RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 SYDE2Q5VT97 1194 aa12.18□□□□□ -0.46
YBX3-203ENST00000366286 ANO1Q5XXA6 986 aa12.18□□□□□ -0.46
YBX3-203ENST00000366286 BTNL9Q6UXG8 535 aa12.18□□□□□ -0.46
YBX3-203ENST00000366286 IQCA1Q86XH1 822 aa12.18□□□□□ -0.46
YBX3-203ENST00000366286 ANKRD35Q8N283 1001 aa12.18□□□□□ -0.46
YBX3-203ENST00000366286 DDX11Q96FC9 970 aa12.18□□□□□ -0.46
YBX3-203ENST00000366286 TINF2Q9BSI4 451 aa12.18□□□□□ -0.46
YBX3-203ENST00000366286 KRT23Q9C075 422 aa12.18□□□□□ -0.46
YBX3-203ENST00000366286 RANBP17Q9H2T7 1088 aaKnown RBP12.18□□□□□ -0.46
YBX3-203ENST00000366286 ACAD9Q9H845 621 aa12.18□□□□□ -0.46
YBX3-203ENST00000366286 CNNM2Q9H8M5 875 aa12.18□□□□□ -0.46
YBX3-203ENST00000366286 RNF146Q9NTX7 359 aa12.18□□□□□ -0.46
YBX3-203ENST00000366286 FBXO40Q9UH90 709 aa12.18□□□□□ -0.46
YBX3-203ENST00000366286 LTBP2Q14767 1821 aa12.18□□□□□ -0.46
YBX3-203ENST00000366286 DNAH12Q6ZR08 3092 aa12.17□□□□□ -0.46
YBX3-203ENST00000366286 TNKSO95271 1327 aa12.17□□□□□ -0.46
YBX3-203ENST00000366286 SNHG28P0DPA3 235 aa12.17□□□□□ -0.46
YBX3-203ENST00000366286 COL6A1P12109 1028 aa12.17□□□□□ -0.46
YBX3-203ENST00000366286 ALAS1P13196 640 aa12.17□□□□□ -0.46
YBX3-203ENST00000366286 ZNF543Q08ER8 600 aa12.17□□□□□ -0.46
YBX3-203ENST00000366286 TKFCQ3LXA3 575 aa12.17□□□□□ -0.46
YBX3-203ENST00000366286 DGKHQ86XP1 1220 aa12.17□□□□□ -0.46
YBX3-203ENST00000366286 ENAHQ8N8S7 591 aaPredicted RBP12.17□□□□□ -0.46
YBX3-203ENST00000366286 FGD4Q96M96 766 aa12.17□□□□□ -0.46
YBX3-203ENST00000366286 ZSCAN10Q96SZ4 725 aaPredicted RBP12.17□□□□□ -0.46
YBX3-203ENST00000366286 ZSWIM5Q9P217 1185 aa12.17□□□□□ -0.46
YBX3-203ENST00000366286 NRBP1Q9UHY1 535 aa12.17□□□□□ -0.46
YBX3-203ENST00000366286 CCPG1Q9ULG6 757 aa12.17□□□□□ -0.46
YBX3-203ENST00000366286 SYNGAP1Q96PV0 1343 aa12.16□□□□□ -0.46
YBX3-203ENST00000366286 EVI5O60447 810 aa12.16□□□□□ -0.46
YBX3-203ENST00000366286 ICAM1P05362 532 aa12.16□□□□□ -0.46
YBX3-203ENST00000366286 CYP21A2P08686 494 aa12.16□□□□□ -0.46
YBX3-203ENST00000366286 CCDC178Q5BJE1 867 aa12.16□□□□□ -0.46
YBX3-203ENST00000366286 MUM1L1Q5H9M0 696 aa12.16□□□□□ -0.46
YBX3-203ENST00000366286 ZNF467Q7Z7K2 595 aaPredicted RBP12.16□□□□□ -0.46
YBX3-203ENST00000366286 C7orf61Q8IZ16 206 aa12.16□□□□□ -0.46
YBX3-203ENST00000366286 PNMA1Q8ND90 353 aa12.16□□□□□ -0.46
YBX3-203ENST00000366286 TRERF1Q96PN7 1200 aa12.16□□□□□ -0.46
YBX3-203ENST00000366286 UBAC1Q9BSL1 405 aa12.16□□□□□ -0.46
YBX3-203ENST00000366286 KAT14Q9H8E8 782 aa12.16□□□□□ -0.46
YBX3-203ENST00000366286 A1CFQ9NQ94 594 aaKnown RBP12.16□□□□□ -0.46
YBX3-203ENST00000366286 TAF6LQ9Y6J9 622 aa12.16□□□□□ -0.46
YBX3-203ENST00000366286 U3KPZ7 1027 aaPredicted RBP12.16□□□□□ -0.46
YBX3-203ENST00000366286 DNM1LO00429 736 aa12.15□□□□□ -0.46
YBX3-203ENST00000366286 ZNF865P0CJ78 1059 aaPredicted RBP12.15□□□□□ -0.46
YBX3-203ENST00000366286 GOLGA8HP0CJ92 632 aa12.15□□□□□ -0.46
YBX3-203ENST00000366286 CNTN2Q02246 1040 aa12.15□□□□□ -0.46
YBX3-203ENST00000366286 GPATCH4Q5T3I0 446 aaKnown RBP12.15□□□□□ -0.46
YBX3-203ENST00000366286 GJC2Q5T442 439 aaPredicted RBP12.15□□□□□ -0.46
YBX3-203ENST00000366286 MAMDC4Q6UXC1 1216 aa12.15□□□□□ -0.46
YBX3-203ENST00000366286 CYB5R4Q7L1T6 521 aa12.15□□□□□ -0.46
YBX3-203ENST00000366286 MSL3Q8N5Y2 521 aaKnown RBP12.15□□□□□ -0.46
YBX3-203ENST00000366286 ANKS1AQ92625 1134 aa12.15□□□□□ -0.46
YBX3-203ENST00000366286 LENG1Q96BZ8 264 aaPredicted RBP12.15□□□□□ -0.46
YBX3-203ENST00000366286 CPVLQ9H3G5 476 aa12.15□□□□□ -0.46
YBX3-203ENST00000366286 CNPY2Q9Y2B0 182 aa12.15□□□□□ -0.46
YBX3-203ENST00000366286 NR2E3Q9Y5X4 410 aa12.15□□□□□ -0.46
YBX3-203ENST00000366286 CEP290O15078 2479 aa12.14□□□□□ -0.47
YBX3-203ENST00000366286 POTEB2H3BUK9 544 aa12.14□□□□□ -0.47
YBX3-203ENST00000366286 SNAI1O95863 264 aaPredicted RBP12.14□□□□□ -0.47
YBX3-203ENST00000366286 AKR1A1P14550 325 aa12.14□□□□□ -0.47
YBX3-203ENST00000366286 TRDNQ13061 729 aa12.14□□□□□ -0.47
YBX3-203ENST00000366286 SEC23AQ15436 765 aa12.14□□□□□ -0.47
YBX3-203ENST00000366286 LRRC26Q2I0M4 334 aa12.14□□□□□ -0.47
YBX3-203ENST00000366286 BMP2KLQ5H9B9 411 aa12.14□□□□□ -0.47
YBX3-203ENST00000366286 IFIT1BQ5T764 474 aaKnown RBP12.14□□□□□ -0.47
YBX3-203ENST00000366286 STOX1Q6ZVD7 989 aa12.14□□□□□ -0.47
YBX3-203ENST00000366286 ARMCX2Q7L311 632 aa12.14□□□□□ -0.47
YBX3-203ENST00000366286 FAM133AQ8N9E0 248 aa12.14□□□□□ -0.47
YBX3-203ENST00000366286 MAP4K1Q92918 833 aa12.14□□□□□ -0.47
YBX3-203ENST00000366286 ESYT1Q9BSJ8 1104 aa12.14□□□□□ -0.47
YBX3-203ENST00000366286 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.14□□□□□ -0.47
YBX3-203ENST00000366286 CYP39A1Q9NYL5 469 aa12.14□□□□□ -0.47
YBX3-203ENST00000366286 ZHX1Q9UKY1 873 aaPredicted RBP12.14□□□□□ -0.47
YBX3-203ENST00000366286 COLQQ9Y215 455 aaPredicted RBP12.14□□□□□ -0.47
YBX3-203ENST00000366286 RBM8AQ9Y5S9 174 aaKnown RBP12.14□□□□□ -0.47
YBX3-203ENST00000366286 ASTN1O14525 1302 aa12.13□□□□□ -0.47
YBX3-203ENST00000366286 KIAA1217Q5T5P2 1943 aa12.13□□□□□ -0.47
YBX3-203ENST00000366286 KBTBD13C9JR72 458 aa12.13□□□□□ -0.47
YBX3-203ENST00000366286 E7EWF7 191 aa12.13□□□□□ -0.47
YBX3-203ENST00000366286 NFIBO00712 420 aa12.13□□□□□ -0.47
YBX3-203ENST00000366286 MYCNP04198 464 aaPredicted RBP12.13□□□□□ -0.47
YBX3-203ENST00000366286 RARBP10826 455 aa12.13□□□□□ -0.47
YBX3-203ENST00000366286 LRRC41Q15345 812 aa12.13□□□□□ -0.47
YBX3-203ENST00000366286 ASPRV1Q53RT3 343 aa12.13□□□□□ -0.47
YBX3-203ENST00000366286 CHRDL2Q6WN34 429 aa12.13□□□□□ -0.47
YBX3-203ENST00000366286 NSMFQ6X4W1 530 aa12.13□□□□□ -0.47
YBX3-203ENST00000366286 CCDC144CPQ8IYA2 1237 aa12.13□□□□□ -0.47
YBX3-203ENST00000366286 ARRDC4Q8NCT1 418 aa12.13□□□□□ -0.47
YBX3-203ENST00000366286 CCDC136Q96JN2 1154 aa12.13□□□□□ -0.47
YBX3-203ENST00000366286 SENP6Q9GZR1 1112 aaPredicted RBP12.13□□□□□ -0.47
YBX3-203ENST00000366286 UBA5Q9GZZ9 404 aa12.13□□□□□ -0.47
YBX3-203ENST00000366286 LSG1Q9H089 658 aaKnown RBP12.13□□□□□ -0.47
YBX3-203ENST00000366286 XPNPEP3Q9NQH7 507 aa12.13□□□□□ -0.47
YBX3-203ENST00000366286 WDR19Q8NEZ3 1342 aa12.12□□□□□ -0.47
YBX3-203ENST00000366286 SOWAHBA6NEL2 793 aa12.12□□□□□ -0.47
YBX3-203ENST00000366286 ADCY6O43306 1168 aa12.12□□□□□ -0.47
YBX3-203ENST00000366286 PGK1P00558 417 aa12.12□□□□□ -0.47
YBX3-203ENST00000366286 PARP1P09874 1014 aaKnown RBP12.12□□□□□ -0.47
YBX3-203ENST00000366286 ACVR2BQ13705 512 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms