RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 ZDHHC15Q96MV8 337 aa5.31□□□□□ -1.56
RNU6-28P-201ENST00000362378 DSCC1Q9BVC3 393 aa5.31□□□□□ -1.56
RNU6-28P-201ENST00000362378 HDAC8Q9BY41 377 aa5.31□□□□□ -1.56
RNU6-28P-201ENST00000362378 ASCC2Q9H1I8 757 aaPredicted RBP5.31□□□□□ -1.56
RNU6-28P-201ENST00000362378 SHISA3A0PJX4 238 aa5.3□□□□□ -1.56
RNU6-28P-201ENST00000362378 FAM170BA6NMN3 283 aa5.3□□□□□ -1.56
RNU6-28P-201ENST00000362378 H0Y8X5 98 aa5.3□□□□□ -1.56
RNU6-28P-201ENST00000362378 IRS4O14654 1257 aaPredicted RBP5.3□□□□□ -1.56
RNU6-28P-201ENST00000362378 EFCAB14O75071 495 aa5.3□□□□□ -1.56
RNU6-28P-201ENST00000362378 VAMP4O75379 141 aa5.3□□□□□ -1.56
RNU6-28P-201ENST00000362378 MYCLP1P12525 358 aaPredicted RBP5.3□□□□□ -1.56
RNU6-28P-201ENST00000362378 CTSKP43235 329 aa5.3□□□□□ -1.56
RNU6-28P-201ENST00000362378 GATA4P43694 442 aa5.3□□□□□ -1.56
RNU6-28P-201ENST00000362378 POU4F1Q01851 419 aa5.3□□□□□ -1.56
RNU6-28P-201ENST00000362378 NTRK3Q16288 839 aa5.3□□□□□ -1.56
RNU6-28P-201ENST00000362378 RNF43Q68DV7 783 aa5.3□□□□□ -1.56
RNU6-28P-201ENST00000362378 RPUSD2Q8IZ73 545 aaKnown RBP5.3□□□□□ -1.56
RNU6-28P-201ENST00000362378 SHISA5Q8N114 240 aa5.3□□□□□ -1.56
RNU6-28P-201ENST00000362378 ZNF655Q8N720 491 aaPredicted RBP5.3□□□□□ -1.56
RNU6-28P-201ENST00000362378 TMEM145Q8NBT3 493 aa5.3□□□□□ -1.56
RNU6-28P-201ENST00000362378 SLC7A14Q8TBB6 771 aa5.3□□□□□ -1.56
RNU6-28P-201ENST00000362378 PTPRN2Q92932 1015 aa5.3□□□□□ -1.56
RNU6-28P-201ENST00000362378 TP53INP1Q96A56 240 aa5.3□□□□□ -1.56
RNU6-28P-201ENST00000362378 DUSP15Q9H1R2 295 aaPredicted RBP5.3□□□□□ -1.56
RNU6-28P-201ENST00000362378 CAAP1Q9H8G2 361 aa5.3□□□□□ -1.56
RNU6-28P-201ENST00000362378 MKNK2Q9HBH9 465 aa5.3□□□□□ -1.56
RNU6-28P-201ENST00000362378 TRIM39Q9HCM9 518 aa5.3□□□□□ -1.56
RNU6-28P-201ENST00000362378 MAGEC2Q9UBF1 373 aaPredicted RBP5.3□□□□□ -1.56
RNU6-28P-201ENST00000362378 SFMBT1Q9UHJ3 866 aa5.3□□□□□ -1.56
RNU6-28P-201ENST00000362378 GPR55Q9Y2T6 319 aaPredicted RBP5.3□□□□□ -1.56
RNU6-28P-201ENST00000362378 GNAT3A8MTJ3 354 aa5.29□□□□□ -1.56
RNU6-28P-201ENST00000362378 GSG1L2A8MUP6 293 aa5.29□□□□□ -1.56
RNU6-28P-201ENST00000362378 F13BP05160 661 aa5.29□□□□□ -1.56
RNU6-28P-201ENST00000362378 SNRPB2P08579 225 aaKnown RBP5.29□□□□□ -1.56
RNU6-28P-201ENST00000362378 SDSP20132 328 aa5.29□□□□□ -1.56
RNU6-28P-201ENST00000362378 BMP8BP34820 402 aa5.29□□□□□ -1.56
RNU6-28P-201ENST00000362378 OXCT1P55809 520 aa5.29□□□□□ -1.56
RNU6-28P-201ENST00000362378 TESK1Q15569 626 aa5.29□□□□□ -1.56
RNU6-28P-201ENST00000362378 DUSP27Q5VZP5 1158 aa5.29□□□□□ -1.56
RNU6-28P-201ENST00000362378 ZNF765Q7L2R6 523 aa5.29□□□□□ -1.56
RNU6-28P-201ENST00000362378 MAMDC2Q7Z304 686 aaPredicted RBP5.29□□□□□ -1.56
RNU6-28P-201ENST00000362378 KREMEN2Q8NCW0 462 aa5.29□□□□□ -1.56
RNU6-28P-201ENST00000362378 CHAC2Q8WUX2 184 aa5.29□□□□□ -1.56
RNU6-28P-201ENST00000362378 COPS5Q92905 334 aa5.29□□□□□ -1.56
RNU6-28P-201ENST00000362378 MFSD14AQ96MC6 490 aa5.29□□□□□ -1.56
RNU6-28P-201ENST00000362378 MCMBPQ9BTE3 642 aa5.29□□□□□ -1.56
RNU6-28P-201ENST00000362378 SLC52A2Q9HAB3 445 aa5.29□□□□□ -1.56
RNU6-28P-201ENST00000362378 MINPP1Q9UNW1 487 aa5.29□□□□□ -1.56
RNU6-28P-201ENST00000362378 MAPRE3Q9UPY8 281 aa5.29□□□□□ -1.56
RNU6-28P-201ENST00000362378 ST14Q9Y5Y6 855 aa5.29□□□□□ -1.56
RNU6-28P-201ENST00000362378 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 AURKAO14965 403 aa5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 PDE8AO60658 829 aa5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 RAB11FIP3O75154 756 aa5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 DNAJC8O75937 253 aaPredicted RBP5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 POU3F3P20264 500 aaPredicted RBP5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 POU3F2P20265 443 aaPredicted RBP5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 SOX5P35711 763 aa5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 NOP2P46087 812 aaKnown RBP5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 KCNJ6P48051 423 aa5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 NKPD1Q17RQ9 610 aa5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 CLEC16AQ2KHT3 1053 aa5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 ACBD5Q5T8D3 534 aaPredicted RBP5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 CWF19L1Q69YN2 538 aaKnown RBP5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 DENND5AQ6IQ26 1287 aa5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 STYK1Q6J9G0 422 aa5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 BRAPQ7Z569 592 aa5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 RNF180Q86T96 592 aa5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 LRRTM3Q86VH5 581 aa5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 NPLOC4Q8TAT6 608 aa5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 DCAF4Q8WV16 495 aa5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 DDX1Q92499 740 aaKnown RBP5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 TCTN2Q96GX1 697 aa5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 DBNDD2Q9BQY9 259 aa5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 TRIT1Q9H3H1 467 aaKnown RBP5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 GPATCH2Q9NW75 528 aa5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 NDOR1Q9UHB4 597 aa5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 RNF112Q9ULX5 631 aa5.28□□□□□ -1.56
RNU6-28P-201ENST00000362378 BLACEA4D250 179 aa5.27□□□□□ -1.57
RNU6-28P-201ENST00000362378 FAM83GA6ND36 823 aa5.27□□□□□ -1.57
RNU6-28P-201ENST00000362378 FAM155AB1AL88 458 aaPredicted RBP5.27□□□□□ -1.57
RNU6-28P-201ENST00000362378 MEIS1O00470 390 aa5.27□□□□□ -1.57
RNU6-28P-201ENST00000362378 VAV1P15498 845 aa5.27□□□□□ -1.57
RNU6-28P-201ENST00000362378 ECI1P42126 302 aa5.27□□□□□ -1.57
RNU6-28P-201ENST00000362378 SCRN1Q12765 414 aa5.27□□□□□ -1.57
RNU6-28P-201ENST00000362378 NFIAQ12857 509 aa5.27□□□□□ -1.57
RNU6-28P-201ENST00000362378 CPSF6Q16630 551 aaKnown RBP eCLIP5.27□□□□□ -1.57
RNU6-28P-201ENST00000362378 PRSS53Q2L4Q9 553 aa5.27□□□□□ -1.57
RNU6-28P-201ENST00000362378 DPY19L1Q2PZI1 675 aa5.27□□□□□ -1.57
RNU6-28P-201ENST00000362378 RCSD1Q6JBY9 416 aa5.27□□□□□ -1.57
RNU6-28P-201ENST00000362378 CRTC3Q6UUV7 619 aa5.27□□□□□ -1.57
RNU6-28P-201ENST00000362378 THAP5Q7Z6K1 395 aa5.27□□□□□ -1.57
RNU6-28P-201ENST00000362378 TSPYL5Q86VY4 417 aaPredicted RBP5.27□□□□□ -1.57
RNU6-28P-201ENST00000362378 FBXL6Q8N531 539 aa5.27□□□□□ -1.57
RNU6-28P-201ENST00000362378 LINC00116Q8NCU8 138 aa5.27□□□□□ -1.57
RNU6-28P-201ENST00000362378 FRS2Q8WU20 508 aa5.27□□□□□ -1.57
RNU6-28P-201ENST00000362378 SCLYQ96I15 445 aa5.27□□□□□ -1.57
RNU6-28P-201ENST00000362378 FCRL3Q96P31 734 aaPredicted RBP5.27□□□□□ -1.57
RNU6-28P-201ENST00000362378 METTL22Q9BUU2 404 aaPredicted RBP5.27□□□□□ -1.57
RNU6-28P-201ENST00000362378 TARS2Q9BW92 718 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms