RNA–Protein interactions for RNA: ENST00000366739.5

MRPL55-212, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-212ENST00000366739 ANKRD35Q8N283 1001 aa13.7□□□□□ -0.22
MRPL55-212ENST00000366739 ATXN2LQ8WWM7 1075 aaKnown RBP13.7□□□□□ -0.22
MRPL55-212ENST00000366739 ABHD16BQ9H3Z7 469 aa13.7□□□□□ -0.22
MRPL55-212ENST00000366739 CXXC1Q9P0U4 656 aaPredicted RBP13.7□□□□□ -0.22
MRPL55-212ENST00000366739 RAPGEFL1Q9UHV5 662 aa13.7□□□□□ -0.22
MRPL55-212ENST00000366739 CTDP1Q9Y5B0 961 aaPredicted RBP13.7□□□□□ -0.22
MRPL55-212ENST00000366739 BEX3Q00994 111 aa13.69□□□□□ -0.22
MRPL55-212ENST00000366739 CCDC85BQ15834 202 aaPredicted RBP13.69□□□□□ -0.22
MRPL55-212ENST00000366739 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.69□□□□□ -0.22
MRPL55-212ENST00000366739 CCDC144CPQ8IYA2 1237 aa13.69□□□□□ -0.22
MRPL55-212ENST00000366739 ASB2Q96Q27 587 aa13.69□□□□□ -0.22
MRPL55-212ENST00000366739 STRBPQ96SI9 672 aaKnown RBP13.69□□□□□ -0.22
MRPL55-212ENST00000366739 KATNBL1Q9H079 304 aa13.69□□□□□ -0.22
MRPL55-212ENST00000366739 MKNK2Q9HBH9 465 aa13.69□□□□□ -0.22
MRPL55-212ENST00000366739 SLC38A10Q9HBR0 1119 aa13.69□□□□□ -0.22
MRPL55-212ENST00000366739 THEGQ9P2T0 379 aa13.69□□□□□ -0.22
MRPL55-212ENST00000366739 CLIP2Q9UDT6 1046 aa13.69□□□□□ -0.22
MRPL55-212ENST00000366739 IGKV6D-41A0A0C4DH26 115 aa13.68□□□□□ -0.22
MRPL55-212ENST00000366739 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-212ENST00000366739 GSG1L2A8MUP6 293 aa13.68□□□□□ -0.22
MRPL55-212ENST00000366739 MINDY4BA8MYZ0 360 aa13.68□□□□□ -0.22
MRPL55-212ENST00000366739 TLR3O15455 904 aaKnown RBP13.68□□□□□ -0.22
MRPL55-212ENST00000366739 CD4P01730 458 aa13.68□□□□□ -0.22
MRPL55-212ENST00000366739 IGFBP4P22692 258 aa13.68□□□□□ -0.22
MRPL55-212ENST00000366739 CNTN2Q02246 1040 aa13.68□□□□□ -0.22
MRPL55-212ENST00000366739 SBK1Q52WX2 424 aa13.68□□□□□ -0.22
MRPL55-212ENST00000366739 ZSCAN25Q6NSZ9 544 aa13.68□□□□□ -0.22
MRPL55-212ENST00000366739 ADAMTS19Q8TE59 1207 aa13.68□□□□□ -0.22
MRPL55-212ENST00000366739 HERVK_113Q902F9 699 aa13.68□□□□□ -0.22
MRPL55-212ENST00000366739 NKX2-4Q9H2Z4 354 aa13.68□□□□□ -0.22
MRPL55-212ENST00000366739 IL23AQ9NPF7 189 aa13.68□□□□□ -0.22
MRPL55-212ENST00000366739 HOMER2Q9NSB8 354 aa13.68□□□□□ -0.22
MRPL55-212ENST00000366739 ZBTB40Q9NUA8 1239 aa13.68□□□□□ -0.22
MRPL55-212ENST00000366739 MSRAQ9UJ68 235 aa13.68□□□□□ -0.22
MRPL55-212ENST00000366739 YBX2Q9Y2T7 364 aaKnown RBP13.68□□□□□ -0.22
MRPL55-212ENST00000366739 ASTN1O14525 1302 aa13.67□□□□□ -0.22
MRPL55-212ENST00000366739 UMODL1Q5DID0 1318 aa13.67□□□□□ -0.22
MRPL55-212ENST00000366739 PRDM1O75626 825 aa13.67□□□□□ -0.22
MRPL55-212ENST00000366739 PTGS1P23219 599 aa13.67□□□□□ -0.22
MRPL55-212ENST00000366739 NKX3-2P78367 333 aa13.67□□□□□ -0.22
MRPL55-212ENST00000366739 RAB30Q15771 203 aa13.67□□□□□ -0.22
MRPL55-212ENST00000366739 CXCL17Q6UXB2 119 aa13.67□□□□□ -0.22
MRPL55-212ENST00000366739 LRRC47Q8N1G4 583 aaKnown RBP13.67□□□□□ -0.22
MRPL55-212ENST00000366739 CHST13Q8NET6 341 aa13.67□□□□□ -0.22
MRPL55-212ENST00000366739 CEP95Q96GE4 821 aa13.67□□□□□ -0.22
MRPL55-212ENST00000366739 FBXO40Q9UH90 709 aa13.67□□□□□ -0.22
MRPL55-212ENST00000366739 FEM1BQ9UK73 627 aa13.67□□□□□ -0.22
MRPL55-212ENST00000366739 COG6Q9Y2V7 657 aa13.67□□□□□ -0.22
MRPL55-212ENST00000366739 CHD7Q9P2D1 2997 aa13.66□□□□□ -0.22
MRPL55-212ENST00000366739 MCM3APO60318 1980 aa13.66□□□□□ -0.22
MRPL55-212ENST00000366739 FGBP02675 491 aa13.66□□□□□ -0.22
MRPL55-212ENST00000366739 OAZ1P54368 228 aa13.66□□□□□ -0.22
MRPL55-212ENST00000366739 MRPS5P82675 430 aaKnown RBP13.66□□□□□ -0.22
MRPL55-212ENST00000366739 TNFAIP2Q03169 654 aa13.66□□□□□ -0.22
MRPL55-212ENST00000366739 NOL8Q76FK4 1167 aaKnown RBP13.66□□□□□ -0.22
MRPL55-212ENST00000366739 OTOP2Q7RTS6 562 aa13.66□□□□□ -0.22
MRPL55-212ENST00000366739 FAM133AQ8N9E0 248 aa13.66□□□□□ -0.22
MRPL55-212ENST00000366739 SLC43A3Q8NBI5 491 aa13.66□□□□□ -0.22
MRPL55-212ENST00000366739 HIPK3Q9H422 1215 aa13.66□□□□□ -0.22
MRPL55-212ENST00000366739 EPB41L4AQ9HCS5 686 aaPredicted RBP13.66□□□□□ -0.22
MRPL55-212ENST00000366739 DDX49Q9Y6V7 483 aaKnown RBP13.66□□□□□ -0.22
MRPL55-212ENST00000366739 MYH7P12883 1935 aa13.66□□□□□ -0.22
MRPL55-212ENST00000366739 GRIN2DO15399 1336 aa13.65□□□□□ -0.22
MRPL55-212ENST00000366739 SMARCA5O60264 1052 aaPredicted RBP13.65□□□□□ -0.22
MRPL55-212ENST00000366739 RABGGTBP53611 331 aa13.65□□□□□ -0.22
MRPL55-212ENST00000366739 CCL23P55773 120 aa13.65□□□□□ -0.22
MRPL55-212ENST00000366739 GIMAP6Q6P9H5 292 aa13.65□□□□□ -0.22
MRPL55-212ENST00000366739 TLK2Q86UE8 772 aa13.65□□□□□ -0.22
MRPL55-212ENST00000366739 OSBP2Q969R2 916 aa13.65□□□□□ -0.22
MRPL55-212ENST00000366739 MKL1Q969V6 931 aa13.65□□□□□ -0.22
MRPL55-212ENST00000366739 UHRF1Q96T88 793 aaPredicted RBP13.65□□□□□ -0.22
MRPL55-212ENST00000366739 TRPV6Q9H1D0 765 aa13.65□□□□□ -0.22
MRPL55-212ENST00000366739 MTIF3Q9H2K0 278 aaKnown RBP13.65□□□□□ -0.22
MRPL55-212ENST00000366739 SLC28A3Q9HAS3 691 aa13.65□□□□□ -0.22
MRPL55-212ENST00000366739 A1CFQ9NQ94 594 aaKnown RBP13.65□□□□□ -0.22
MRPL55-212ENST00000366739 MTMR4Q9NYA4 1195 aa13.65□□□□□ -0.22
MRPL55-212ENST00000366739 SOWAHBA6NEL2 793 aa13.64□□□□□ -0.23
MRPL55-212ENST00000366739 CABYRO75952 493 aa13.64□□□□□ -0.23
MRPL55-212ENST00000366739 TTLL1O95922 423 aa13.64□□□□□ -0.23
MRPL55-212ENST00000366739 MS4A1P11836 297 aa13.64□□□□□ -0.23
MRPL55-212ENST00000366739 BMP3P12645 472 aa13.64□□□□□ -0.23
MRPL55-212ENST00000366739 ITGA7Q13683 1181 aa13.64□□□□□ -0.23
MRPL55-212ENST00000366739 FSCN1Q16658 493 aaKnown RBP13.64□□□□□ -0.23
MRPL55-212ENST00000366739 SLFN13Q68D06 897 aa13.64□□□□□ -0.23
MRPL55-212ENST00000366739 ZNF444Q8N0Y2 327 aaPredicted RBP13.64□□□□□ -0.23
MRPL55-212ENST00000366739 GMCL1P1Q8NEA9 526 aa13.64□□□□□ -0.23
MRPL55-212ENST00000366739 CHMP4CQ96CF2 233 aa13.64□□□□□ -0.23
MRPL55-212ENST00000366739 AGBL1Q96MI9 1066 aa13.64□□□□□ -0.23
MRPL55-212ENST00000366739 NOC4LQ9BVI4 516 aaKnown RBP13.64□□□□□ -0.23
MRPL55-212ENST00000366739 WNT8AQ9H1J5 351 aa13.64□□□□□ -0.23
MRPL55-212ENST00000366739 ACAD9Q9H845 621 aa13.64□□□□□ -0.23
MRPL55-212ENST00000366739 RNF146Q9NTX7 359 aa13.64□□□□□ -0.23
MRPL55-212ENST00000366739 ISY1Q9ULR0 285 aaKnown RBP13.64□□□□□ -0.23
MRPL55-212ENST00000366739 DDX19BQ9UMR2 479 aa13.64□□□□□ -0.23
MRPL55-212ENST00000366739 GNEQ9Y223 722 aaKnown RBP13.64□□□□□ -0.23
MRPL55-212ENST00000366739 MYO9BQ13459 2157 aa13.64□□□□□ -0.23
MRPL55-212ENST00000366739 TMEM232C9JQI7 657 aa13.63□□□□□ -0.23
MRPL55-212ENST00000366739 DYNC1LI2O43237 492 aaPredicted RBP13.63□□□□□ -0.23
MRPL55-212ENST00000366739 GPAA1O43292 621 aa13.63□□□□□ -0.23
MRPL55-212ENST00000366739 B4GALT4O60513 344 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms