RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 GADD45BO75293 160 aaPredicted RBP18.26■□□□□ 0.51
NID1-202ENST00000366595 MYCLP12524 364 aaPredicted RBP18.26■□□□□ 0.51
NID1-202ENST00000366595 CMA1P23946 247 aa18.26■□□□□ 0.51
NID1-202ENST00000366595 EEF1B2P24534 225 aaKnown RBP18.26■□□□□ 0.51
NID1-202ENST00000366595 EIF3BP55884 814 aaKnown RBP18.26■□□□□ 0.51
NID1-202ENST00000366595 SCYL2Q6P3W7 929 aa18.26■□□□□ 0.51
NID1-202ENST00000366595 DSCC1Q9BVC3 393 aa18.26■□□□□ 0.51
NID1-202ENST00000366595 MAD1L1Q9Y6D9 718 aa18.26■□□□□ 0.51
NID1-202ENST00000366595 ZBTB8OSQ8IWT0 167 aa18.26■□□□□ 0.51
NID1-202ENST00000366595 FAM81BQ96LP2 452 aa18.26■□□□□ 0.51
NID1-202ENST00000366595 HIBADHP31937 336 aaKnown RBP18.26■□□□□ 0.51
NID1-202ENST00000366595 NSFP46459 744 aaKnown RBP18.26■□□□□ 0.51
NID1-202ENST00000366595 DESI2Q9BSY9 194 aa18.26■□□□□ 0.51
NID1-202ENST00000366595 BLZF1Q9H2G9 400 aa18.26■□□□□ 0.51
NID1-202ENST00000366595 E2F5Q15329 346 aa18.25■□□□□ 0.51
NID1-202ENST00000366595 CWF19L2Q2TBE0 894 aaKnown RBP18.25■□□□□ 0.51
NID1-202ENST00000366595 ALS2CLQ60I27 953 aa18.25■□□□□ 0.51
NID1-202ENST00000366595 TRIML2Q8N7C3 387 aa18.25■□□□□ 0.51
NID1-202ENST00000366595 RETREG2Q8NC44 543 aa18.25■□□□□ 0.51
NID1-202ENST00000366595 ARMT1Q9H993 441 aa18.25■□□□□ 0.51
NID1-202ENST00000366595 DAAM1Q9Y4D1 1078 aa18.25■□□□□ 0.51
NID1-202ENST00000366595 PHLPP2Q6ZVD8 1323 aa18.25■□□□□ 0.51
NID1-202ENST00000366595 NOS1P29475 1434 aa18.25■□□□□ 0.51
NID1-202ENST00000366595 PAWRQ96IZ0 340 aaKnown RBP18.25■□□□□ 0.51
NID1-202ENST00000366595 NOP53Q9NZM5 478 aaKnown RBP18.25■□□□□ 0.51
NID1-202ENST00000366595 SOS2Q07890 1332 aaPredicted RBP18.25■□□□□ 0.51
NID1-202ENST00000366595 SSH2Q76I76 1423 aa18.25■□□□□ 0.51
NID1-202ENST00000366595 BUB1O43683 1085 aa18.25■□□□□ 0.51
NID1-202ENST00000366595 HOXB7P09629 217 aa18.25■□□□□ 0.51
NID1-202ENST00000366595 IQCB1Q15051 598 aa18.25■□□□□ 0.51
NID1-202ENST00000366595 GRAMD4Q6IC98 578 aa18.25■□□□□ 0.51
NID1-202ENST00000366595 FAM173BQ6P4H8 233 aa18.25■□□□□ 0.51
NID1-202ENST00000366595 GPBP1Q86WP2 473 aa18.25■□□□□ 0.51
NID1-202ENST00000366595 ZNF274Q96GC6 653 aaPredicted RBP18.25■□□□□ 0.51
NID1-202ENST00000366595 PNMA2Q9UL42 364 aa18.25■□□□□ 0.51
NID1-202ENST00000366595 TRPA1O75762 1119 aa18.25■□□□□ 0.51
NID1-202ENST00000366595 FLT4P35916 1363 aa18.25■□□□□ 0.51
NID1-202ENST00000366595 SLC39A6Q13433 755 aa18.24■□□□□ 0.51
NID1-202ENST00000366595 SLFN12Q8IYM2 578 aa18.24■□□□□ 0.51
NID1-202ENST00000366595 TEKT2Q9UIF3 430 aa18.24■□□□□ 0.51
NID1-202ENST00000366595 RAP1GDS1P52306 607 aa18.24■□□□□ 0.51
NID1-202ENST00000366595 SLC17A8Q8NDX2 589 aa18.24■□□□□ 0.51
NID1-202ENST00000366595 TMEM63CQ9P1W3 806 aa18.24■□□□□ 0.51
NID1-202ENST00000366595 SATB2Q9UPW6 733 aa18.24■□□□□ 0.51
NID1-202ENST00000366595 ZFYVE9O95405 1425 aa18.24■□□□□ 0.51
NID1-202ENST00000366595 CASP2P42575 452 aa18.24■□□□□ 0.51
NID1-202ENST00000366595 MSH2P43246 934 aa18.24■□□□□ 0.51
NID1-202ENST00000366595 DCAF5Q96JK2 942 aa18.24■□□□□ 0.51
NID1-202ENST00000366595 SAP30BPQ9UHR5 308 aaKnown RBP18.24■□□□□ 0.51
NID1-202ENST00000366595 RTCBQ9Y3I0 505 aaKnown RBP18.24■□□□□ 0.51
NID1-202ENST00000366595 PARP3Q9Y6F1 533 aa18.24■□□□□ 0.51
NID1-202ENST00000366595 CCDC151A5D8V7 595 aa18.24■□□□□ 0.51
NID1-202ENST00000366595 POC1B-GALNT4F8VUJ3 575 aa18.24■□□□□ 0.51
NID1-202ENST00000366595 H7C0C1 242 aa18.24■□□□□ 0.51
NID1-202ENST00000366595 ATP5OP48047 213 aa18.24■□□□□ 0.51
NID1-202ENST00000366595 IFNAR2P48551 515 aa18.24■□□□□ 0.51
NID1-202ENST00000366595 PDXDC1Q6P996 788 aa18.24■□□□□ 0.51
NID1-202ENST00000366595 MAEAQ7L5Y9 396 aa18.24■□□□□ 0.51
NID1-202ENST00000366595 A6NJR5 290 aa18.24■□□□□ 0.51
NID1-202ENST00000366595 HNRNPCL2B2RXH8 293 aa18.24■□□□□ 0.51
NID1-202ENST00000366595 CTNND1O60716 968 aaKnown RBP18.24■□□□□ 0.51
NID1-202ENST00000366595 HNRNPCL1O60812 293 aaKnown RBP18.24■□□□□ 0.51
NID1-202ENST00000366595 LRMPQ12912 555 aa18.24■□□□□ 0.51
NID1-202ENST00000366595 N4BP2L2Q92802 583 aaPredicted RBP18.24■□□□□ 0.51
NID1-202ENST00000366595 PLEKHA4Q9H4M7 779 aa18.24■□□□□ 0.51
NID1-202ENST00000366595 STK17AQ9UEE5 414 aa18.24■□□□□ 0.51
NID1-202ENST00000366595 CCPG1Q9ULG6 757 aa18.24■□□□□ 0.51
NID1-202ENST00000366595 COL4A3BPQ9Y5P4 624 aa18.24■□□□□ 0.51
NID1-202ENST00000366595 SBNO1A3KN83 1393 aa18.23■□□□□ 0.51
NID1-202ENST00000366595 ZBTB7BO15156 539 aaPredicted RBP18.23■□□□□ 0.51
NID1-202ENST00000366595 GAS7O60861 476 aa18.23■□□□□ 0.51
NID1-202ENST00000366595 PPP2R5AQ15172 486 aa18.23■□□□□ 0.51
NID1-202ENST00000366595 MAGOHBQ96A72 148 aaKnown RBP18.23■□□□□ 0.51
NID1-202ENST00000366595 FGD4Q96M96 766 aa18.23■□□□□ 0.51
NID1-202ENST00000366595 NBPF9Q3BBW0 867 aa18.23■□□□□ 0.51
NID1-202ENST00000366595 MSH6P52701 1360 aa18.23■□□□□ 0.51
NID1-202ENST00000366595 OTUD7BQ6GQQ9 843 aa18.23■□□□□ 0.51
NID1-202ENST00000366595 RAPH1Q70E73 1250 aa18.23■□□□□ 0.51
NID1-202ENST00000366595 FAM186BQ8IYM0 893 aa18.23■□□□□ 0.51
NID1-202ENST00000366595 CAPN12Q6ZSI9 719 aa18.23■□□□□ 0.51
NID1-202ENST00000366595 MYO1FO00160 1098 aa18.22■□□□□ 0.51
NID1-202ENST00000366595 SEC24BO95487 1268 aa18.22■□□□□ 0.51
NID1-202ENST00000366595 CYP2J2P51589 502 aa18.22■□□□□ 0.51
NID1-202ENST00000366595 POLR2FP61218 127 aaKnown RBP18.22■□□□□ 0.51
NID1-202ENST00000366595 ITKQ08881 620 aa18.22■□□□□ 0.51
NID1-202ENST00000366595 NOSTRINQ8IVI9 506 aa18.22■□□□□ 0.51
NID1-202ENST00000366595 FBXL13Q8NEE6 735 aa18.22■□□□□ 0.51
NID1-202ENST00000366595 TTC1Q99614 292 aa18.22■□□□□ 0.51
NID1-202ENST00000366595 MED10Q9BTT4 135 aa18.22■□□□□ 0.51
NID1-202ENST00000366595 LIG4P49917 911 aa18.22■□□□□ 0.51
NID1-202ENST00000366595 ART3Q13508 389 aa18.22■□□□□ 0.51
NID1-202ENST00000366595 GNPTABQ3T906 1256 aa18.22■□□□□ 0.51
NID1-202ENST00000366595 TRIM60Q495X7 471 aa18.22■□□□□ 0.51
NID1-202ENST00000366595 CUEDC2Q9H467 287 aa18.22■□□□□ 0.51
NID1-202ENST00000366595 ATP5HO75947 161 aa18.22■□□□□ 0.51
NID1-202ENST00000366595 PARD3Q8TEW0 1356 aa18.22■□□□□ 0.51
NID1-202ENST00000366595 FAM96AQ9H5X1 160 aa18.22■□□□□ 0.51
NID1-202ENST00000366595 PGRMC1O00264 195 aaKnown RBP18.22■□□□□ 0.51
NID1-202ENST00000366595 PCYT1AP49585 367 aa18.22■□□□□ 0.51
NID1-202ENST00000366595 KCTD16Q68DU8 428 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms