RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 CNPY4Q8N129 248 aa13.24□□□□□ -0.29
CDC42BPA-203ENST00000366766 TRERF1Q96PN7 1200 aa13.24□□□□□ -0.29
CDC42BPA-203ENST00000366766 PLEKHG2Q9H7P9 1386 aa13.24□□□□□ -0.29
CDC42BPA-203ENST00000366766 CCDC125Q86Z20 511 aa13.24□□□□□ -0.29
CDC42BPA-203ENST00000366766 PSMD2Q13200 908 aa13.24□□□□□ -0.29
CDC42BPA-203ENST00000366766 GKAP1Q5VSY0 366 aaPredicted RBP13.24□□□□□ -0.29
CDC42BPA-203ENST00000366766 FAM173BQ6P4H8 233 aa13.24□□□□□ -0.29
CDC42BPA-203ENST00000366766 KCNJ14Q9UNX9 436 aa13.24□□□□□ -0.29
CDC42BPA-203ENST00000366766 SARNPP82979 210 aaKnown RBP13.24□□□□□ -0.29
CDC42BPA-203ENST00000366766 CDC37Q16543 378 aaPredicted RBP13.24□□□□□ -0.29
CDC42BPA-203ENST00000366766 NLRX1Q86UT6 975 aa13.24□□□□□ -0.29
CDC42BPA-203ENST00000366766 HACE1Q8IYU2 909 aa13.24□□□□□ -0.29
CDC42BPA-203ENST00000366766 AZI2Q9H6S1 392 aa13.24□□□□□ -0.29
CDC42BPA-203ENST00000366766 METP08581 1390 aa13.24□□□□□ -0.29
CDC42BPA-203ENST00000366766 STK36Q9NRP7 1315 aa13.24□□□□□ -0.29
CDC42BPA-203ENST00000366766 RGS16O15492 202 aaPredicted RBP13.24□□□□□ -0.29
CDC42BPA-203ENST00000366766 U2AF2P26368 475 aaKnown RBP eCLIP13.24□□□□□ -0.292e-6■■■□□ 19
CDC42BPA-203ENST00000366766 ALCAMQ13740 583 aa13.24□□□□□ -0.29
CDC42BPA-203ENST00000366766 PLIN2Q99541 437 aa13.24□□□□□ -0.29
CDC42BPA-203ENST00000366766 H0YIN7 160 aa13.24□□□□□ -0.29
CDC42BPA-203ENST00000366766 EVI5O60447 810 aa13.24□□□□□ -0.29
CDC42BPA-203ENST00000366766 SARM1Q6SZW1 724 aa13.24□□□□□ -0.29
CDC42BPA-203ENST00000366766 GPBP1Q86WP2 473 aa13.24□□□□□ -0.29
CDC42BPA-203ENST00000366766 SLFN14P0C7P3 912 aa13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 SERTAD1Q9UHV2 236 aa13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 RWDD2AQ9UIY3 292 aa13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 XDHP47989 1333 aa13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 NOP56O00567 594 aaKnown RBP13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 PTGDRQ13258 359 aa13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 NEDD9Q14511 834 aa13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 SH2D4BQ5SQS7 431 aa13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 CCDC117Q8IWD4 279 aaPredicted RBP13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 EXOC8Q8IYI6 725 aa13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 MCUR1Q96AQ8 359 aa13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 ALDH8A1Q9H2A2 487 aaPredicted RBP13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 USP17L12C9JPN9 530 aa13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 USP17L21D6R901 530 aa13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 TYW1BQ6NUM6 668 aa13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 SMC1BQ8NDV3 1235 aa13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 INO80Q9ULG1 1556 aaPredicted RBP13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 PNPLA6Q8IY17 1366 aa13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 KLRF2D3W0D1 207 aa13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 NCAPH2Q6IBW4 605 aa13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 SAP30BPQ9UHR5 308 aaKnown RBP13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 TRPC6Q9Y210 931 aa13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 NPHP4O75161 1426 aaPredicted RBP13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 PRDM1O75626 825 aa13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 ZNF579Q8NAF0 562 aaKnown RBP13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 NSUN7Q8NE18 718 aaKnown RBP13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 CCHCR1Q8TD31 782 aa13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 FAM207AQ9NSI2 230 aaPredicted RBP13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 PPLO60437 1756 aa13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 ERBB3P21860 1342 aa13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 KIF11P52732 1056 aa13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 SPZ1Q9BXG8 430 aa13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 DDX25Q9UHL0 483 aaKnown RBP13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 NEXMIFQ5QGS0 1516 aa13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 GJC1P36383 396 aa13.23□□□□□ -0.29
CDC42BPA-203ENST00000366766 ATP2C2O75185 946 aa13.22□□□□□ -0.29
CDC42BPA-203ENST00000366766 DCAF15Q66K64 600 aa13.22□□□□□ -0.29
CDC42BPA-203ENST00000366766 ZSCAN26Q16670 478 aa13.22□□□□□ -0.29
CDC42BPA-203ENST00000366766 GPATCH11Q8N954 259 aa13.22□□□□□ -0.29
CDC42BPA-203ENST00000366766 FANCLQ9NW38 375 aa13.22□□□□□ -0.29
CDC42BPA-203ENST00000366766 PASKQ96RG2 1323 aa13.22□□□□□ -0.29
CDC42BPA-203ENST00000366766 FKBP3Q00688 224 aaKnown RBP13.22□□□□□ -0.29
CDC42BPA-203ENST00000366766 DMP1Q13316 513 aaPredicted RBP13.22□□□□□ -0.29
CDC42BPA-203ENST00000366766 TRMT1LQ7Z2T5 733 aaKnown RBP13.22□□□□□ -0.29
CDC42BPA-203ENST00000366766 ZNF219Q9P2Y4 722 aaPredicted RBP13.22□□□□□ -0.29
CDC42BPA-203ENST00000366766 ZNF215Q9UL58 517 aaPredicted RBP13.22□□□□□ -0.29
CDC42BPA-203ENST00000366766 ENOX1Q8TC92 643 aaKnown RBP13.22□□□□□ -0.29
CDC42BPA-203ENST00000366766 SLC8A1P32418 973 aa13.22□□□□□ -0.29
CDC42BPA-203ENST00000366766 CTNNA1P35221 906 aaKnown RBP13.22□□□□□ -0.29
CDC42BPA-203ENST00000366766 C1orf112Q9NSG2 853 aa13.22□□□□□ -0.29
CDC42BPA-203ENST00000366766 LCMT1Q9UIC8 334 aa13.22□□□□□ -0.29
CDC42BPA-203ENST00000366766 HEG1Q9ULI3 1381 aa13.22□□□□□ -0.29
CDC42BPA-203ENST00000366766 PPRC1Q5VV67 1664 aaKnown RBP13.22□□□□□ -0.29
CDC42BPA-203ENST00000366766 POLR2BP30876 1174 aaKnown RBP13.22□□□□□ -0.29
CDC42BPA-203ENST00000366766 MAPK8IP1Q9UQF2 711 aa13.22□□□□□ -0.29
CDC42BPA-203ENST00000366766 LRRC63Q05C16 580 aa13.22□□□□□ -0.29
CDC42BPA-203ENST00000366766 BUB1BO60566 1050 aaPredicted RBP13.22□□□□□ -0.29
CDC42BPA-203ENST00000366766 TGFBRAP1Q8WUH2 860 aa13.22□□□□□ -0.29
CDC42BPA-203ENST00000366766 FAM178BQ8IXR5 827 aa13.21□□□□□ -0.29
CDC42BPA-203ENST00000366766 SYMPKQ92797 1274 aaKnown RBP13.21□□□□□ -0.29
CDC42BPA-203ENST00000366766 MMP1P03956 469 aa13.21□□□□□ -0.29
CDC42BPA-203ENST00000366766 COPB1P53618 953 aaKnown RBP13.21□□□□□ -0.29
CDC42BPA-203ENST00000366766 HHATQ5VTY9 493 aa13.21□□□□□ -0.29
CDC42BPA-203ENST00000366766 MYL10Q9BUA6 226 aa13.21□□□□□ -0.29
CDC42BPA-203ENST00000366766 PCDHA4Q9UN74 947 aa13.21□□□□□ -0.29
CDC42BPA-203ENST00000366766 CLTCQ00610 1675 aaKnown RBP13.21□□□□□ -0.29
CDC42BPA-203ENST00000366766 KRIT1O00522 736 aa13.21□□□□□ -0.29
CDC42BPA-203ENST00000366766 ADKP55263 362 aaKnown RBP13.21□□□□□ -0.29
CDC42BPA-203ENST00000366766 JRKLQ9Y4A0 524 aa13.21□□□□□ -0.29
CDC42BPA-203ENST00000366766 WDR17Q8IZU2 1322 aa13.21□□□□□ -0.29
CDC42BPA-203ENST00000366766 GOLGA8QA0A0J9YX86 632 aa13.21□□□□□ -0.29
CDC42BPA-203ENST00000366766 GOLGA8OA6NCC3 632 aa13.21□□□□□ -0.29
CDC42BPA-203ENST00000366766 GOLGA8NF8WBI6 632 aa13.21□□□□□ -0.29
CDC42BPA-203ENST00000366766 LTKP29376 864 aa13.21□□□□□ -0.29
CDC42BPA-203ENST00000366766 SND1Q7KZF4 910 aaKnown RBP eCLIP13.21□□□□□ -0.29
CDC42BPA-203ENST00000366766 VPS52Q8N1B4 723 aa13.21□□□□□ -0.29
CDC42BPA-203ENST00000366766 LINC00301Q8NCQ3 95 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms