RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 NARFQ9UHQ1 456 aa20.54■□□□□ 0.88
CLIP2-202ENST00000361545 KIAA1024Q9UPX6 916 aa20.54■□□□□ 0.88
CLIP2-202ENST00000361545 ZBTB16Q05516 673 aa20.53■□□□□ 0.88
CLIP2-202ENST00000361545 EP400NLQ6ZTU2 488 aa20.53■□□□□ 0.88
CLIP2-202ENST00000361545 TMTC1Q8IUR5 882 aa20.53■□□□□ 0.88
CLIP2-202ENST00000361545 KRT222Q8N1A0 295 aa20.53■□□□□ 0.88
CLIP2-202ENST00000361545 ANKFY1Q9P2R3 1169 aa20.53■□□□□ 0.88
CLIP2-202ENST00000361545 PCDHA7Q9UN72 937 aa20.53■□□□□ 0.88
CLIP2-202ENST00000361545 CDC42BPGQ6DT37 1551 aa20.53■□□□□ 0.88
CLIP2-202ENST00000361545 PKP1Q13835 747 aa20.53■□□□□ 0.88
CLIP2-202ENST00000361545 PPP2R5DQ14738 602 aa20.53■□□□□ 0.88
CLIP2-202ENST00000361545 C6orf163Q5TEZ5 329 aa20.53■□□□□ 0.88
CLIP2-202ENST00000361545 FBF1Q8TES7 1133 aa20.53■□□□□ 0.88
CLIP2-202ENST00000361545 KCNQ2O43526 872 aa20.53■□□□□ 0.88
CLIP2-202ENST00000361545 TMOD1P28289 359 aa20.53■□□□□ 0.88
CLIP2-202ENST00000361545 DMP1Q13316 513 aaPredicted RBP20.53■□□□□ 0.88
CLIP2-202ENST00000361545 COA7Q96BR5 231 aa20.53■□□□□ 0.88
CLIP2-202ENST00000361545 TTLL3Q9Y4R7 772 aa20.53■□□□□ 0.88
CLIP2-202ENST00000361545 CEP104O60308 925 aa20.52■□□□□ 0.88
CLIP2-202ENST00000361545 GNA14O95837 355 aa20.52■□□□□ 0.88
CLIP2-202ENST00000361545 EEPD1Q7L9B9 569 aa20.52■□□□□ 0.88
CLIP2-202ENST00000361545 ZNF577Q9BSK1 485 aa20.52■□□□□ 0.88
CLIP2-202ENST00000361545 CALCOCO1Q9P1Z2 691 aa20.52■□□□□ 0.88
CLIP2-202ENST00000361545 COL4A3BPQ9Y5P4 624 aa20.52■□□□□ 0.88
CLIP2-202ENST00000361545 TBC1D10BQ4KMP7 808 aaPredicted RBP20.52■□□□□ 0.88
CLIP2-202ENST00000361545 EEF2KMTQ96G04 330 aa20.52■□□□□ 0.88
CLIP2-202ENST00000361545 SEPT9Q9UHD8 586 aaPredicted RBP20.52■□□□□ 0.88
CLIP2-202ENST00000361545 RABGAP1Q9Y3P9 1069 aa20.52■□□□□ 0.88
CLIP2-202ENST00000361545 KCNJ18B7U540 433 aa20.52■□□□□ 0.88
CLIP2-202ENST00000361545 STAT2P52630 851 aa20.52■□□□□ 0.88
CLIP2-202ENST00000361545 PPP2R3AQ06190 1150 aa20.52■□□□□ 0.88
CLIP2-202ENST00000361545 KCNJ12Q14500 433 aa20.52■□□□□ 0.88
CLIP2-202ENST00000361545 FAM160B1Q5W0V3 765 aa20.52■□□□□ 0.88
CLIP2-202ENST00000361545 RAB3IL1Q8TBN0 382 aa20.52■□□□□ 0.88
CLIP2-202ENST00000361545 OSBPL3Q9H4L5 887 aa20.52■□□□□ 0.88
CLIP2-202ENST00000361545 ARMCX3Q9UH62 379 aaPredicted RBP20.52■□□□□ 0.88
CLIP2-202ENST00000361545 ABT1Q9ULW3 272 aaKnown RBP20.52■□□□□ 0.88
CLIP2-202ENST00000361545 CMA1P23946 247 aa20.52■□□□□ 0.87
CLIP2-202ENST00000361545 TBC1D9BQ66K14 1250 aa20.52■□□□□ 0.87
CLIP2-202ENST00000361545 C8orf74Q6P047 294 aa20.52■□□□□ 0.87
CLIP2-202ENST00000361545 TMEM63CQ9P1W3 806 aa20.52■□□□□ 0.87
CLIP2-202ENST00000361545 PALM3A6NDB9 673 aaPredicted RBP20.51■□□□□ 0.87
CLIP2-202ENST00000361545 CLCN1P35523 988 aa20.51■□□□□ 0.87
CLIP2-202ENST00000361545 MORC3Q14149 939 aa20.51■□□□□ 0.87
CLIP2-202ENST00000361545 Q3C1V9 767 aa20.51■□□□□ 0.87
CLIP2-202ENST00000361545 ARMCX5Q6P1M9 558 aa20.51■□□□□ 0.87
CLIP2-202ENST00000361545 RNF26Q9BY78 433 aaPredicted RBP20.51■□□□□ 0.87
CLIP2-202ENST00000361545 XPO4Q9C0E2 1151 aaKnown RBP20.51■□□□□ 0.87
CLIP2-202ENST00000361545 MYCP01106 439 aaPredicted RBP20.51■□□□□ 0.87
CLIP2-202ENST00000361545 EVCP57679 992 aa20.51■□□□□ 0.87
CLIP2-202ENST00000361545 GPR161Q8N6U8 529 aaKnown RBP20.51■□□□□ 0.87
CLIP2-202ENST00000361545 MED10Q9BTT4 135 aa20.51■□□□□ 0.87
CLIP2-202ENST00000361545 APOL6Q9BWW8 343 aa20.51■□□□□ 0.87
CLIP2-202ENST00000361545 PCDHA4Q9UN74 947 aa20.51■□□□□ 0.87
CLIP2-202ENST00000361545 EPHA10Q5JZY3 1008 aa20.51■□□□□ 0.87
CLIP2-202ENST00000361545 GJA10Q969M2 543 aa20.51■□□□□ 0.87
CLIP2-202ENST00000361545 CEP63Q96MT8 703 aa20.51■□□□□ 0.87
CLIP2-202ENST00000361545 ABL1P00519 1130 aa20.51■□□□□ 0.87
CLIP2-202ENST00000361545 TNNC2P02585 160 aa20.51■□□□□ 0.87
CLIP2-202ENST00000361545 ADKP55263 362 aaKnown RBP20.51■□□□□ 0.87
CLIP2-202ENST00000361545 HS1BP3Q53T59 392 aa20.51■□□□□ 0.87
CLIP2-202ENST00000361545 KRBA2Q6ZNG9 492 aa20.5■□□□□ 0.87
CLIP2-202ENST00000361545 ARHGEF1Q92888 912 aaKnown RBP20.5■□□□□ 0.87
CLIP2-202ENST00000361545 COL15A1P39059 1388 aa20.5■□□□□ 0.87
CLIP2-202ENST00000361545 ZEB2O60315 1214 aa20.5■□□□□ 0.87
CLIP2-202ENST00000361545 FAM26FQ5R3K3 315 aa20.5■□□□□ 0.87
CLIP2-202ENST00000361545 ODR4Q5SWX8 454 aa20.5■□□□□ 0.87
CLIP2-202ENST00000361545 U2AF1L4Q8WU68 220 aaKnown RBP20.5■□□□□ 0.87
CLIP2-202ENST00000361545 CHAMP1Q96JM3 812 aa20.5■□□□□ 0.87
CLIP2-202ENST00000361545 NBPF3Q9H094 633 aa20.5■□□□□ 0.87
CLIP2-202ENST00000361545 ZSWIM5Q9P217 1185 aa20.5■□□□□ 0.87
CLIP2-202ENST00000361545 FMNL1O95466 1100 aaPredicted RBP20.5■□□□□ 0.87
CLIP2-202ENST00000361545 ABCB4P21439 1286 aa20.5■□□□□ 0.87
CLIP2-202ENST00000361545 NDUFA8P51970 172 aa20.5■□□□□ 0.87
CLIP2-202ENST00000361545 STK10O94804 968 aaKnown RBP20.5■□□□□ 0.87
CLIP2-202ENST00000361545 IGKV5-2P06315 115 aa20.5■□□□□ 0.87
CLIP2-202ENST00000361545 IFRD2Q12894 506 aaPredicted RBP20.5■□□□□ 0.87
CLIP2-202ENST00000361545 TTC14Q96N46 770 aa20.5■□□□□ 0.87
CLIP2-202ENST00000361545 FAM193BQ96PV7 902 aaPredicted RBP20.5■□□□□ 0.87
CLIP2-202ENST00000361545 RIOK1Q9BRS2 568 aaKnown RBP20.5■□□□□ 0.87
CLIP2-202ENST00000361545 STAT1P42224 750 aa20.49■□□□□ 0.87
CLIP2-202ENST00000361545 MCAMP43121 646 aa20.49■□□□□ 0.87
CLIP2-202ENST00000361545 YWHAEP62258 255 aaKnown RBP20.49■□□□□ 0.87
CLIP2-202ENST00000361545 TUBB4BP68371 445 aa20.49■□□□□ 0.87
CLIP2-202ENST00000361545 TET3O43151 1660 aa20.49■□□□□ 0.87
CLIP2-202ENST00000361545 RFX1P22670 979 aa20.49■□□□□ 0.87
CLIP2-202ENST00000361545 LONP1P36776 959 aaKnown RBP20.49■□□□□ 0.87
CLIP2-202ENST00000361545 IPO4Q8TEX9 1081 aaKnown RBP20.49■□□□□ 0.87
CLIP2-202ENST00000361545 ASIC3Q9UHC3 531 aa20.49■□□□□ 0.87
CLIP2-202ENST00000361545 RBM6P78332 1123 aaKnown RBP20.49■□□□□ 0.87
CLIP2-202ENST00000361545 C17orf53Q8N3J3 647 aaPredicted RBP20.49■□□□□ 0.87
CLIP2-202ENST00000361545 RGS12O14924 1447 aa20.49■□□□□ 0.87
CLIP2-202ENST00000361545 GTPBP6O43824 516 aaPredicted RBP20.49■□□□□ 0.87
CLIP2-202ENST00000361545 RPN1P04843 607 aaKnown RBP20.49■□□□□ 0.87
CLIP2-202ENST00000361545 IREB2P48200 963 aaKnown RBP20.49■□□□□ 0.87
CLIP2-202ENST00000361545 KLHL7Q8IXQ5 586 aa20.49■□□□□ 0.87
CLIP2-202ENST00000361545 GJD4Q96KN9 370 aaPredicted RBP20.49■□□□□ 0.87
CLIP2-202ENST00000361545 TNS3Q68CZ2 1445 aa20.49■□□□□ 0.87
CLIP2-202ENST00000361545 TMEM191BP0C7N4 346 aa20.48■□□□□ 0.87
CLIP2-202ENST00000361545 ADAM9Q13443 819 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms