RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 UQCRFS1P1P0C7P4 283 aa10.38□□□□□ -0.75
HMGB1P39-201ENST00000366304 CST5P28325 142 aaPredicted RBP10.38□□□□□ -0.75
HMGB1P39-201ENST00000366304 AAK1Q2M2I8 961 aa10.38□□□□□ -0.75
HMGB1P39-201ENST00000366304 MB21D1Q8N884 522 aa10.38□□□□□ -0.75
HMGB1P39-201ENST00000366304 REPS2Q8NFH8 660 aa10.38□□□□□ -0.75
HMGB1P39-201ENST00000366304 FGD4Q96M96 766 aa10.38□□□□□ -0.75
HMGB1P39-201ENST00000366304 APBB1O00213 710 aa10.37□□□□□ -0.75
HMGB1P39-201ENST00000366304 CA3P07451 260 aa10.37□□□□□ -0.75
HMGB1P39-201ENST00000366304 CYP2D6P10635 497 aa10.37□□□□□ -0.75
HMGB1P39-201ENST00000366304 USP5P45974 858 aa10.37□□□□□ -0.75
HMGB1P39-201ENST00000366304 CCL23P55773 120 aa10.37□□□□□ -0.75
HMGB1P39-201ENST00000366304 TTLL4Q14679 1199 aa10.37□□□□□ -0.75
HMGB1P39-201ENST00000366304 CCDC174Q6PII3 467 aa10.37□□□□□ -0.75
HMGB1P39-201ENST00000366304 ATF7IPQ6VMQ6 1270 aa10.37□□□□□ -0.75
HMGB1P39-201ENST00000366304 RIOX2Q8IUF8 465 aa10.37□□□□□ -0.75
HMGB1P39-201ENST00000366304 SLC43A3Q8NBI5 491 aa10.37□□□□□ -0.75
HMGB1P39-201ENST00000366304 UPF3AQ9H1J1 476 aaKnown RBP10.37□□□□□ -0.75
HMGB1P39-201ENST00000366304 CABP5Q9NP86 173 aa10.37□□□□□ -0.75
HMGB1P39-201ENST00000366304 TLR7Q9NYK1 1049 aaKnown RBP10.37□□□□□ -0.75
HMGB1P39-201ENST00000366304 ZNF214Q9UL59 606 aaPredicted RBP10.37□□□□□ -0.75
HMGB1P39-201ENST00000366304 NOB1Q9ULX3 412 aaKnown RBP10.37□□□□□ -0.75
HMGB1P39-201ENST00000366304 DIS3Q9Y2L1 958 aaKnown RBP10.37□□□□□ -0.75
HMGB1P39-201ENST00000366304 PCDHA11Q9Y5I1 949 aa10.37□□□□□ -0.75
HMGB1P39-201ENST00000366304 ASTN1O14525 1302 aa10.36□□□□□ -0.75
HMGB1P39-201ENST00000366304 PARP14Q460N5 1801 aa10.36□□□□□ -0.75
HMGB1P39-201ENST00000366304 DNAJC25-GNG10A0A024R161 153 aa10.36□□□□□ -0.75
HMGB1P39-201ENST00000366304 A0A0U1RQG5 324 aaPredicted RBP10.36□□□□□ -0.75
HMGB1P39-201ENST00000366304 LPXNO60711 386 aa10.36□□□□□ -0.75
HMGB1P39-201ENST00000366304 DUSP11O75319 330 aaKnown RBP10.36□□□□□ -0.75
HMGB1P39-201ENST00000366304 C6orf222P0C671 652 aaPredicted RBP10.36□□□□□ -0.75
HMGB1P39-201ENST00000366304 BEX3Q00994 111 aa10.36□□□□□ -0.75
HMGB1P39-201ENST00000366304 NHLH1Q02575 133 aa10.36□□□□□ -0.75
HMGB1P39-201ENST00000366304 PTCD2Q8WV60 388 aaKnown RBP10.36□□□□□ -0.75
HMGB1P39-201ENST00000366304 GLT1D1Q96MS3 346 aa10.36□□□□□ -0.75
HMGB1P39-201ENST00000366304 RIOK1Q9BRS2 568 aaKnown RBP10.36□□□□□ -0.75
HMGB1P39-201ENST00000366304 NOC4LQ9BVI4 516 aaKnown RBP10.36□□□□□ -0.75
HMGB1P39-201ENST00000366304 KATNBL1Q9H079 304 aa10.36□□□□□ -0.75
HMGB1P39-201ENST00000366304 TRPV6Q9H1D0 765 aa10.36□□□□□ -0.75
HMGB1P39-201ENST00000366304 HIPK3Q9H422 1215 aa10.36□□□□□ -0.75
HMGB1P39-201ENST00000366304 ANTXR1Q9H6X2 564 aa10.36□□□□□ -0.75
HMGB1P39-201ENST00000366304 SMC4Q9NTJ3 1288 aa10.36□□□□□ -0.75
HMGB1P39-201ENST00000366304 ZHX1Q9UKY1 873 aaPredicted RBP10.36□□□□□ -0.75
HMGB1P39-201ENST00000366304 FAM184BQ9ULE4 1060 aa10.36□□□□□ -0.75
HMGB1P39-201ENST00000366304 RIPK3Q9Y572 518 aa10.36□□□□□ -0.75
HMGB1P39-201ENST00000366304 MYH1P12882 1939 aa10.36□□□□□ -0.75
HMGB1P39-201ENST00000366304 MROH7Q68CQ1 1323 aa10.35□□□□□ -0.75
HMGB1P39-201ENST00000366304 ZNFX1Q9P2E3 1918 aaKnown RBP10.35□□□□□ -0.75
HMGB1P39-201ENST00000366304 VWA5AO00534 786 aa10.35□□□□□ -0.75
HMGB1P39-201ENST00000366304 MPHOSPH10O00566 681 aaKnown RBP10.35□□□□□ -0.75
HMGB1P39-201ENST00000366304 SLC25A27O95847 323 aa10.35□□□□□ -0.75
HMGB1P39-201ENST00000366304 AKR1B1P15121 316 aa10.35□□□□□ -0.75
HMGB1P39-201ENST00000366304 GJA9P57773 515 aa10.35□□□□□ -0.75
HMGB1P39-201ENST00000366304 TAP1Q03518 808 aa10.35□□□□□ -0.75
HMGB1P39-201ENST00000366304 KCTD2Q14681 263 aa10.35□□□□□ -0.75
HMGB1P39-201ENST00000366304 TNNI3KQ59H18 835 aa10.35□□□□□ -0.75
HMGB1P39-201ENST00000366304 TTC39AQ5SRH9 613 aa10.35□□□□□ -0.75
HMGB1P39-201ENST00000366304 MAMDC4Q6UXC1 1216 aa10.35□□□□□ -0.75
HMGB1P39-201ENST00000366304 MAGEB6Q8N7X4 407 aa10.35□□□□□ -0.75
HMGB1P39-201ENST00000366304 HLA-CQ95604 372 aa10.35□□□□□ -0.75
HMGB1P39-201ENST00000366304 VTI1AQ96AJ9 217 aa10.35□□□□□ -0.75
HMGB1P39-201ENST00000366304 DYNLL2Q96FJ2 89 aa10.35□□□□□ -0.75
HMGB1P39-201ENST00000366304 SCLYQ96I15 445 aa10.35□□□□□ -0.75
HMGB1P39-201ENST00000366304 AGBL1Q96MI9 1066 aa10.35□□□□□ -0.75
HMGB1P39-201ENST00000366304 COG5Q9UP83 839 aa10.35□□□□□ -0.75
HMGB1P39-201ENST00000366304 TNNQ9UQP3 1299 aa10.35□□□□□ -0.75
HMGB1P39-201ENST00000366304 CNPY2Q9Y2B0 182 aa10.35□□□□□ -0.75
HMGB1P39-201ENST00000366304 TMX2Q9Y320 296 aa10.35□□□□□ -0.75
HMGB1P39-201ENST00000366304 DDX49Q9Y6V7 483 aaKnown RBP10.35□□□□□ -0.75
HMGB1P39-201ENST00000366304 FPGT-TNNI3KV9GXZ4 949 aa10.35□□□□□ -0.75
HMGB1P39-201ENST00000366304 BRWD1Q9NSI6 2320 aa10.35□□□□□ -0.75
HMGB1P39-201ENST00000366304 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.34□□□□□ -0.75
HMGB1P39-201ENST00000366304 ZNF316A6NFI3 1004 aaPredicted RBP10.34□□□□□ -0.75
HMGB1P39-201ENST00000366304 PRR33A8MZF0 331 aa10.34□□□□□ -0.75
HMGB1P39-201ENST00000366304 IDH1O75874 414 aaKnown RBP10.34□□□□□ -0.75
HMGB1P39-201ENST00000366304 ATP2A2P16615 1042 aaKnown RBP10.34□□□□□ -0.75
HMGB1P39-201ENST00000366304 STAT3P40763 770 aa10.34□□□□□ -0.75
HMGB1P39-201ENST00000366304 MFSD10Q14728 455 aa10.34□□□□□ -0.75
HMGB1P39-201ENST00000366304 CCDC144BQ3MJ40 725 aa10.34□□□□□ -0.75
HMGB1P39-201ENST00000366304 ALDH1L2Q3SY69 923 aa10.34□□□□□ -0.75
HMGB1P39-201ENST00000366304 GNASQ5JWF2 1037 aa10.34□□□□□ -0.75
HMGB1P39-201ENST00000366304 TMEM63BQ5T3F8 832 aa10.34□□□□□ -0.75
HMGB1P39-201ENST00000366304 CXCL17Q6UXB2 119 aa10.34□□□□□ -0.75
HMGB1P39-201ENST00000366304 TTC6Q86TZ1 520 aa10.34□□□□□ -0.75
HMGB1P39-201ENST00000366304 FBXL18Q96ME1 805 aa10.34□□□□□ -0.75
HMGB1P39-201ENST00000366304 PHOX2BQ99453 314 aa10.34□□□□□ -0.75
HMGB1P39-201ENST00000366304 VCPKMTQ9H867 229 aa10.34□□□□□ -0.75
HMGB1P39-201ENST00000366304 PLSCR2Q9NRY7 297 aa10.34□□□□□ -0.75
HMGB1P39-201ENST00000366304 DBNLQ9UJU6 430 aaKnown RBP10.34□□□□□ -0.75
HMGB1P39-201ENST00000366304 SLC4A7Q9Y6M7 1214 aa10.34□□□□□ -0.75
HMGB1P39-201ENST00000366304 COL11A1P12107 1806 aaPredicted RBP10.34□□□□□ -0.75
HMGB1P39-201ENST00000366304 CACNA1AO00555 2505 aa10.33□□□□□ -0.76
HMGB1P39-201ENST00000366304 B4GALT4O60513 344 aa10.33□□□□□ -0.76
HMGB1P39-201ENST00000366304 PSMC6P62333 389 aa10.33□□□□□ -0.76
HMGB1P39-201ENST00000366304 NKX3-2P78367 333 aa10.33□□□□□ -0.76
HMGB1P39-201ENST00000366304 GRB10Q13322 594 aa10.33□□□□□ -0.76
HMGB1P39-201ENST00000366304 ACVR2BQ13705 512 aa10.33□□□□□ -0.76
HMGB1P39-201ENST00000366304 PCSK9Q8NBP7 692 aaKnown RBP10.33□□□□□ -0.76
HMGB1P39-201ENST00000366304 ARNTL2Q8WYA1 636 aa10.33□□□□□ -0.76
HMGB1P39-201ENST00000366304 ZNF512BQ96KM6 892 aaPredicted RBP10.33□□□□□ -0.76
HMGB1P39-201ENST00000366304 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms