RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 PPP2R3AQ06190 1150 aa14.03□□□□□ -0.16
UBA3-202ENST00000361055 TUBB2AQ13885 445 aa14.03□□□□□ -0.16
UBA3-202ENST00000361055 CDKAL1Q5VV42 579 aa14.03□□□□□ -0.16
UBA3-202ENST00000361055 PPFIBP1Q86W92 1011 aa14.03□□□□□ -0.16
UBA3-202ENST00000361055 OGFOD1Q8N543 542 aa14.03□□□□□ -0.16
UBA3-202ENST00000361055 DHX58Q96C10 678 aa14.03□□□□□ -0.16
UBA3-202ENST00000361055 ZDHHC15Q96MV8 337 aa14.03□□□□□ -0.16
UBA3-202ENST00000361055 TUBB2BQ9BVA1 445 aa14.03□□□□□ -0.16
UBA3-202ENST00000361055 RBM28Q9NW13 759 aaKnown RBP14.03□□□□□ -0.16
UBA3-202ENST00000361055 ADD3Q9UEY8 706 aaKnown RBP14.03□□□□□ -0.16
UBA3-202ENST00000361055 HDAC9Q9UKV0 1011 aa14.03□□□□□ -0.16
UBA3-202ENST00000361055 ZBTB12Q9Y330 459 aaPredicted RBP14.03□□□□□ -0.16
UBA3-202ENST00000361055 TNKSO95271 1327 aa14.03□□□□□ -0.16
UBA3-202ENST00000361055 CALM1P0DP23 149 aa14.03□□□□□ -0.16
UBA3-202ENST00000361055 CALM2P0DP24 149 aa14.03□□□□□ -0.16
UBA3-202ENST00000361055 CALM3P0DP25 149 aa14.03□□□□□ -0.16
UBA3-202ENST00000361055 RPS12P25398 132 aaKnown RBP14.03□□□□□ -0.16
UBA3-202ENST00000361055 MMP14P50281 582 aa14.03□□□□□ -0.16
UBA3-202ENST00000361055 DPYDQ12882 1025 aa14.03□□□□□ -0.16
UBA3-202ENST00000361055 FILIP1LQ4L180 1135 aa14.03□□□□□ -0.16
UBA3-202ENST00000361055 JAKMIP3Q5VZ66 844 aa14.03□□□□□ -0.16
UBA3-202ENST00000361055 SH3RF3Q8TEJ3 882 aaPredicted RBP14.03□□□□□ -0.16
UBA3-202ENST00000361055 SDR42E1Q8WUS8 393 aa14.03□□□□□ -0.16
UBA3-202ENST00000361055 ZSCAN10Q96SZ4 725 aaPredicted RBP14.03□□□□□ -0.16
UBA3-202ENST00000361055 UBXN6Q9BZV1 441 aa14.03□□□□□ -0.16
UBA3-202ENST00000361055 CCDC66A2RUB6 948 aa14.02□□□□□ -0.16
UBA3-202ENST00000361055 LRRC10BA6NIK2 292 aa14.02□□□□□ -0.16
UBA3-202ENST00000361055 MINDY4BA8MYZ0 360 aa14.02□□□□□ -0.16
UBA3-202ENST00000361055 FGRP09769 529 aa14.02□□□□□ -0.16
UBA3-202ENST00000361055 TUBB4BP68371 445 aa14.02□□□□□ -0.16
UBA3-202ENST00000361055 CATIPQ7Z7H3 387 aa14.02□□□□□ -0.16
UBA3-202ENST00000361055 SHISA4Q96DD7 197 aa14.02□□□□□ -0.16
UBA3-202ENST00000361055 CCDC51Q96ER9 411 aa14.02□□□□□ -0.16
UBA3-202ENST00000361055 EPSTI1Q96J88 318 aa14.02□□□□□ -0.16
UBA3-202ENST00000361055 ATP8A2Q9NTI2 1148 aa14.02□□□□□ -0.16
UBA3-202ENST00000361055 ADGRG1Q9Y653 693 aa14.02□□□□□ -0.16
UBA3-202ENST00000361055 A0A087X0B3 334 aa14.02□□□□□ -0.17
UBA3-202ENST00000361055 PPP1R3GB7ZBB8 358 aa14.02□□□□□ -0.17
UBA3-202ENST00000361055 TEX33O43247 280 aa14.02□□□□□ -0.17
UBA3-202ENST00000361055 USP17L8P0C7I0 530 aa14.02□□□□□ -0.17
UBA3-202ENST00000361055 RBM5P52756 815 aaKnown RBP eCLIP14.02□□□□□ -0.17
UBA3-202ENST00000361055 RHBDL3P58872 404 aa14.02□□□□□ -0.17
UBA3-202ENST00000361055 RBL2Q08999 1139 aa14.02□□□□□ -0.17
UBA3-202ENST00000361055 ENAHQ8N8S7 591 aaPredicted RBP14.02□□□□□ -0.17
UBA3-202ENST00000361055 IGSF22Q8N9C0 903 aa14.02□□□□□ -0.17
UBA3-202ENST00000361055 PYM1Q9BRP8 204 aaKnown RBP14.02□□□□□ -0.17
UBA3-202ENST00000361055 BRMS1Q9HCU9 246 aa14.02□□□□□ -0.17
UBA3-202ENST00000361055 RNF181Q9P0P0 153 aa14.02□□□□□ -0.17
UBA3-202ENST00000361055 VPS54Q9P1Q0 977 aa14.02□□□□□ -0.17
UBA3-202ENST00000361055 V9GY48 417 aaPredicted RBP14.02□□□□□ -0.17
UBA3-202ENST00000361055 NAV1Q8NEY1 1877 aa14.02□□□□□ -0.17
UBA3-202ENST00000361055 CD44P16070 742 aaKnown RBP14.01□□□□□ -0.17
UBA3-202ENST00000361055 FECHP22830 423 aa14.01□□□□□ -0.17
UBA3-202ENST00000361055 AFMP43652 599 aa14.01□□□□□ -0.17
UBA3-202ENST00000361055 APOBEC3HQ6NTF7 200 aaKnown RBP14.01□□□□□ -0.17
UBA3-202ENST00000361055 CC2D1AQ6P1N0 951 aaPredicted RBP14.01□□□□□ -0.17
UBA3-202ENST00000361055 SYMPKQ92797 1274 aaKnown RBP14.01□□□□□ -0.17
UBA3-202ENST00000361055 TNFRSF25Q93038 417 aa14.01□□□□□ -0.17
UBA3-202ENST00000361055 ST7Q9NRC1 585 aa14.01□□□□□ -0.17
UBA3-202ENST00000361055 ITIH6Q6UXX5 1313 aa14.01□□□□□ -0.17
UBA3-202ENST00000361055 ZNF541Q9H0D2 1346 aa14.01□□□□□ -0.17
UBA3-202ENST00000361055 LAMB1P07942 1786 aa14.01□□□□□ -0.17
UBA3-202ENST00000361055 USP5P45974 858 aa14□□□□□ -0.17
UBA3-202ENST00000361055 TEX35Q5T0J7 233 aa14□□□□□ -0.17
UBA3-202ENST00000361055 RASGRP2Q7LDG7 609 aa14□□□□□ -0.17
UBA3-202ENST00000361055 TEX11Q8IYF3 940 aa14□□□□□ -0.17
UBA3-202ENST00000361055 GOLGA1Q92805 767 aa14□□□□□ -0.17
UBA3-202ENST00000361055 PARD6BQ9BYG5 372 aa14□□□□□ -0.17
UBA3-202ENST00000361055 DCP1AQ9NPI6 582 aaPredicted RBP14□□□□□ -0.17
UBA3-202ENST00000361055 MYH1P12882 1939 aa14□□□□□ -0.17
UBA3-202ENST00000361055 FAM205CA6NFA0 338 aa14□□□□□ -0.17
UBA3-202ENST00000361055 CYP2C19P33261 490 aa14□□□□□ -0.17
UBA3-202ENST00000361055 TXLNAP40222 546 aa14□□□□□ -0.17
UBA3-202ENST00000361055 TROAPQ12815 778 aa14□□□□□ -0.17
UBA3-202ENST00000361055 EARS2Q5JPH6 523 aaKnown RBP14□□□□□ -0.17
UBA3-202ENST00000361055 IFIT1BQ5T764 474 aaKnown RBP14□□□□□ -0.17
UBA3-202ENST00000361055 C9orf131Q5VYM1 1079 aa14□□□□□ -0.17
UBA3-202ENST00000361055 IQCA1Q86XH1 822 aa14□□□□□ -0.17
UBA3-202ENST00000361055 GPC2Q8N158 579 aa14□□□□□ -0.17
UBA3-202ENST00000361055 CCDC12Q8WUD4 166 aaPredicted RBP14□□□□□ -0.17
UBA3-202ENST00000361055 DESI2Q9BSY9 194 aa14□□□□□ -0.17
UBA3-202ENST00000361055 MRPL44Q9H9J2 332 aaKnown RBP14□□□□□ -0.17
UBA3-202ENST00000361055 ARFGAP3Q9NP61 516 aa14□□□□□ -0.17
UBA3-202ENST00000361055 GJA3Q9Y6H8 435 aa14□□□□□ -0.17
UBA3-202ENST00000361055 SYNRGQ9UMZ2 1314 aa14□□□□□ -0.17
UBA3-202ENST00000361055 KIF5CO60282 957 aa13.99□□□□□ -0.17
UBA3-202ENST00000361055 DDAH1O94760 285 aa13.99□□□□□ -0.17
UBA3-202ENST00000361055 TBC1D8O95759 1140 aa13.99□□□□□ -0.17
UBA3-202ENST00000361055 TRAPPC10P48553 1259 aa13.99□□□□□ -0.17
UBA3-202ENST00000361055 ATP2C1P98194 919 aaPredicted RBP13.99□□□□□ -0.17
UBA3-202ENST00000361055 MTF1Q14872 753 aa13.99□□□□□ -0.17
UBA3-202ENST00000361055 CDC42EP5Q6NZY7 148 aa13.99□□□□□ -0.17
UBA3-202ENST00000361055 RAD9BQ6WBX8 426 aa13.99□□□□□ -0.17
UBA3-202ENST00000361055 CNGA4Q8IV77 575 aa13.99□□□□□ -0.17
UBA3-202ENST00000361055 IQUBQ8NA54 791 aa13.99□□□□□ -0.17
UBA3-202ENST00000361055 TGFBRAP1Q8WUH2 860 aa13.99□□□□□ -0.17
UBA3-202ENST00000361055 USP40Q9NVE5 1235 aa13.99□□□□□ -0.17
UBA3-202ENST00000361055 LIMA1Q9UHB6 759 aaKnown RBP13.99□□□□□ -0.17
UBA3-202ENST00000361055 MKRN1Q9UHC7 482 aaKnown RBP13.99□□□□□ -0.17
UBA3-202ENST00000361055 SOWAHDA6NJG2 315 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms