□□□ 0.34
FBXO28-201ENST00000366862 PDCD7Q8N8D1 485 aaKnown RBP17.18■□□□□ 0.34
FBXO28-201ENST00000366862 NYXQ9GZU5 481 aa17.18■□□□□ 0.34
FBXO28-201ENST00000366862 RWDD2AQ9UIY3 292 aa17.18■□□□□ 0.34
FBXO28-201ENST00000366862 GCC2Q8IWJ2 1684 aa17.18■□□□□ 0.34
FBXO28-201ENST00000366862 DNAJC8O75937 253 aaPredicted RBP17.18■□□□□ 0.34
FBXO28-201ENST00000366862 LPIN2Q92539 896 aa17.18■□□□□ 0.34
FBXO28-201ENST00000366862 NCAPGQ9BPX3 1015 aa17.18■□□□□ 0.34
FBXO28-201ENST00000366862 ATP8A1Q9Y2Q0 1164 aa17.18■□□□□ 0.34
FBXO28-201ENST00000366862 ZBED6P86452 979 aa17.18■□□□□ 0.34
FBXO28-201ENST00000366862 ARHGAP4P98171 946 aa17.18■□□□□ 0.34
FBXO28-201ENST00000366862 REXO1Q8N1G1 1221 aaKnown RBP17.18■□□□□ 0.34
FBXO28-201ENST00000366862 IP6K1Q92551 441 aa17.18■□□□□ 0.34
FBXO28-201ENST00000366862 ZBTB21Q9ULJ3 1066 aa17.18■□□□□ 0.34
FBXO28-201ENST00000366862 LMNB2Q03252 620 aa17.17■□□□□ 0.34
FBXO28-201ENST00000366862 RNF8O76064 485 aa17.17■□□□□ 0.34
FBXO28-201ENST00000366862 ZNF790Q6PG37 636 aa17.17■□□□□ 0.34
FBXO28-201ENST00000366862 OGFOD1Q8N543 542 aa17.17■□□□□ 0.34
FBXO28-201ENST00000366862 LRRC59Q96AG4 307 aaKnown RBP17.17■□□□□ 0.34
FBXO28-201ENST00000366862 ARHGEF10O15013 1369 aa17.17■□□□□ 0.34
FBXO28-201ENST00000366862 MED23Q9ULK4 1368 aa17.17■□□□□ 0.34
FBXO28-201ENST00000366862 MGEA5O60502 916 aa17.17■□□□□ 0.34
FBXO28-201ENST00000366862 LMNB1P20700 586 aa17.17■□□□□ 0.34
FBXO28-201ENST00000366862 C10orf76Q5T2E6 689 aa17.17■□□□□ 0.34
FBXO28-201ENST00000366862 ZNF658Q5TYW1 1059 aaPredicted RBP17.17■□□□□ 0.34
FBXO28-201ENST00000366862 ARHGEF25Q86VW2 580 aa17.17■□□□□ 0.34
FBXO28-201ENST00000366862 ANKRD7Q92527 254 aa17.17■□□□□ 0.34
FBXO28-201ENST00000366862 GPCPD1Q9NPB8 672 aa17.17■□□□□ 0.34
FBXO28-201ENST00000366862 GIPC1O14908 333 aa17.17■□□□□ 0.34
FBXO28-201ENST00000366862 ST13P4Q8IZP2 240 aaPredicted RBP17.17■□□□□ 0.34
FBXO28-201ENST00000366862 NEK9Q8TD19 979 aa17.17■□□□□ 0.34
FBXO28-201ENST00000366862 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.17■□□□□ 0.34
FBXO28-201ENST00000366862 PRDM1O75626 825 aa17.17■□□□□ 0.34
FBXO28-201ENST00000366862 MYL1P05976 194 aa17.17■□□□□ 0.34
FBXO28-201ENST00000366862 C6orf118Q5T5N4 469 aa17.17■□□□□ 0.34
FBXO28-201ENST00000366862 SETDB2Q96T68 719 aa17.17■□□□□ 0.34
FBXO28-201ENST00000366862 KDRP35968 1356 aa17.17■□□□□ 0.34
FBXO28-201ENST00000366862 YTHDC2Q9H6S0 1430 aaKnown RBP17.17■□□□□ 0.34
FBXO28-201ENST00000366862 TRAPPC10P48553 1259 aa17.16■□□□□ 0.34
FBXO28-201ENST00000366862 TBC1D1Q86TI0 1168 aaPredicted RBP17.16■□□□□ 0.34
FBXO28-201ENST00000366862 NHEJ1Q9H9Q4 299 aaPredicted RBP17.16■□□□□ 0.34
FBXO28-201ENST00000366862 PFDN4Q9NQP4 134 aa17.16■□□□□ 0.34
FBXO28-201ENST00000366862 SEMA3EO15041 775 aa17.16■□□□□ 0.34
FBXO28-201ENST00000366862 MFAP3LO75121 409 aa17.16■□□□□ 0.34
FBXO28-201ENST00000366862 ESRRGP62508 458 aa17.16■□□□□ 0.34
FBXO28-201ENST00000366862 MAGOHBQ96A72 148 aaKnown RBP17.16■□□□□ 0.34
FBXO28-201ENST00000366862 OR52Z1P0C646 297 aa17.16■□□□□ 0.34
FBXO28-201ENST00000366862 SLFN14P0C7P3 912 aa17.16■□□□□ 0.34
FBXO28-201ENST00000366862 PPARAQ07869 468 aa17.16■□□□□ 0.34
FBXO28-201ENST00000366862 PDCLQ13371 301 aa17.16■□□□□ 0.34
FBXO28-201ENST00000366862 ARID5BQ14865 1188 aa17.16■□□□□ 0.34
FBXO28-201ENST00000366862 SPATA5Q8NB90 893 aa17.16■□□□□ 0.34
FBXO28-201ENST00000366862 ARMC2Q8NEN0 867 aa17.16■□□□□ 0.34
FBXO28-201ENST00000366862 EDC3Q96F86 508 aaKnown RBP17.16■□□□□ 0.34
FBXO28-201ENST00000366862 CD2APQ9Y5K6 639 aa17.16■□□□□ 0.34
FBXO28-201ENST00000366862 ATP10BO94823 1461 aa17.16■□□□□ 0.34
FBXO28-201ENST00000366862 DKC1O60832 514 aaKnown RBP eCLIP17.16■□□□□ 0.34
FBXO28-201ENST00000366862 KIF23Q02241 960 aaPredicted RBP17.16■□□□□ 0.34
FBXO28-201ENST00000366862 TTC16Q8NEE8 873 aa17.16■□□□□ 0.34
FBXO28-201ENST00000366862 ABTB1Q969K4 478 aaPredicted RBP17.16■□□□□ 0.34
FBXO28-201ENST00000366862 PCDHB13Q9Y5F0 798 aa17.16■□□□□ 0.34
FBXO28-201ENST00000366862 TTC36A6NLP5 189 aa17.15■□□□□ 0.34
FBXO28-201ENST00000366862 ATP5HO75947 161 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms