RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 SLC15A2Q16348 729 aa10.36□□□□□ -0.75
YBX3-204ENST00000366290 PLPPR2Q96GM1 343 aa10.36□□□□□ -0.75
YBX3-204ENST00000366290 NACC1Q96RE7 527 aa10.36□□□□□ -0.75
YBX3-204ENST00000366290 KRTAP4-6Q9BYQ5 205 aa10.36□□□□□ -0.75
YBX3-204ENST00000366290 RNF208Q9H0X6 261 aa10.36□□□□□ -0.75
YBX3-204ENST00000366290 BRMS1Q9HCU9 246 aa10.36□□□□□ -0.75
YBX3-204ENST00000366290 PCDHGC5Q9Y5F6 944 aa10.36□□□□□ -0.75
YBX3-204ENST00000366290 KDRP35968 1356 aa10.36□□□□□ -0.75
YBX3-204ENST00000366290 SYNGAP1Q96PV0 1343 aa10.35□□□□□ -0.75
YBX3-204ENST00000366290 MEGF11A6BM72 1044 aa10.35□□□□□ -0.75
YBX3-204ENST00000366290 ATP2B1P20020 1258 aa10.35□□□□□ -0.75
YBX3-204ENST00000366290 HDXQ7Z353 690 aa10.35□□□□□ -0.75
YBX3-204ENST00000366290 ELMO3Q96BJ8 720 aa10.35□□□□□ -0.75
YBX3-204ENST00000366290 SNCAIPQ9Y6H5 919 aa10.35□□□□□ -0.75
YBX3-204ENST00000366290 TOGARAM1Q9Y4F4 1720 aa10.35□□□□□ -0.75
YBX3-204ENST00000366290 ITGB4P16144 1822 aa10.35□□□□□ -0.75
YBX3-204ENST00000366290 GOLGB1Q14789 3259 aaKnown RBP10.34□□□□□ -0.75
YBX3-204ENST00000366290 DCDC2CA8MYV0 355 aa10.34□□□□□ -0.75
YBX3-204ENST00000366290 K7ELQ4 463 aaPredicted RBP10.34□□□□□ -0.75
YBX3-204ENST00000366290 GFRA2O00451 464 aa10.34□□□□□ -0.75
YBX3-204ENST00000366290 MCM4P33991 863 aa10.34□□□□□ -0.75
YBX3-204ENST00000366290 IL13P35225 146 aa10.34□□□□□ -0.75
YBX3-204ENST00000366290 ZC3H12AQ5D1E8 599 aaKnown RBP10.34□□□□□ -0.75
YBX3-204ENST00000366290 AKAP4Q5JQC9 854 aa10.34□□□□□ -0.75
YBX3-204ENST00000366290 CC2D1BQ5T0F9 858 aaKnown RBP10.34□□□□□ -0.75
YBX3-204ENST00000366290 SYT17Q9BSW7 474 aa10.34□□□□□ -0.75
YBX3-204ENST00000366290 POLR3KQ9Y2Y1 108 aaPredicted RBP10.34□□□□□ -0.75
YBX3-204ENST00000366290 ZNF165P49910 485 aa10.33□□□□□ -0.76
YBX3-204ENST00000366290 DOC2BQ14184 412 aa10.33□□□□□ -0.76
YBX3-204ENST00000366290 ADGRE1Q14246 886 aa10.33□□□□□ -0.76
YBX3-204ENST00000366290 REXO1Q8N1G1 1221 aaKnown RBP10.33□□□□□ -0.76
YBX3-204ENST00000366290 AGGF1Q8N302 714 aaeCLIP10.33□□□□□ -0.76
YBX3-204ENST00000366290 UBXN4Q92575 508 aa10.33□□□□□ -0.76
YBX3-204ENST00000366290 SUGCTQ9HAC7 445 aa10.33□□□□□ -0.76
YBX3-204ENST00000366290 CYP4F12Q9HCS2 524 aa10.33□□□□□ -0.76
YBX3-204ENST00000366290 PPP1R9AQ9ULJ8 1098 aa10.33□□□□□ -0.76
YBX3-204ENST00000366290 CSADQ9Y600 493 aa10.33□□□□□ -0.76
YBX3-204ENST00000366290 QSER1Q2KHR3 1735 aa10.33□□□□□ -0.76
YBX3-204ENST00000366290 COL3A1P02461 1466 aaPredicted RBP10.32□□□□□ -0.76
YBX3-204ENST00000366290 F8W735 103 aaPredicted RBP10.32□□□□□ -0.76
YBX3-204ENST00000366290 TMPRSS2O15393 492 aa10.32□□□□□ -0.76
YBX3-204ENST00000366290 GRIN3BO60391 1043 aa10.32□□□□□ -0.76
YBX3-204ENST00000366290 MTHFSP49914 203 aa10.32□□□□□ -0.76
YBX3-204ENST00000366290 ID3Q02535 119 aa10.32□□□□□ -0.76
YBX3-204ENST00000366290 MBTPS1Q14703 1052 aa10.32□□□□□ -0.76
YBX3-204ENST00000366290 GK5Q6ZS86 529 aa10.32□□□□□ -0.76
YBX3-204ENST00000366290 CYFIP1Q7L576 1253 aa10.32□□□□□ -0.76
YBX3-204ENST00000366290 C12orf40Q86WS4 652 aa10.32□□□□□ -0.76
YBX3-204ENST00000366290 TMEM130Q8N3G9 435 aa10.32□□□□□ -0.76
YBX3-204ENST00000366290 SMG8Q8ND04 991 aaKnown RBP10.32□□□□□ -0.76
YBX3-204ENST00000366290 STK32BQ9NY57 414 aa10.32□□□□□ -0.76
YBX3-204ENST00000366290 STRIP2Q9ULQ0 834 aa10.32□□□□□ -0.76
YBX3-204ENST00000366290 PPT2Q9UMR5 302 aa10.32□□□□□ -0.76
YBX3-204ENST00000366290 C9orf172C9J069 976 aa10.31□□□□□ -0.76
YBX3-204ENST00000366290 SSBP05455 408 aaKnown RBP eCLIP10.31□□□□□ -0.76
YBX3-204ENST00000366290 ADH5P11766 374 aa10.31□□□□□ -0.76
YBX3-204ENST00000366290 GTF2F1P35269 517 aaKnown RBP eCLIP10.31□□□□□ -0.76
YBX3-204ENST00000366290 ZNF827Q17R98 1081 aa10.31□□□□□ -0.76
YBX3-204ENST00000366290 AMOTQ4VCS5 1084 aa10.31□□□□□ -0.76
YBX3-204ENST00000366290 IFNL2Q8IZJ0 200 aa10.31□□□□□ -0.76
YBX3-204ENST00000366290 DHX38Q92620 1227 aaKnown RBP10.31□□□□□ -0.76
YBX3-204ENST00000366290 LENG1Q96BZ8 264 aaPredicted RBP10.31□□□□□ -0.76
YBX3-204ENST00000366290 MTFR1LQ9H019 292 aa10.31□□□□□ -0.76
YBX3-204ENST00000366290 TPSG1Q9NRR2 321 aa10.31□□□□□ -0.76
YBX3-204ENST00000366290 AP4E1Q9UPM8 1137 aa10.31□□□□□ -0.76
YBX3-204ENST00000366290 PCDHB14Q9Y5E9 798 aa10.31□□□□□ -0.76
YBX3-204ENST00000366290 ALX3O95076 343 aa10.3□□□□□ -0.76
YBX3-204ENST00000366290 PHKG2P15735 406 aa10.3□□□□□ -0.76
YBX3-204ENST00000366290 ITGB7P26010 798 aa10.3□□□□□ -0.76
YBX3-204ENST00000366290 ERVK-24P63145 666 aa10.3□□□□□ -0.76
YBX3-204ENST00000366290 CLCQ05315 142 aa10.3□□□□□ -0.76
YBX3-204ENST00000366290 CCDC81Q6ZN84 652 aa10.3□□□□□ -0.76
YBX3-204ENST00000366290 ARMC5Q96C12 935 aa10.3□□□□□ -0.76
YBX3-204ENST00000366290 FERD3LQ96RJ6 166 aa10.3□□□□□ -0.76
YBX3-204ENST00000366290 SRRTQ9BXP5 876 aaKnown RBP10.3□□□□□ -0.76
YBX3-204ENST00000366290 AKTIPQ9H8T0 292 aa10.3□□□□□ -0.76
YBX3-204ENST00000366290 CRIM1Q9NZV1 1036 aa10.3□□□□□ -0.76
YBX3-204ENST00000366290 HIF3AQ9Y2N7 669 aa10.3□□□□□ -0.76
YBX3-204ENST00000366290 TACC3Q9Y6A5 838 aa10.3□□□□□ -0.76
YBX3-204ENST00000366290 TAF1LQ8IZX4 1826 aa10.29□□□□□ -0.76
YBX3-204ENST00000366290 PRAMEF27A3QJZ7 478 aa10.29□□□□□ -0.76
YBX3-204ENST00000366290 TIAF1O95411 115 aa10.29□□□□□ -0.76
YBX3-204ENST00000366290 HMGB2P26583 209 aaKnown RBP10.29□□□□□ -0.76
YBX3-204ENST00000366290 RING1Q06587 406 aa10.29□□□□□ -0.76
YBX3-204ENST00000366290 SOX4Q06945 474 aaPredicted RBP10.29□□□□□ -0.76
YBX3-204ENST00000366290 CNGB1Q14028 1251 aaPredicted RBP10.29□□□□□ -0.76
YBX3-204ENST00000366290 PLEKHO1Q53GL0 409 aaPredicted RBP10.29□□□□□ -0.76
YBX3-204ENST00000366290 PPM1JQ5JR12 505 aa10.29□□□□□ -0.76
YBX3-204ENST00000366290 FDX2Q6P4F2 183 aa10.29□□□□□ -0.76
YBX3-204ENST00000366290 C12orf50Q8NA57 414 aaPredicted RBP10.29□□□□□ -0.76
YBX3-204ENST00000366290 CPLX3Q8WVH0 158 aa10.29□□□□□ -0.76
YBX3-204ENST00000366290 SYTL4Q96C24 671 aaPredicted RBP10.29□□□□□ -0.76
YBX3-204ENST00000366290 EHMT1Q9H9B1 1298 aa10.29□□□□□ -0.76
YBX3-204ENST00000366290 ZNRF3Q9ULT6 936 aa10.29□□□□□ -0.76
YBX3-204ENST00000366290 CORINQ9Y5Q5 1042 aa10.29□□□□□ -0.76
YBX3-204ENST00000366290 COL24A1Q17RW2 1714 aa10.29□□□□□ -0.76
YBX3-204ENST00000366290 ZNF831Q5JPB2 1677 aa10.28□□□□□ -0.76
YBX3-204ENST00000366290 ERVV-2B6SEH9 535 aa10.28□□□□□ -0.76
YBX3-204ENST00000366290 DIAPH1O60610 1272 aaKnown RBP10.28□□□□□ -0.76
YBX3-204ENST00000366290 ATE1O95260 518 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms