RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 GIPC1O14908 333 aa10.38□□□□□ -0.75
H3F3A-201ENST00000366813 NPM2Q86SE8 214 aaKnown RBP10.38□□□□□ -0.75
H3F3A-201ENST00000366813 KRTAP19-1Q8IUB9 90 aa10.38□□□□□ -0.75
H3F3A-201ENST00000366813 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.38□□□□□ -0.75
H3F3A-201ENST00000366813 FLAD1Q8NFF5 587 aa10.38□□□□□ -0.75
H3F3A-201ENST00000366813 NETO1Q8TDF5 533 aa10.38□□□□□ -0.75
H3F3A-201ENST00000366813 OSBPL7Q9BZF2 842 aa10.38□□□□□ -0.75
H3F3A-201ENST00000366813 BCL11AQ9H165 835 aa10.38□□□□□ -0.75
H3F3A-201ENST00000366813 PCDHGC5Q9Y5F6 944 aa10.38□□□□□ -0.75
H3F3A-201ENST00000366813 AK5Q9Y6K8 562 aa10.38□□□□□ -0.75
H3F3A-201ENST00000366813 PLEKHG2Q9H7P9 1386 aa10.38□□□□□ -0.75
H3F3A-201ENST00000366813 MRPL58Q14197 206 aaKnown RBP10.37□□□□□ -0.75
H3F3A-201ENST00000366813 PLCL1Q15111 1095 aa10.37□□□□□ -0.75
H3F3A-201ENST00000366813 CBLL1Q75N03 491 aa10.37□□□□□ -0.75
H3F3A-201ENST00000366813 MISP3Q96FF7 219 aa10.37□□□□□ -0.75
H3F3A-201ENST00000366813 RNF181Q9P0P0 153 aa10.37□□□□□ -0.75
H3F3A-201ENST00000366813 PXDNLA1KZ92 1463 aa10.37□□□□□ -0.75
H3F3A-201ENST00000366813 NSD2O96028 1365 aa10.37□□□□□ -0.75
H3F3A-201ENST00000366813 SORBS3O60504 671 aa10.36□□□□□ -0.75
H3F3A-201ENST00000366813 VAMP1P23763 118 aa10.36□□□□□ -0.75
H3F3A-201ENST00000366813 GSTT1P30711 240 aa10.36□□□□□ -0.75
H3F3A-201ENST00000366813 BNIP3Q12983 259 aa10.36□□□□□ -0.75
H3F3A-201ENST00000366813 ZC3H12AQ5D1E8 599 aaKnown RBP10.36□□□□□ -0.75
H3F3A-201ENST00000366813 TPTE2Q6XPS3 522 aa10.36□□□□□ -0.75
H3F3A-201ENST00000366813 FAM181AQ8N9Y4 354 aa10.36□□□□□ -0.75
H3F3A-201ENST00000366813 CEP44Q9C0F1 390 aa10.36□□□□□ -0.75
H3F3A-201ENST00000366813 C12orf49Q9H741 205 aa10.36□□□□□ -0.75
H3F3A-201ENST00000366813 PICK1Q9NRD5 415 aa10.36□□□□□ -0.75
H3F3A-201ENST00000366813 PDE4DIPQ5VU43 2346 aa10.36□□□□□ -0.75
H3F3A-201ENST00000366813 PIK3C2AO00443 1686 aa10.36□□□□□ -0.75
H3F3A-201ENST00000366813 LY75O60449 1722 aa10.36□□□□□ -0.75
H3F3A-201ENST00000366813 PLD6Q8N2A8 252 aaKnown RBP10.35□□□□□ -0.75
H3F3A-201ENST00000366813 RNF214Q8ND24 703 aa10.35□□□□□ -0.75
H3F3A-201ENST00000366813 GPBAR1Q8TDU6 330 aa10.35□□□□□ -0.75
H3F3A-201ENST00000366813 SRCIN1Q9C0H9 1055 aa10.35□□□□□ -0.75
H3F3A-201ENST00000366813 MRS2Q9HD23 443 aa10.35□□□□□ -0.75
H3F3A-201ENST00000366813 ANKRD36BQ8N2N9 1353 aa10.35□□□□□ -0.75
H3F3A-201ENST00000366813 LEFTY1O75610 366 aa10.34□□□□□ -0.75
H3F3A-201ENST00000366813 DPEP1P16444 411 aa10.34□□□□□ -0.75
H3F3A-201ENST00000366813 JUNBP17275 347 aaPredicted RBP10.34□□□□□ -0.75
H3F3A-201ENST00000366813 EIF4BP23588 611 aaKnown RBP10.34□□□□□ -0.75
H3F3A-201ENST00000366813 ERVK-24P63145 666 aa10.34□□□□□ -0.75
H3F3A-201ENST00000366813 ZNF574Q6ZN55 896 aaPredicted RBP10.34□□□□□ -0.75
H3F3A-201ENST00000366813 SPRED2Q7Z698 418 aa10.34□□□□□ -0.75
H3F3A-201ENST00000366813 ISL2Q96A47 359 aa10.34□□□□□ -0.75
H3F3A-201ENST00000366813 NECAB3Q96P71 396 aaPredicted RBP10.34□□□□□ -0.75
H3F3A-201ENST00000366813 TNRC18O15417 2968 aaPredicted RBP10.34□□□□□ -0.75
H3F3A-201ENST00000366813 BTBD11A6QL63 1104 aa10.33□□□□□ -0.76
H3F3A-201ENST00000366813 E9PSI1 815 aa10.33□□□□□ -0.76
H3F3A-201ENST00000366813 HSPA8P11142 646 aaKnown RBP10.33□□□□□ -0.76
H3F3A-201ENST00000366813 VEGFAP15692 232 aaPredicted RBP10.33□□□□□ -0.76
H3F3A-201ENST00000366813 TGFB2P61812 414 aa10.33□□□□□ -0.76
H3F3A-201ENST00000366813 KCNH5Q8NCM2 988 aa10.33□□□□□ -0.76
H3F3A-201ENST00000366813 DUSP23Q9BVJ7 150 aa10.33□□□□□ -0.76
H3F3A-201ENST00000366813 CSADQ9Y600 493 aa10.33□□□□□ -0.76
H3F3A-201ENST00000366813 USP47Q96K76 1375 aa10.33□□□□□ -0.76
H3F3A-201ENST00000366813 NEFMP07197 916 aa10.33□□□□□ -0.76
H3F3A-201ENST00000366813 MMP10P09238 476 aa10.33□□□□□ -0.76
H3F3A-201ENST00000366813 FAM8A1Q9UBU6 413 aa10.33□□□□□ -0.76
H3F3A-201ENST00000366813 VTI1BQ9UEU0 232 aa10.33□□□□□ -0.76
H3F3A-201ENST00000366813 VAV3Q9UKW4 847 aa10.33□□□□□ -0.76
H3F3A-201ENST00000366813 N4BP2Q86UW6 1770 aaPredicted RBP10.32□□□□□ -0.76
H3F3A-201ENST00000366813 ZNF252P-AS1Q0IIN9 211 aa10.32□□□□□ -0.76
H3F3A-201ENST00000366813 LRRC14Q15048 493 aa10.32□□□□□ -0.76
H3F3A-201ENST00000366813 TOP6BLQ8N6T0 577 aa10.32□□□□□ -0.76
H3F3A-201ENST00000366813 C3orf58Q8NDZ4 430 aa10.32□□□□□ -0.76
H3F3A-201ENST00000366813 GRIN3AQ8TCU5 1115 aa10.32□□□□□ -0.76
H3F3A-201ENST00000366813 CNTNAP1P78357 1384 aa10.31□□□□□ -0.76
H3F3A-201ENST00000366813 TNRC6CQ9HCJ0 1690 aaKnown RBP10.31□□□□□ -0.76
H3F3A-201ENST00000366813 BIN1O00499 593 aa10.31□□□□□ -0.76
H3F3A-201ENST00000366813 PRKCQQ04759 706 aa10.31□□□□□ -0.76
H3F3A-201ENST00000366813 IFI16Q16666 785 aaKnown RBP10.31□□□□□ -0.76
H3F3A-201ENST00000366813 ZNF792Q3KQV3 632 aa10.31□□□□□ -0.76
H3F3A-201ENST00000366813 MPRIPQ6WCQ1 1025 aa10.31□□□□□ -0.76
H3F3A-201ENST00000366813 USP54Q70EL1 1684 aa10.31□□□□□ -0.76
H3F3A-201ENST00000366813 PKD1L3Q7Z443 1732 aa10.31□□□□□ -0.76
H3F3A-201ENST00000366813 ANKRD24Q8TF21 1146 aa10.31□□□□□ -0.76
H3F3A-201ENST00000366813 MPHOSPH9Q99550 1183 aa10.31□□□□□ -0.76
H3F3A-201ENST00000366813 MKNK2Q9HBH9 465 aa10.31□□□□□ -0.76
H3F3A-201ENST00000366813 KIAA1551Q9HCM1 1747 aa10.3□□□□□ -0.76
H3F3A-201ENST00000366813 FBXO24O75426 580 aa10.3□□□□□ -0.76
H3F3A-201ENST00000366813 RECKO95980 971 aa10.3□□□□□ -0.76
H3F3A-201ENST00000366813 CTSHP09668 335 aa10.3□□□□□ -0.76
H3F3A-201ENST00000366813 USP17L7P0C7H9 530 aa10.3□□□□□ -0.76
H3F3A-201ENST00000366813 ITGB5P18084 799 aa10.3□□□□□ -0.76
H3F3A-201ENST00000366813 KCNA3P22001 575 aa10.3□□□□□ -0.76
H3F3A-201ENST00000366813 BMP6P22004 513 aa10.3□□□□□ -0.76
H3F3A-201ENST00000366813 AOC3Q16853 763 aa10.3□□□□□ -0.76
H3F3A-201ENST00000366813 PPM1JQ5JR12 505 aa10.3□□□□□ -0.76
H3F3A-201ENST00000366813 CDC37L1Q7L3B6 337 aa10.3□□□□□ -0.76
H3F3A-201ENST00000366813 PPM1HQ9ULR3 514 aa10.3□□□□□ -0.76
H3F3A-201ENST00000366813 QRICH2Q9H0J4 1663 aa10.29□□□□□ -0.76
H3F3A-201ENST00000366813 TMEM265A0A087WTH1 108 aa10.29□□□□□ -0.76
H3F3A-201ENST00000366813 GLTPD2A6NH11 291 aa10.29□□□□□ -0.76
H3F3A-201ENST00000366813 DCDC2CA8MYV0 355 aa10.29□□□□□ -0.76
H3F3A-201ENST00000366813 CD8BP10966 210 aa10.29□□□□□ -0.76
H3F3A-201ENST00000366813 LDLRAD1Q5T700 205 aa10.29□□□□□ -0.76
H3F3A-201ENST00000366813 LLGL2Q6P1M3 1020 aa10.29□□□□□ -0.76
H3F3A-201ENST00000366813 C12orf40Q86WS4 652 aa10.29□□□□□ -0.76
H3F3A-201ENST00000366813 HRASLS5Q96KN8 279 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms