RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 RIC8AQ9NPQ8 531 aa13□□□□□ -0.33
CDC42BPA-202ENST00000366764 SLC35F6Q8N357 371 aa13□□□□□ -0.33
CDC42BPA-202ENST00000366764 CTIFO43310 598 aaKnown RBP13□□□□□ -0.33
CDC42BPA-202ENST00000366764 PAF1Q8N7H5 531 aa13□□□□□ -0.33
CDC42BPA-202ENST00000366764 CLIC6Q96NY7 704 aa13□□□□□ -0.33
CDC42BPA-202ENST00000366764 LMNB1P20700 586 aa13□□□□□ -0.33
CDC42BPA-202ENST00000366764 PALLDQ8WX93 1383 aa13□□□□□ -0.33
CDC42BPA-202ENST00000366764 KRIT1O00522 736 aa13□□□□□ -0.33
CDC42BPA-202ENST00000366764 GCFC2P16383 781 aaKnown RBP13□□□□□ -0.33
CDC42BPA-202ENST00000366764 IBSPP21815 317 aaPredicted RBP13□□□□□ -0.33
CDC42BPA-202ENST00000366764 CUL1Q13616 776 aa13□□□□□ -0.33
CDC42BPA-202ENST00000366764 INF2Q27J81 1249 aa13□□□□□ -0.33
CDC42BPA-202ENST00000366764 PRPF3O43395 683 aaKnown RBP13□□□□□ -0.33
CDC42BPA-202ENST00000366764 CIB2O75838 187 aa13□□□□□ -0.33
CDC42BPA-202ENST00000366764 SASH1O94885 1247 aa13□□□□□ -0.33
CDC42BPA-202ENST00000366764 PLCB3Q01970 1234 aa13□□□□□ -0.33
CDC42BPA-202ENST00000366764 ANO9A1A5B4 782 aa13□□□□□ -0.33
CDC42BPA-202ENST00000366764 LRRC63Q05C16 580 aa13□□□□□ -0.33
CDC42BPA-202ENST00000366764 ZNF827Q17R98 1081 aa13□□□□□ -0.33
CDC42BPA-202ENST00000366764 OVOS2A0A0G2JMS6 1433 aa13□□□□□ -0.33
CDC42BPA-202ENST00000366764 HEG1Q9ULI3 1381 aa13□□□□□ -0.33
CDC42BPA-202ENST00000366764 SLC17A8Q8NDX2 589 aa13□□□□□ -0.33
CDC42BPA-202ENST00000366764 ORAI2Q96SN7 254 aa13□□□□□ -0.33
CDC42BPA-202ENST00000366764 SMCO2A6NFE2 343 aa12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 RNF40O75150 1001 aa12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 LUC7L3O95232 432 aaKnown RBP12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 MXRA7P84157 204 aa12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 SLC4A8Q2Y0W8 1093 aa12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 MRPL44Q9H9J2 332 aaKnown RBP12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 FAM114A2Q9NRY5 505 aa12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 MAN2A1Q16706 1144 aa12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 CCDC62Q6P9F0 684 aa12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 PNMA2Q9UL42 364 aa12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 SHPRHQ149N8 1683 aa12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 SLC1A4P43007 532 aa12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 ARHGEF10LQ9HCE6 1279 aa12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 TYW1Q9NV66 732 aaKnown RBP12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 NDUFA10O95299 355 aa12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 ALX1Q15699 326 aa12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 CABLES1Q8TDN4 633 aa12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 CLNS1AP54105 237 aaKnown RBP12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 PSMD2Q13200 908 aa12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 RBM17Q96I25 401 aaKnown RBP12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 LSM14BQ9BX40 385 aaKnown RBP12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 CTTNBP2NLQ9P2B4 639 aa12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 ADAMTS2O95450 1211 aa12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 PGBD1Q96JS3 809 aa12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 TFAP4Q01664 338 aa12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 GRK7Q8WTQ7 553 aa12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 FKBP3Q00688 224 aaKnown RBP12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 LONRF3Q496Y0 759 aa12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 CALR3Q96L12 384 aaKnown RBP12.99□□□□□ -0.33
CDC42BPA-202ENST00000366764 ERVV-1B6SEH8 477 aa12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 PTPREP23469 700 aa12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 CNOT6LQ96LI5 555 aaKnown RBP12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 CPSF2Q9P2I0 782 aaKnown RBP12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 ARHGEF35A5YM69 484 aa12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 LRRC24Q50LG9 513 aa12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 APBB1IPQ7Z5R6 666 aaPredicted RBP12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 ANKRD7Q92527 254 aa12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 CASP8Q14790 479 aa12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 DNAJC10Q8IXB1 793 aa12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 BBOF1Q8ND07 529 aa12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 P2RX5Q93086 422 aa12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 ASIC3Q9UHC3 531 aa12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 CAPN7Q9Y6W3 813 aa12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 TARSL2A2RTX5 802 aaKnown RBP12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 TMEM110-MUSTN1A8MSY1 372 aa12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 EVI5O60447 810 aa12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 RBL2Q08999 1139 aa12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 PPP4R3CPQ6ZMV5 832 aa12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 USP17L12C9JPN9 530 aa12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 USP17L21D6R901 530 aa12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 PCDHB13Q9Y5F0 798 aa12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 HMGB1P1B2RPK0 211 aaPredicted RBP12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 IL6STP40189 918 aaPredicted RBP12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 EIF3BP55884 814 aaKnown RBP12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 SNX16P57768 344 aa12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 CCDC105Q8IYK2 499 aa12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 CARD10Q9BWT7 1032 aa12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 PCDHA4Q9UN74 947 aa12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 PICALMQ13492 652 aa12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 PBKQ96KB5 322 aa12.98□□□□□ -0.33
CDC42BPA-202ENST00000366764 SLIT1O75093 1534 aa12.97□□□□□ -0.33
CDC42BPA-202ENST00000366764 KLHL7Q8IXQ5 586 aa12.97□□□□□ -0.33
CDC42BPA-202ENST00000366764 H2AFZP0C0S5 128 aa12.97□□□□□ -0.33
CDC42BPA-202ENST00000366764 CC2D1AQ6P1N0 951 aaPredicted RBP12.97□□□□□ -0.33
CDC42BPA-202ENST00000366764 H2AFVQ71UI9 128 aa12.97□□□□□ -0.33
CDC42BPA-202ENST00000366764 COL4A3BPQ9Y5P4 624 aa12.97□□□□□ -0.33
CDC42BPA-202ENST00000366764 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.97□□□□□ -0.33
CDC42BPA-202ENST00000366764 GGA1Q9UJY5 639 aa12.97□□□□□ -0.33
CDC42BPA-202ENST00000366764 MYH6P13533 1939 aa12.97□□□□□ -0.33
CDC42BPA-202ENST00000366764 SMIM23A6NLE4 172 aa12.97□□□□□ -0.33
CDC42BPA-202ENST00000366764 RPS8P62241 208 aaKnown RBP12.97□□□□□ -0.33
CDC42BPA-202ENST00000366764 CCDC38Q502W7 563 aa12.97□□□□□ -0.33
CDC42BPA-202ENST00000366764 VCXQ9H320 206 aa12.97□□□□□ -0.33
CDC42BPA-202ENST00000366764 H0YCG3 227 aa12.97□□□□□ -0.33
CDC42BPA-202ENST00000366764 ADORA1P30542 326 aa12.97□□□□□ -0.33
CDC42BPA-202ENST00000366764 PPP1R2P3Q6NXS1 205 aa12.97□□□□□ -0.33
CDC42BPA-202ENST00000366764 TTLL7Q6ZT98 887 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms